Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_F_M08
(492 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC001526-1|AAH01526.1| 328|Homo sapiens musashi homolog 2 (Dros... 42 9e-04
AC003982-3|AAB95636.1| 362|Homo sapiens WUGSC:H_166H1.2 protein. 39 0.011
AB012851-1|BAA33962.1| 362|Homo sapiens Musashi protein. 39 0.011
D89092-1|BAA24361.1| 301|Homo sapiens hnRNP JKTBP protein. 35 0.18
CR407623-1|CAG28551.1| 420|Homo sapiens HNRPDL protein. 35 0.18
BC071944-1|AAH71944.1| 420|Homo sapiens heterogeneous nuclear r... 35 0.18
BC036708-1|AAH36708.1| 332|Homo sapiens heterogeneous nuclear r... 35 0.18
BC011714-1|AAH11714.1| 420|Homo sapiens heterogeneous nuclear r... 35 0.18
BC009359-1|AAH09359.1| 285|Homo sapiens heterogeneous nuclear r... 35 0.18
BC007392-1|AAH07392.2| 415|Homo sapiens HNRPDL protein protein. 35 0.18
BC004561-1|AAH04561.1| 285|Homo sapiens heterogeneous nuclear r... 35 0.18
BC002625-1|AAH02625.1| 285|Homo sapiens heterogeneous nuclear r... 35 0.18
BC001616-1|AAH01616.1| 285|Homo sapiens heterogeneous nuclear r... 35 0.18
AY453824-1|AAR17782.1| 298|Homo sapiens CArG binding factor pro... 35 0.18
AK223425-1|BAD97145.1| 332|Homo sapiens heterogeneous nuclear r... 35 0.18
AK097657-1|BAC05134.1| 332|Homo sapiens protein ( Homo sapiens ... 35 0.18
AC124016-2|AAY40914.1| 420|Homo sapiens unknown protein. 35 0.18
AB066484-1|BAB62188.1| 244|Homo sapiens JKTBP1delta6 protein. 35 0.18
AB017019-1|BAA75241.1| 420|Homo sapiens JKTBP2 protein. 35 0.18
AB017018-2|BAA75240.1| 301|Homo sapiens JKTBP1 protein. 35 0.18
AB017018-1|BAA75239.1| 420|Homo sapiens JKTBP2 protein. 35 0.18
U02019-1|AAC50056.1| 286|Homo sapiens p37 AUF1 protein. 34 0.31
U76713-1|AAC50956.1| 331|Homo sapiens ABBP-1 protein. 33 0.41
M65028-1|AAA36575.1| 284|Homo sapiens hnRNP type A/B protein pr... 33 0.41
AK093888-1|BAC04244.1| 251|Homo sapiens protein ( Homo sapiens ... 33 0.71
D55671-1|BAA09522.1| 267|Homo sapiens heterogeneous nuclear rib... 32 1.2
BC109258-1|AAI09259.1| 560|Homo sapiens ATH1, acid trehalase-li... 32 1.2
BC109257-1|AAI09258.1| 560|Homo sapiens ATH1, acid trehalase-li... 32 1.2
AK090428-1|BAC03409.1| 339|Homo sapiens FLJ00345 protein protein. 32 1.2
AF026126-3|AAC23476.1| 336|Homo sapiens heterogeneous nuclear r... 32 1.2
M61199-1|AAB00773.1| 249|Homo sapiens cleavage signal 1 protein... 31 1.6
BC017282-1|AAH17282.1| 860|Homo sapiens THRAP5 protein protein. 31 2.2
BC011841-1|AAH11841.1| 841|Homo sapiens THRAP5 protein protein. 31 2.2
BC007853-1|AAH07853.2| 504|Homo sapiens THRAP5 protein protein. 31 2.2
BC004554-1|AAH04554.1| 841|Homo sapiens THRAP5 protein protein. 31 2.2
AL137077-6|CAI11049.1| 296|Homo sapiens LSM14 homolog B (SCD6, ... 31 2.2
AL137077-5|CAI11048.1| 223|Homo sapiens LSM14 homolog B (SCD6, ... 31 2.2
AF121228-1|AAD30032.1| 877|Homo sapiens thyroid hormone recepto... 31 2.2
AF106934-1|AAD31087.1| 873|Homo sapiens vitamin D receptor-inte... 31 2.2
U80918-1|AAD00451.1| 930|Homo sapiens transcription factor prot... 31 2.9
BC067820-1|AAH67820.1| 434|Homo sapiens INPP5F protein protein. 31 2.9
AK128214-1|BAC87330.1| 1508|Homo sapiens protein ( Homo sapiens ... 30 3.8
U80919-1|AAD00452.1| 353|Homo sapiens transcription factor prot... 30 5.0
U80917-1|AAD00450.1| 825|Homo sapiens transcription factor prot... 30 5.0
U59736-1|AAC50869.1| 812|Homo sapiens NFATc.b protein. 30 5.0
BC133040-1|AAI33041.1| 102|Homo sapiens chromosome 10 open read... 30 5.0
BC133038-1|AAI33039.1| 102|Homo sapiens chromosome 10 open read... 30 5.0
AL607085-1|CAI15165.1| 102|Homo sapiens novel protein (FLJ40354... 30 5.0
D86974-1|BAA13210.2| 884|Homo sapiens KIAA0220 protein. 29 6.6
D86967-1|BAA13203.2| 666|Homo sapiens KIAA0212 protein. 29 6.6
BC094882-1|AAH94882.1| 739|Homo sapiens DKFZp547E087 protein pr... 29 6.6
BC073943-1|AAH73943.1| 361|Homo sapiens DKFZp547E087 protein pr... 29 6.6
BC061522-1|AAH61522.1| 420|Homo sapiens DKFZp547E087 protein pr... 29 6.6
BC036263-1|AAH36263.1| 678|Homo sapiens LOC23117 protein protein. 29 6.6
BC019088-1|AAH19088.1| 657|Homo sapiens ER degradation enhancer... 29 6.6
BC016681-1|AAH16681.1| 473|Homo sapiens BRSK1 protein protein. 29 6.6
AY505124-1|AAS86442.1| 778|Homo sapiens protein kinase SAD-B pr... 29 6.6
AY476736-1|AAS58324.1| 244|Homo sapiens heparan sulfate 3-O-sul... 29 6.6
AY458602-1|AAS10354.1| 778|Homo sapiens SAD1 kinase protein. 29 6.6
AL049853-3|CAI22452.1| 219|Homo sapiens novel transcript protein. 29 6.6
AK128772-1|BAC87606.1| 834|Homo sapiens protein ( Homo sapiens ... 29 6.6
AF479827-1|AAL87698.1| 778|Homo sapiens protein kinase-like pro... 29 6.6
AF479826-1|AAL87697.1| 794|Homo sapiens putative serine/threoni... 29 6.6
AF105378-1|AAD30210.2| 456|Homo sapiens heparan sulfate 3-O-sul... 29 6.6
AB209632-1|BAD92869.1| 854|Homo sapiens PI-3-kinase-related kin... 29 6.6
AB058714-1|BAB47440.1| 715|Homo sapiens KIAA1811 protein protein. 29 6.6
AL049853-2|CAO72108.1| 74|Homo sapiens novel transcript protein. 29 8.8
>BC001526-1|AAH01526.1| 328|Homo sapiens musashi homolog 2
(Drosophila) protein.
