Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_F_M08
(492 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 36 0.012
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 36 0.012
U64833-8|AAB04820.1| 432|Caenorhabditis elegans Hypothetical pr... 34 0.049
Z68753-3|CAA92988.3| 984|Caenorhabditis elegans Hypothetical pr... 31 0.34
Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical pr... 30 0.79
Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical pr... 30 0.79
U39996-6|AAA81092.1| 595|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z66563-2|CAA91469.3| 2557|Caenorhabditis elegans Hypothetical pr... 28 3.2
DQ178246-1|ABA18185.1| 482|Caenorhabditis elegans TPX2-related ... 28 3.2
DQ178245-1|ABA18184.1| 507|Caenorhabditis elegans TPX2-related ... 28 3.2
AC025716-4|AAL32238.1| 482|Caenorhabditis elegans Tpx2 (targeti... 28 3.2
AC025716-2|AAK39617.1| 507|Caenorhabditis elegans Tpx2 (targeti... 28 3.2
Z47808-12|CAB61003.1| 902|Caenorhabditis elegans Hypothetical p... 28 4.2
Z47808-11|CAD36487.1| 928|Caenorhabditis elegans Hypothetical p... 28 4.2
Z35595-13|CAA84639.2| 902|Caenorhabditis elegans Hypothetical p... 28 4.2
Z35595-12|CAD36478.1| 928|Caenorhabditis elegans Hypothetical p... 28 4.2
Z35595-11|CAJ34992.1| 769|Caenorhabditis elegans Hypothetical p... 28 4.2
AJ132947-1|CAC29085.1| 902|Caenorhabditis elegans receptor tyro... 28 4.2
AJ132946-1|CAC29084.1| 928|Caenorhabditis elegans receptor tyro... 28 4.2
Z81521-4|CAB04229.1| 367|Caenorhabditis elegans Hypothetical pr... 27 5.6
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 27 5.6
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 27 5.6
U39742-2|AAM51521.1| 321|Caenorhabditis elegans Hypothetical pr... 27 5.6
U39742-1|AAK39198.1| 322|Caenorhabditis elegans Hypothetical pr... 27 5.6
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 27 5.6
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 27 5.6
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 27 5.6
EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA... 27 5.6
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 27 5.6
U28971-1|AAA68376.2| 551|Caenorhabditis elegans Egg sterile (un... 27 9.8
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 36.3 bits (80), Expect = 0.012
Identities = 13/15 (86%), Positives = 15/15 (100%)
Frame = +2
Query: 185 DPGKMFVGGLSWQTS 229
DPGKMF+GGLSWQT+
Sbjct: 43 DPGKMFIGGLSWQTT 57
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 36.3 bits (80), Expect = 0.012
Identities = 13/15 (86%), Positives = 15/15 (100%)
Frame = +2
Query: 185 DPGKMFVGGLSWQTS 229
DPGKMF+GGLSWQT+
Sbjct: 43 DPGKMFIGGLSWQTT 57
>U64833-8|AAB04820.1| 432|Caenorhabditis elegans Hypothetical
protein B0507.3 protein.
Length = 432
Score = 34.3 bits (75), Expect = 0.049
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Frame = +2
Query: 59 PSPTAYRSIVVVVPTGSHRVPAPSPMETQNQDVARSPAEVPN-DPGKMFVGGLSWQTSPG 235
P PT + V P P P +++Q Q + +SPA P+ D V L+
Sbjct: 147 PPPTLVTGPLKVAPASL--APVPMEIQSQEQPIKKSPAPTPSLDASNKPVAALASTPQQK 204
Query: 236 KSSKDISEEQR-KAARSL 286
+S+K +EQ+ KAA S+
Sbjct: 205 ESTKKTEKEQKEKAAPSV 222
>Z68753-3|CAA92988.3| 984|Caenorhabditis elegans Hypothetical
protein ZC518.2 protein.
Length = 984
Score = 31.5 bits (68), Expect = 0.34
Identities = 17/49 (34%), Positives = 24/49 (48%)
Frame = +2
Query: 23 PVVGSAAERLREPSPTAYRSIVVVVPTGSHRVPAPSPMETQNQDVARSP 169
P VGSAA ++ P P+A S + PAP+P + Q +A P
Sbjct: 139 PSVGSAAPSIQPPIPSALASARPAPFPAAQPPPAPTPTPSYQQQMAPRP 187
>Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical
protein C46C2.1b protein.
Length = 1677
Score = 30.3 bits (65), Expect = 0.79
Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = +2
Query: 8 PMSLVPVVGSAAERLREPSPT-AYRSIVVVVPTGSHRVPAPSPMETQNQDVARSPAEVPN 184
P++++ + + + +P P + S V VPT VP PS + QN +P N
Sbjct: 791 PVTMIANIPAMSPTSAQPQPVLSPTSAAVPVPTTMIHVPKPSEIPVQNVATTAAPVAANN 850
Query: 185 DP 190
P
Sbjct: 851 VP 852
Score = 27.1 