Length = 328
Score = 42.3 bits (95), Expect = 9e-04
Identities = 17/29 (58%), Positives = 22/29 (75%)
Frame = +2
Query: 146 NQDVARSPAEVPNDPGKMFVGGLSWQTSP 232
+Q + S + +DPGKMF+GGLSWQTSP
Sbjct: 6 SQGTSGSANDSQHDPGKMFIGGLSWQTSP 34
>AC003982-3|AAB95636.1| 362|Homo sapiens WUGSC:H_166H1.2 protein.
Length = 362
Score = 38.7 bits (86), Expect = 0.011
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = +2
Query: 134 METQNQDVARSPAEVPNDPGKMFVGGLSWQTS 229
MET + + P+DP KMF+GGLSWQT+
Sbjct: 1 METDAPQPGLASPDSPHDPCKMFIGGLSWQTT 32
>AB012851-1|BAA33962.1| 362|Homo sapiens Musashi protein.
Length = 362
Score = 38.7 bits (86), Expect = 0.011
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = +2
Query: 134 METQNQDVARSPAEVPNDPGKMFVGGLSWQTS 229
MET + + P+DP KMF+GGLSWQT+
Sbjct: 1 METDAPQPGLASPDSPHDPCKMFIGGLSWQTT 32
>D89092-1|BAA24361.1| 301|Homo sapiens hnRNP JKTBP protein.
Length = 301
Score = 34.7 bits (76), Expect = 0.18
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +2
Query: 185 DPGKMFVGGLSWQTSPGKSSKDISEEQRKAARSL-CGHVTEPLWG 316
D GKMF+GGLSW T S KD++E + + C T+P+ G
Sbjct: 27 DDGKMFIGGLSWDT----SKKDLTEYLSRFGEVVDCTIKTDPVTG 67
>CR407623-1|CAG28551.1| 420|Homo sapiens HNRPDL protein.
Length = 420
Score = 34.7 bits (76), Expect = 0.18
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +2
Query: 185 DPGKMFVGGLSWQTSPGKSSKDISEEQRKAARSL-CGHVTEPLWG 316
D GKMF+GGLSW T S KD++E + + C T+P+ G
Sbjct: 146 DDGKMFIGGLSWDT----SKKDLTEYLSRFGEVVDCTIKTDPVTG 186
>BC071944-1|AAH71944.1| 420|Homo sapiens heterogeneous nuclear
ribonucleoprotein D-like protein.
Length = 420
Score = 34.7 bits (76), Expect = 0.18
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +2
Query: 185 DPGKMFVGGLSWQTSPGKSSKDISEEQRKAARSL-CGHVTEPLWG 316
D GKMF+GGLSW T S KD++E + + C T+P+ G
Sbjct: 146 DDGKMFIGGLSWDT----SKKDLTEYLSRFGEVVDCTIKTDPVTG 186
>BC036708-1|AAH36708.1| 332|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 332
Score = 34.7 bits (76), Expect = 0.18
Identities = 24/82 (29%), Positives = 32/82 (39%)
Frame = +2
Query: 5 RPMSLVPVVGSAAERLREPSPTAYRSIVVVVPTGSHRVPAPSPMETQNQDVARSPAEVPN 184
+PM + E + E A G PS + + + ++
Sbjct: 8 QPMETTGATENGHEAVPEGESPAGAGTGAAAGAGGATAAPPSGNQNGAEGDQINASKNEE 67
Query: 185 DPGKMFVGGLSWQTSPGKSSKD 250
D GKMFVGGLSW TS K KD
Sbjct: 68 DAGKMFVGGLSWDTSK-KDLKD 88
>BC011714-1|AAH11714.1| 420|Homo sapiens heterogeneous nuclear
ribonucleoprotein D-like protein.
Length = 420
Score = 34.7 bits (76), Expect = 0.18
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +2
Query: 185 DPGKMFVGGLSWQTSPGKSSKDISEEQRKAARSL-CGHVTEPLWG 316
D GKMF+GGLSW T S KD++E + + C T+P+ G
Sbjct: 146 DDGKMFIGGLSWDT----SKKDLTEYLSRFGEVVDCTIKTDPVTG 186
>BC009359-1|AAH09359.1| 285|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 285
Score = 34.7 bits (76), Expect = 0.18
Identities = 24/82 (29%), Positives = 32/82 (39%)
Frame = +2
Query: 5 RPMSLVPVVGSAAERLREPSPTAYRSIVVVVPTGSHRVPAPSPMETQNQDVARSPAEVPN 184
+PM + E + E A G PS + + + ++
Sbjct: 8 QPMETTGATENGHEAVPEGESPAGAGTGAAAGAGGATAAPPSGNQNGAEGDQINASKNEE 67
Query: 185 DPGKMFVGGLSWQTSPGKSSKD 250
D GKMFVGGLSW TS K KD
Sbjct: 68 DAGKMFVGGLSWDTSK-KDLKD 88
>BC007392-1|AAH07392.2| 415|Homo sapiens HNRPDL protein protein.
Length = 415
Score = 34.7 bits (76), Expect = 0.18
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +2
Query: 185 DPGKMFVGGLSWQTSPGKSSKDISEEQRKAARSL-CGHVTEPLWG 316
D GKMF+GGLSW T S KD++E + + C T+P+ G
Sbjct: 141 DDGKMFIGGLSWDT----SKKDLTEYLSRFGEVVDCTIKTDPVTG 181
>BC004561-1|AAH04561.1| 285|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 285
Score = 34.7 bits (76), Expect = 0.18
Identities = 24/82 (29%), Positives = 32/82 (39%)
Frame = +2
Query: 5 RPMSLVPVVGSAAERLREPSPTAYRSIVVVVPTGSHRVPAPSPMETQNQDVARSPAEVPN 184
+PM + E + E A G PS + + + ++
Sbjct: 8 QPMETTGATENGHEAVPEGESPAGAGTGAAAGAGGATAAPPSGNQNGAEGDQINASKNEE 67
Query: 185 DPGKMFVGGLSWQTSPGKSSKD 250
D GKMFVGGLSW TS K KD
Sbjct: 68 DAGKMFVGGLSWDTSK-KDLKD 88
>BC002625-1|AAH02625.1| 285|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 285
Score = 34.7 bits (76), Expect = 0.18
Identities = 24/82 (29%), Positives = 32/82 (39%)
Frame = +2
Query: 5 RPMSLVPVVGSAAERLREPSPTAYRSIVVVVPTGSHRVPAPSPMETQNQDVARSPAEVPN 184
+PM + E + E A G PS + + + ++
Sbjct: 8 QPMETTGATENGHEAVPEGESPAGAGTGAAAGAGGATAAPPSGNQNGAEGDQINASKNEE 67
Query: 185 DPGKMFVGGLSWQTSPGKSSKD 250
D GKMFVGGLSW TS K KD
Sbjct: 68 DAGKMFVGGLSWDTSK-KDLKD 88
>BC001616-1|AAH01616.1| 285|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 285
Score = 34.7 bits (76), Expect = 0.18
Identities = 24/82 (29%), Positives = 32/82 (39%)
Frame = +2
Query: 5 RPMSLVPVVGSAAERLREPSPTAYRSIVVVVPTGSHRVPAPSPMETQNQDVARSPAEVPN 184
+PM + E + E A G PS + + + ++
Sbjct: 8 QPMETTGATENGHEAVPEGESPAGAGTGAAAGAGGATAAPPSGNQNGAEGDQINASKNEE 67
Query: 185 DPGKMFVGGLSWQTSPGKSSKD 250
D GKMFVGGLSW TS K KD
Sbjct: 68 DAGKMFVGGLSWDTSK-KDLKD 88
>AY453824-1|AAR17782.1| 298|Homo sapiens CArG binding factor
protein.
Length = 298
Score = 34.7 bits (76), Expect = 0.18
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +2
Query: 185 DPGKMFVGGLSWQTSPGKSSKDISEEQRKAARSL-CGHVTEPLWG 316
D GKMF+GGLSW T S KD++E + + C T+P+ G
Sbjct: 24 DDGKMFIGGLSWDT----SKKDLTEYLSRFGEVVDCTIKTDPVTG 64
>AK223425-1|BAD97145.1| 332|Homo sapiens heterogeneous nuclear
ribonucleoprotein AB isoform a variant protein.
Length = 332
Score = 34.7 bits (76), Expect = 0.18
Identities = 24/82 (29%), Positives = 32/82 (39%)
Frame = +2
Query: 5 RPMSLVPVVGSAAERLREPSPTAYRSIVVVVPTGSHRVPAPSPMETQNQDVARSPAEVPN 184
+PM + E + E A G PS + + + ++
Sbjct: 8 QPMETTGATENGHEAVPEGESPAGAGTGAAAGAGGATAAPPSGNQNGAEGDQINASKNEE 67
Query: 185 DPGKMFVGGLSWQTSPGKSSKD 250
D GKMFVGGLSW TS K KD
Sbjct: 68 DAGKMFVGGLSWDTSK-KDLKD 88
>AK097657-1|BAC05134.1| 332|Homo sapiens protein ( Homo sapiens
cDNA FLJ40338 fis, clone TESTI2032067, highly similar to
Rattus norvegicus mRNA for type A/B hnRNP protein p40.
).
Length = 332
Score = 34.7 bits (76), Expect = 0.18
Identities = 24/82 (29%), Positives = 32/82 (39%)
Frame = +2
Query: 5 RPMSLVPVVGSAAERLREPSPTAYRSIVVVVPTGSHRVPAPSPMETQNQDVARSPAEVPN 184
+PM + E + E A G PS + + + ++
Sbjct: 8 QPMETTGATENGHEAVPEGESPAGAGTGAAAGAGGATAAPPSGNQNGAEGDQINASKNEE 67
Query: 185 DPGKMFVGGLSWQTSPGKSSKD 250
D GKMFVGGLSW TS K KD
Sbjct: 68 DAGKMFVGGLSWDTSK-KDLKD 88
>AC124016-2|AAY40914.1| 420|Homo sapiens unknown protein.
Length = 420
Score = 34.7 bits (76), Expect = 0.18
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +2
Query: 185 DPGKMFVGGLSWQTSPGKSSKDISEEQRKAARSL-CGHVTEPLWG 316
D GKMF+GGLSW T S KD++E + + C T+P+ G
Sbjct: 146 DDGKMFIGGLSWDT----SKKDLTEYLSRFGEVVDCTIKTDPVTG 186
>AB066484-1|BAB62188.1| 244|Homo sapiens JKTBP1delta6 protein.
Length = 244
Score = 34.7 bits (76), Expect = 0.18
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +2
Query: 185 DPGKMFVGGLSWQTSPGKSSKDISEEQRKAARSL-CGHVTEPLWG 316
D GKMF+GGLSW T S KD++E + + C T+P+ G
Sbjct: 27 DDGKMFIGGLSWDT----SKKDLTEYLSRFGEVVDCTIKTDPVTG 67
>AB017019-1|BAA75241.1| 420|Homo sapiens JKTBP2 protein.
Length = 420
Score = 34.7 bits (76), Expect = 0.18
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +2
Query: 185 DPGKMFVGGLSWQTSPGKSSKDISEEQRKAARSL-CGHVTEPLWG 316
D GKMF+GGLSW T S KD++E + + C T+P+ G
Sbjct: 146 DDGKMFIGGLSWDT----SKKDLTEYLSRFGEVVDCTIKTDPVTG 186
>AB017018-2|BAA75240.1| 301|Homo sapiens JKTBP1 protein.
Length = 301
Score = 34.7 bits (76), Expect = 0.18
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +2
Query: 185 DPGKMFVGGLSWQTSPGKSSKDISEEQRKAARSL-CGHVTEPLWG 316
D GKMF+GGLSW T S KD++E + + C T+P+ G
Sbjct: 27 DDGKMFIGGLSWDT----SKKDLTEYLSRFGEVVDCTIKTDPVTG 67
>AB017018-1|BAA75239.1| 420|Homo sapiens JKTBP2 protein.
Length = 420
Score = 34.7 bits (76), Expect = 0.18
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +2
Query: 185 DPGKMFVGGLSWQTSPGKSSKDISEEQRKAARSL-CGHVTEPLWG 316
D GKMF+GGLSW T S KD++E + + C T+P+ G
Sbjct: 146 DDGKMFIGGLSWDT----SKKDLTEYLSRFGEVVDCTIKTDPVTG 186
>U02019-1|AAC50056.1| 286|Homo sapiens p37 AUF1 protein.
Length = 286
Score = 33.9 bits (74), Expect = 0.31
Identities = 21/52 (40%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +2
Query: 98 PTGSHRVPAPS-PMETQNQDVARSPAEVPNDPGKMFVGGLSWQTSPGKSSKD 250
P R+ AP E++ + S E D GKMF+GGLSW T+ K KD
Sbjct: 46 PGAEPRLEAPKGSAESEGAKIDASKNE--EDEGKMFIGGLSWDTTK-KDLKD 94
>U76713-1|AAC50956.1| 331|Homo sapiens ABBP-1 protein.
Length = 331
Score = 33.5 bits (73), Expect = 0.41
Identities = 16/22 (72%), Positives = 16/22 (72%)
Frame = +2
Query: 185 DPGKMFVGGLSWQTSPGKSSKD 250
D GKMFVGGLSW TS K KD
Sbjct: 66 DAGKMFVGGLSWDTSK-KDLKD 86
>M65028-1|AAA36575.1| 284|Homo sapiens hnRNP type A/B protein
protein.
Length = 284
Score = 33.5 bits (73), Expect = 0.41
Identities = 16/22 (72%), Positives = 16/22 (72%)
Frame = +2
Query: 185 DPGKMFVGGLSWQTSPGKSSKD 250
D GKMFVGGLSW TS K KD
Sbjct: 66 DAGKMFVGGLSWDTSK-KDLKD 86
>AK093888-1|BAC04244.1| 251|Homo sapiens protein ( Homo sapiens
cDNA FLJ36569 fis, clone TRACH2010824, highly similar to
Ribonucleoprotein. ).
Length = 251
Score = 32.7 bits (71), Expect = 0.71
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +2
Query: 194 KMFVGGLSWQTSP 232
KMF+GGLSWQTSP
Sbjct: 18 KMFIGGLSWQTSP 30
>D55671-1|BAA09522.1| 267|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (hnRNP D) protein.
Length = 267
Score = 31.9 bits (69), Expect = 1.2
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +2
Query: 185 DPGKMFVGGLSWQTSPGKSSKD 250
D GKMF+GGLSW T+ K KD
Sbjct: 7 DEGKMFIGGLSWDTTK-KDLKD 27
>BC109258-1|AAI09259.1| 560|Homo sapiens ATH1, acid trehalase-like
1 (yeast) protein.
Length = 560
Score = 31.9 bits (69), Expect = 1.2
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 6/73 (8%)
Frame = -1
Query: 315 PHSGSVTWPQRDRAAFLCSSEMSFDDLPGLVCQLSPP------TNIFPGSLGTSAGLRAT 154
PH + WP + R + L ++SF G + Q+SPP ++ FPG +
Sbjct: 479 PHLEAELWPSQSRLSLLPGHKVSFPRSAGRI-QMSPPKLPGSSSSEFPGRTFSDVRDPLQ 537
Query: 153 SWFWVSMGLGAGT 115
S WV++G + T
Sbjct: 538 SPLWVTLGSSSPT 550
>BC109257-1|AAI09258.1| 560|Homo sapiens ATH1, acid trehalase-like
1 (yeast) protein.
Length = 560
Score = 31.9 bits (69), Expect = 1.2
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 6/73 (8%)
Frame = -1
Query: 315 PHSGSVTWPQRDRAAFLCSSEMSFDDLPGLVCQLSPP------TNIFPGSLGTSAGLRAT 154
PH + WP + R + L ++SF G + Q+SPP ++ FPG +
Sbjct: 479 PHLEAELWPSQSRLSLLPGHKVSFPRSAGRI-QMSPPKLPGSSSSEFPGRTFSDVRDPLQ 537
Query: 153 SWFWVSMGLGAGT 115
S WV++G + T
Sbjct: 538 SPLWVTLGSSSPT 550
>AK090428-1|BAC03409.1| 339|Homo sapiens FLJ00345 protein protein.
Length = 339
Score = 31.9 bits (69), Expect = 1.2
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 6/73 (8%)
Frame = -1
Query: 315 PHSGSVTWPQRDRAAFLCSSEMSFDDLPGLVCQLSPP------TNIFPGSLGTSAGLRAT 154
PH + WP + R + L ++SF G + Q+SPP ++ FPG +
Sbjct: 258 PHLEAELWPSQSRLSLLPGHKVSFPRSAGRI-QMSPPKLPGSSSSEFPGRTFSDVRDPLQ 316
Query: 153 SWFWVSMGLGAGT 115
S WV++G + T
Sbjct: 317 SPLWVTLGSSSPT 329
>AF026126-3|AAC23476.1| 336|Homo sapiens heterogeneous nuclear
ribonucleoprotein D protein.
Length = 336
Score = 31.9 bits (69), Expect = 1.2
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +2
Query: 185 DPGKMFVGGLSWQTSPGKSSKD 250
D GKMF+GGLSW T+ K KD
Sbjct: 76 DEGKMFIGGLSWDTTK-KDLKD 96
>M61199-1|AAB00773.1| 249|Homo sapiens cleavage signal 1 protein
protein.
Length = 249
Score = 31.5 bits (68), Expect = 1.6
Identities = 21/85 (24%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Frame = +2
Query: 50 LREPSPTAYRSIVVVVPTGSH---RVPAPSPMETQNQ--DVARSPAEVPNDPGKMFVGGL 214
+R PSP +RS ++ GS + PSP+ ++ + + + ++ G + +G +
Sbjct: 24 VRMPSP--FRSSALMGMCGSRSTDNLSCPSPLNVMEPVTELMQEQSYLKSELG-LGLGEM 80
Query: 215 SWQTSPGKSSKDISEEQRKAARSLC 289
++ PG+SS+ + +QR + S+C
Sbjct: 81 GFEIPPGESSESVFSKQRSESSSIC 105
>BC017282-1|AAH17282.1| 860|Homo sapiens THRAP5 protein protein.
Length = 860
Score = 31.1 bits (67), Expect = 2.2
Identities = 19/62 (30%), Positives = 28/62 (45%)
Frame = -3
Query: 322 TSTPQRLSHVAAKRPRCFPLLLRDVFRRFTWTSLPAESSDEHLPRVVRHLCGASGHILVL 143
++ P+ + A KRPR + + +WTSL D H V L + GH L +
Sbjct: 408 SAAPRPVDEPAMKRPRTAGPAVHLKAMQLSWTSLALVGIDSHGKLSVLRLSPSMGHPLEV 467
Query: 142 GL 137
GL
Sbjct: 468 GL 469
>BC011841-1|AAH11841.1| 841|Homo sapiens THRAP5 protein protein.
Length = 841
Score = 31.1 bits (67), Expect = 2.2
Identities = 19/62 (30%), Positives = 28/62 (45%)
Frame = -3
Query: 322 TSTPQRLSHVAAKRPRCFPLLLRDVFRRFTWTSLPAESSDEHLPRVVRHLCGASGHILVL 143
++ P+ + A KRPR + + +WTSL D H V L + GH L +
Sbjct: 408 SAAPRPVDEPAMKRPRTAGPAVHLKAMQLSWTSLALVGIDSHGKLSVLRLSPSMGHPLEV 467
Query: 142 GL 137
GL
Sbjct: 468 GL 469
>BC007853-1|AAH07853.2| 504|Homo sapiens THRAP5 protein protein.
Length = 504
Score = 31.1 bits (67), Expect = 2.2
Identities = 19/62 (30%), Positives = 28/62 (45%)
Frame = -3
Query: 322 TSTPQRLSHVAAKRPRCFPLLLRDVFRRFTWTSLPAESSDEHLPRVVRHLCGASGHILVL 143
++ P+ + A KRPR + + +WTSL D H V L + GH L +
Sbjct: 161 SAAPRPVDEPAMKRPRTAGPAVHLKAMQLSWTSLALVGIDSHGKLSVLRLSPSMGHPLEV 220
Query: 142 GL 137
GL
Sbjct: 221 GL 222
>BC004554-1|AAH04554.1| 841|Homo sapiens THRAP5 protein protein.
Length = 841
Score = 31.1 bits (67), Expect = 2.2
Identities = 19/62 (30%), Positives = 28/62 (45%)
Frame = -3
Query: 322 TSTPQRLSHVAAKRPRCFPLLLRDVFRRFTWTSLPAESSDEHLPRVVRHLCGASGHILVL 143
++ P+ + A KRPR + + +WTSL D H V L + GH L +
Sbjct: 408 SAAPRPVDEPAMKRPRTAGPAVHLKAMQLSWTSLALVGIDSHGKLSVLRLSPSMGHPLEV 467
Query: 142 GL 137
GL
Sbjct: 468 GL 469
>AL137077-6|CAI11049.1| 296|Homo sapiens LSM14 homolog B (SCD6, S.
cerevisiae) protein.
Length = 296
Score = 31.1 bits (67), Expect = 2.2
Identities = 31/77 (40%), Positives = 40/77 (51%), Gaps = 7/77 (9%)
Frame = -1
Query: 213 SPPTNIFP-GSLGTSAGLRATSWFWVSMGLGAGTRCEPVGTTTTIERYAVGDGSRSRSAA 37
SP + P G L S+ L + + S+GLGAG PVG + +E+ AV GS A
Sbjct: 141 SPFRGMAPYGPLAASSLL--SQQYAASLGLGAGFPSIPVGKSPMVEQ-AVQTGSADNLNA 197
Query: 36 ---LP---TTGTRLIGR 4
LP TTGT+L GR
Sbjct: 198 KKLLPGKGTTGTQLNGR 214
>AL137077-5|CAI11048.1| 223|Homo sapiens LSM14 homolog B (SCD6, S.
cerevisiae) protein.
Length = 223
Score = 31.1 bits (67), Expect = 2.2
Identities = 31/77 (40%), Positives = 40/77 (51%), Gaps = 7/77 (9%)
Frame = -1
Query: 213 SPPTNIFP-GSLGTSAGLRATSWFWVSMGLGAGTRCEPVGTTTTIERYAVGDGSRSRSAA 37
SP + P G L S+ L + + S+GLGAG PVG + +E+ AV GS A
Sbjct: 115 SPFRGMAPYGPLAASSLL--SQQYAASLGLGAGFPSIPVGKSPMVEQ-AVQTGSADNLNA 171
Query: 36 ---LP---TTGTRLIGR 4
LP TTGT+L GR
Sbjct: 172 KKLLPGKGTTGTQLNGR 188
>AF121228-1|AAD30032.1| 877|Homo sapiens thyroid hormone
receptor-associated protein complex component TRAP95
protein.
Length = 877
Score = 31.1 bits (67), Expect = 2.2
Identities = 19/62 (30%), Positives = 28/62 (45%)
Frame = -3
Query: 322 TSTPQRLSHVAAKRPRCFPLLLRDVFRRFTWTSLPAESSDEHLPRVVRHLCGASGHILVL 143
++ P+ + A KRPR + + +WTSL D H V L + GH L +
Sbjct: 408 SAAPKPVDEPAMKRPRTAGPAVHLKAMQLSWTSLALVGIDSHGKLSVLRLSPSMGHPLEV 467
Query: 142 GL 137
GL
Sbjct: 468 GL 469
>AF106934-1|AAD31087.1| 873|Homo sapiens vitamin D
receptor-interacting protein protein.
Length = 873
Score = 31.1 bits (67), Expect = 2.2
Identities = 19/62 (30%), Positives = 28/62 (45%)
Frame = -3
Query: 322 TSTPQRLSHVAAKRPRCFPLLLRDVFRRFTWTSLPAESSDEHLPRVVRHLCGASGHILVL 143
++ P+ + A KRPR + + +WTSL D H V L + GH L +
Sbjct: 408 SAAPRPVDEPAMKRPRTAGPAVHLKAMQLSWTSLALVGIDSHGKLSVLRLSPSMGHPLEV 467
Query: 142 GL 137
GL
Sbjct: 468 GL 469
>U80918-1|AAD00451.1| 930|Homo sapiens transcription factor
protein.
Length = 930
Score = 30.7 bits (66), Expect = 2.9
Identities = 25/78 (32%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Frame = +2
Query: 14 SLVPVVGSAAERLREPSPTAYRSIVVVVPTGSHR-VPAPSPMETQNQDVARSPAEVPNDP 190
+L+P + +L + SP AY V P H +P P+ QDV R A P P
Sbjct: 743 TLMPAAPGVSPKLHDLSPAAYTK-GVASPGHCHLGLPQPAGEAPAVQDVPRPVATHPGSP 801
Query: 191 GKMFVGGLSWQTSPGKSS 244
G+ L Q S SS
Sbjct: 802 GQPPPALLPQQVSAPPSS 819
>BC067820-1|AAH67820.1| 434|Homo sapiens INPP5F protein protein.
Length = 434
Score = 30.7 bits (66), Expect = 2.9
Identities = 20/64 (31%), Positives = 30/64 (46%)
Frame = -1
Query: 213 SPPTNIFPGSLGTSAGLRATSWFWVSMGLGAGTRCEPVGTTTTIERYAVGDGSRSRSAAL 34
SPPT P + ++A R S+ G G+G + +G R A G+R + AL
Sbjct: 5 SPPTGRVPRGVPSAAASRRGSYPAAPRGAGSG-GLDRLGRPVRRPRAAASLGARGQHGAL 63
Query: 33 PTTG 22
P+ G
Sbjct: 64 PSQG 67
>AK128214-1|BAC87330.1| 1508|Homo sapiens protein ( Homo sapiens cDNA
FLJ46346 fis, clone TESTI4047328, moderately similar to
Mus musculus otogelin (Otog). ).
Length = 1508
Score = 30.3 bits (65), Expect = 3.8
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = -1
Query: 315 PHSGSVTWPQRDRAAFLCSSEMS--FDDLPGLVCQLSPPTNIFPGSLGTSAGL 163
P + +T P + +A L + +S P + Q PPT+I P + GT+ GL
Sbjct: 842 PKASVITTPLQPQATTLPAQTLSPVLPFTPAAMTQAHPPTHIAPPAAGTAPGL 894
>U80919-1|AAD00452.1| 353|Homo sapiens transcription factor
protein.
Length = 353
Score = 29.9 bits (64), Expect = 5.0
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = +2
Query: 14 SLVPVVGSAAERLREPSPTAYRSIVVVVPTGSHR-VPAPSPMETQNQDVARSPAEVPNDP 190
+L+P + +L + SP AY V P H +P P+ QDV R A P P
Sbjct: 284 TLMPAAPGVSPKLHDLSPAAYTK-GVASPGHCHLGLPQPAGEAPAVQDVPRPVATHPGSP 342
Query: 191 GK 196
G+
Sbjct: 343 GQ 344
>U80917-1|AAD00450.1| 825|Homo sapiens transcription factor
protein.
Length = 825
Score = 29.9 bits (64), Expect = 5.0
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = +2
Query: 14 SLVPVVGSAAERLREPSPTAYRSIVVVVPTGSHR-VPAPSPMETQNQDVARSPAEVPNDP 190
+L+P + +L + SP AY V P H +P P+ QDV R A P P
Sbjct: 756 TLMPAAPGVSPKLHDLSPAAYTK-GVASPGHCHLGLPQPAGEAPAVQDVPRPVATHPGSP 814
Query: 191 GK 196
G+
Sbjct: 815 GQ 816
>U59736-1|AAC50869.1| 812|Homo sapiens NFATc.b protein.
Length = 812
Score = 29.9 bits (64), Expect = 5.0
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = +2
Query: 14 SLVPVVGSAAERLREPSPTAYRSIVVVVPTGSHR-VPAPSPMETQNQDVARSPAEVPNDP 190
+L+P + +L + SP AY V P H +P P+ QDV R A P P
Sbjct: 743 TLMPAAPGVSPKLHDLSPAAYTK-GVASPGHCHLGLPQPAGEAPAVQDVPRPVATHPGSP 801
Query: 191 GK 196
G+
Sbjct: 802 GQ 803
>BC133040-1|AAI33041.1| 102|Homo sapiens chromosome 10 open reading
frame 139 protein.
Length = 102
Score = 29.9 bits (64), Expect = 5.0
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = -1
Query: 180 GTSAGLRATSWFWVSMGLGAGTR 112
G AGLRAT + W+ G GAG R
Sbjct: 4 GAGAGLRATRFRWMRDGAGAGLR 26
>BC133038-1|AAI33039.1| 102|Homo sapiens chromosome 10 open reading
frame 139 protein.
Length = 102
Score = 29.9 bits (64), Expect = 5.0
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = -1
Query: 180 GTSAGLRATSWFWVSMGLGAGTR 112
G AGLRAT + W+ G GAG R
Sbjct: 4 GAGAGLRATRFRWMRDGAGAGLR 26
>AL607085-1|CAI15165.1| 102|Homo sapiens novel protein (FLJ40354
LOC282979) protein.
Length = 102
Score = 29.9 bits (64), Expect = 5.0
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = -1
Query: 180 GTSAGLRATSWFWVSMGLGAGTR 112
G AGLRAT + W+ G GAG R
Sbjct: 4 GAGAGLRATRFRWMRDGAGAGLR 26
>D86974-1|BAA13210.2| 884|Homo sapiens KIAA0220 protein.
Length = 884
Score = 29.5 bits (63), Expect = 6.6
Identities = 26/101 (25%), Positives = 40/101 (39%), Gaps = 1/101 (0%)
Frame = +2
Query: 8 PMSLVPVVGSAAERLREPSPTAYRSIVVVVPTGSHRVPAPSPMETQNQDVARSPAEVPND 187
P S + + AERLR P P + + P + A P + + Q A E P +
Sbjct: 733 PPSADDNIKTPAERLRGPLPPSADDNLKTPPLATQEAEAEKPRKPKRQRAAE--MEPPPE 790
Query: 188 PGKMFVGGLSWQTSP-GKSSKDISEEQRKAARSLCGHVTEP 307
P + VG + P + + D+ + R G V EP
Sbjct: 791 PKRRRVGDVEPSRKPKRRRAADVEPSSPEPKRRRVGDV-EP 830
>D86967-1|BAA13203.2| 666|Homo sapiens KIAA0212 protein.
Length = 666
Score = 29.5 bits (63), Expect = 6.6
Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
Frame = +2
Query: 44 ERLREPS-PTAYRSIVVVVPTGSHRVPAPSPMETQNQDVARSPAEVPNDPGKMFVGGLSW 220
+RLR P P + S V P G V PS ++ A+SP + P PG G +W
Sbjct: 53 QRLRSPDGPASPTSGPVGRPGG---VSGPSWLQPPGTGAAQSPRKAPRRPGPGMCGPANW 109
Query: 221 QTSPGKSSKDISEEQRK 271
G + E +++
Sbjct: 110 GYVLGGRGRGPDEYEKR 126
>BC094882-1|AAH94882.1| 739|Homo sapiens DKFZp547E087 protein
protein.
Length = 739
Score = 29.5 bits (63), Expect = 6.6
Identities = 26/101 (25%), Positives = 40/101 (39%), Gaps = 1/101 (0%)
Frame = +2
Query: 8 PMSLVPVVGSAAERLREPSPTAYRSIVVVVPTGSHRVPAPSPMETQNQDVARSPAEVPND 187
P S + + AERLR P P + + P + A P + + Q A E P +
Sbjct: 588 PPSADDNIKTPAERLRGPLPPSADDNLKTPPLATQEAEAEKPRKPKRQRAAE--MEPPPE 645
Query: 188 PGKMFVGGLSWQTSP-GKSSKDISEEQRKAARSLCGHVTEP 307
P + VG + P + + D+ + R G V EP
Sbjct: 646 PKRRRVGDVEPSRKPKRRRAADVEPSSPEPKRRRVGDV-EP 685
>BC073943-1|AAH73943.1| 361|Homo sapiens DKFZp547E087 protein
protein.
Length = 361
Score = 29.5 bits (63), Expect = 6.6
Identities = 26/101 (25%), Positives = 40/101 (39%), Gaps = 1/101 (0%)
Frame = +2
Query: 8 PMSLVPVVGSAAERLREPSPTAYRSIVVVVPTGSHRVPAPSPMETQNQDVARSPAEVPND 187
P S + + AERLR P P + + P + A P + + Q A E P +
Sbjct: 210 PPSADDNIKTPAERLRGPLPPSADDNLKTPPLATQEAEAEKPRKPKRQRAAE--MEPPPE 267
Query: 188 PGKMFVGGLSWQTSP-GKSSKDISEEQRKAARSLCGHVTEP 307
P + VG + P + + D+ + R G V EP
Sbjct: 268 PKRRRVGDVEPSRKPKRRRAADVEPSSPEPKRRRVGDV-EP 307
>BC061522-1|AAH61522.1| 420|Homo sapiens DKFZp547E087 protein
protein.
Length = 420
Score = 29.5 bits (63), Expect = 6.6
Identities = 26/101 (25%), Positives = 40/101 (39%), Gaps = 1/101 (0%)
Frame = +2
Query: 8 PMSLVPVVGSAAERLREPSPTAYRSIVVVVPTGSHRVPAPSPMETQNQDVARSPAEVPND 187
P S + + AERLR P P + + P + A P + + Q A E P +
Sbjct: 269 PPSADDNIKTPAERLRGPLPPSADDNLKTPPLATQEAEAEKPRKPKRQRAAE--MEPPPE 326
Query: 188 PGKMFVGGLSWQTSP-GKSSKDISEEQRKAARSLCGHVTEP 307
P + VG + P + + D+ + R G V EP
Sbjct: 327 PKRRRVGDVEPSRKPKRRRAADVEPSSPEPKRRRVGDV-EP 366
>BC036263-1|AAH36263.1| 678|Homo sapiens LOC23117 protein protein.
Length = 678
Score = 29.5 bits (63), Expect = 6.6
Identities = 26/101 (25%), Positives = 40/101 (39%), Gaps = 1/101 (0%)
Frame = +2
Query: 8 PMSLVPVVGSAAERLREPSPTAYRSIVVVVPTGSHRVPAPSPMETQNQDVARSPAEVPND 187
P S + + AERLR P P + + P + A P + + Q A E P +
Sbjct: 527 PPSADDNIKTPAERLRGPLPPSADDNLKTPPLATQEAEAEKPRKPKRQRAAE--MEPPPE 584
Query: 188 PGKMFVGGLSWQTSP-GKSSKDISEEQRKAARSLCGHVTEP 307
P + VG + P + + D+ + R G V EP
Sbjct: 585 PKRRRVGDVEPSRKPKRRRAADVEPSSPEPKRRRVGDV-EP 624
>BC019088-1|AAH19088.1| 657|Homo sapiens ER degradation enhancer,
mannosidase alpha-like 1 protein.
Length = 657
Score = 29.5 bits (63), Expect = 6.6
Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
Frame = +2
Query: 44 ERLREPS-PTAYRSIVVVVPTGSHRVPAPSPMETQNQDVARSPAEVPNDPGKMFVGGLSW 220
+RLR P P + S V P G V PS ++ A+SP + P PG G +W
Sbjct: 44 QRLRSPDGPASPTSGPVGRPGG---VSGPSWLQPPGTGAAQSPRKAPRRPGPGMCGPANW 100
Query: 221 QTSPGKSSKDISEEQRK 271
G + E +++
Sbjct: 101 GYVLGGRGRGPDEYEKR 117
>BC016681-1|AAH16681.1| 473|Homo sapiens BRSK1 protein protein.
Length = 473
Score = 29.5 bits (63), Expect = 6.6
Identities = 22/72 (30%), Positives = 30/72 (41%), Gaps = 4/72 (5%)
Frame = +2
Query: 23 PVVGSAAERLREPSPTAYRSIVVVVPTGSHR----VPAPSPMETQNQDVARSPAEVPNDP 190
P G A E +P P + RS + P GS R P SP+ T +P P
Sbjct: 178 PRGGGAGE---QPPPPSARSTPLPGPPGSPRSSGGTPLHSPLHTPRASPTGTPGTTPPPS 234
Query: 191 GKMFVGGLSWQT 226
VGG +W++
Sbjct: 235 PGGGVGGAAWRS 246
>AY505124-1|AAS86442.1| 778|Homo sapiens protein kinase SAD-B
protein.
Length = 778
Score = 29.5 bits (63), Expect = 6.6
Identities = 22/72 (30%), Positives = 30/72 (41%), Gaps = 4/72 (5%)
Frame = +2
Query: 23 PVVGSAAERLREPSPTAYRSIVVVVPTGSHR----VPAPSPMETQNQDVARSPAEVPNDP 190
P G A E +P P + RS + P GS R P SP+ T +P P
Sbjct: 483 PRGGGAGE---QPPPPSARSTPLPGPPGSPRSSGGTPLHSPLHTPRASPTGTPGTTPPPS 539
Query: 191 GKMFVGGLSWQT 226
VGG +W++
Sbjct: 540 PGGGVGGAAWRS 551
>AY476736-1|AAS58324.1| 244|Homo sapiens heparan sulfate
3-O-sulfotransferase-4 protein.
Length = 244
Score = 29.5 bits (63), Expect = 6.6
Identities = 19/62 (30%), Positives = 28/62 (45%)
Frame = +2
Query: 8 PMSLVPVVGSAAERLREPSPTAYRSIVVVVPTGSHRVPAPSPMETQNQDVARSPAEVPND 187
P++L G+AAE P P + V + S + PAP P++ + P E P
Sbjct: 62 PLALQESPGAAAEPPPSPPPPSLLPTPVRLGAPS-QPPAPPPLDNASHGEPPEPPEQPAA 120
Query: 188 PG 193
PG
Sbjct: 121 PG 122
>AY458602-1|AAS10354.1| 778|Homo sapiens SAD1 kinase protein.
Length = 778
Score = 29.5 bits (63), Expect = 6.6
Identities = 22/72 (30%), Positives = 30/72 (41%), Gaps = 4/72 (5%)
Frame = +2
Query: 23 PVVGSAAERLREPSPTAYRSIVVVVPTGSHR----VPAPSPMETQNQDVARSPAEVPNDP 190
P G A E +P P + RS + P GS R P SP+ T +P P
Sbjct: 483 PRGGGAGE---QPPPPSARSTPLPGPPGSPRSSGGTPLHSPLHTPRASPTGTPGTTPPPS 539
Query: 191 GKMFVGGLSWQT 226
VGG +W++
Sbjct: 540 PGGGVGGAAWRS 551
>AL049853-3|CAI22452.1| 219|Homo sapiens novel transcript protein.
Length = 219
Score = 29.5 bits (63), Expect = 6.6
Identities = 16/53 (30%), Positives = 22/53 (41%)
Frame = -1
Query: 240 DLPGLVCQLSPPTNIFPGSLGTSAGLRATSWFWVSMGLGAGTRCEPVGTTTTI 82
DL V PP + P + GT + LR W W+ G P G+T +
Sbjct: 24 DLTAQVFHPWPPPQVMPEAQGTVSTLRPCPWLWIG-GPHQRPGLSPQGSTQVL 75
>AK128772-1|BAC87606.1| 834|Homo sapiens protein ( Homo sapiens
cDNA FLJ45371 fis, clone BRHIP3017855, highly similar
to Homo sapiens nuclear pore complex interacting protein
(NPIP). ).
Length = 834
Score = 29.5 bits (63), Expect = 6.6
Identities = 26/101 (25%), Positives = 40/101 (39%), Gaps = 1/101 (0%)
Frame = +2
Query: 8 PMSLVPVVGSAAERLREPSPTAYRSIVVVVPTGSHRVPAPSPMETQNQDVARSPAEVPND 187
P S + + AERLR P P + + P + A P + + Q A E P +
Sbjct: 683 PPSADDNIKTPAERLRGPLPPSADDNLKTPPLATQEAEAEKPRKPKRQRAAE--MEPPPE 740
Query: 188 PGKMFVGGLSWQTSP-GKSSKDISEEQRKAARSLCGHVTEP 307
P + VG + P + + D+ + R G V EP
Sbjct: 741 PKRRRVGDVEPSRKPKRRRAADVEPSSPEPKRRRVGDV-EP 780
>AF479827-1|AAL87698.1| 778|Homo sapiens protein kinase-like
protein protein.
Length = 778
Score = 29.5 bits (63), Expect = 6.6
Identities = 22/72 (30%), Positives = 30/72 (41%), Gaps = 4/72 (5%)
Frame = +2
Query: 23 PVVGSAAERLREPSPTAYRSIVVVVPTGSHR----VPAPSPMETQNQDVARSPAEVPNDP 190
P G A E +P P + RS + P GS R P SP+ T +P P
Sbjct: 483 PRGGGAGE---QPPPPSARSTPLPGPPGSPRSSGGTPLHSPLHTPRASPTGTPGTTPPPS 539
Query: 191 GKMFVGGLSWQT 226
VGG +W++
Sbjct: 540 PGGGVGGAAWRS 551
>AF479826-1|AAL87697.1| 794|Homo sapiens putative serine/threonine
protein kinase protein.
Length = 794
Score = 29.5 bits (63), Expect = 6.6
Identities = 22/72 (30%), Positives = 30/72 (41%), Gaps = 4/72 (5%)
Frame = +2
Query: 23 PVVGSAAERLREPSPTAYRSIVVVVPTGSHR----VPAPSPMETQNQDVARSPAEVPNDP 190
P G A E +P P + RS + P GS R P SP+ T +P P
Sbjct: 499 PRGGGAGE---QPPPPSARSTPLPGPPGSPRSSGGTPLHSPLHTPRASPTGTPGTTPPPS 555
Query: 191 GKMFVGGLSWQT 226
VGG +W++
Sbjct: 556 PGGGVGGAAWRS 567
>AF105378-1|AAD30210.2| 456|Homo sapiens heparan sulfate
3-O-sulfotransferase-4 protein.
Length = 456
Score = 29.5 bits (63), Expect = 6.6
Identities = 19/62 (30%), Positives = 28/62 (45%)
Frame = +2
Query: 8 PMSLVPVVGSAAERLREPSPTAYRSIVVVVPTGSHRVPAPSPMETQNQDVARSPAEVPND 187
P++L G+AAE P P + V + S + PAP P++ + P E P
Sbjct: 62 PLALQESPGAAAEPPPSPPPPSLLPTPVRLGAPS-QPPAPPPLDNASHGEPPEPPEQPAA 120
Query: 188 PG 193
PG
Sbjct: 121 PG 122
>AB209632-1|BAD92869.1| 854|Homo sapiens PI-3-kinase-related kinase
SMG-1 isoform 1homolog protein.
Length = 854
Score = 29.5 bits (63), Expect = 6.6
Identities = 26/101 (25%), Positives = 40/101 (39%), Gaps = 1/101 (0%)
Frame = +2
Query: 8 PMSLVPVVGSAAERLREPSPTAYRSIVVVVPTGSHRVPAPSPMETQNQDVARSPAEVPND 187
P S + + AERLR P P + + P + A P + + Q A E P +
Sbjct: 703 PPSADDNIKTPAERLRGPLPPSADDNLKTPPLATQEAEAEKPRKPKRQRAAE--MEPPPE 760
Query: 188 PGKMFVGGLSWQTSP-GKSSKDISEEQRKAARSLCGHVTEP 307
P + VG + P + + D+ + R G V EP
Sbjct: 761 PKRRRVGDVEPSRKPKRRRAADVEPSSPEPKRRRVGDV-EP 800
>AB058714-1|BAB47440.1| 715|Homo sapiens KIAA1811 protein protein.
Length = 715
Score = 29.5 bits (63), Expect = 6.6
Identities = 22/72 (30%), Positives = 30/72 (41%), Gaps = 4/72 (5%)
Frame = +2
Query: 23 PVVGSAAERLREPSPTAYRSIVVVVPTGSHR----VPAPSPMETQNQDVARSPAEVPNDP 190
P G A E +P P + RS + P GS R P SP+ T +P P
Sbjct: 420 PRGGGAGE---QPPPPSARSTPLPGPPGSPRSSGGTPLHSPLHTPRASPTGTPGTTPPPS 476
Query: 191 GKMFVGGLSWQT 226
VGG +W++
Sbjct: 477 PGGGVGGAAWRS 488
>AL049853-2|CAO72108.1| 74|Homo sapiens novel transcript protein.
Length = 74
Score = 29.1 bits (62), Expect = 8.8
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = -1
Query: 240 DLPGLVCQLSPPTNIFPGSLGTSAGLRATSWFWV 139
DL V PP + P + GT + LR W W+
Sbjct: 24 DLTAQVFHPWPPPQVMPEAQGTVSTLRPCPWLWI 57
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,718,597
Number of Sequences: 237096
Number of extensions: 1353022
Number of successful extensions: 9620
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 9225
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9596
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4423060356
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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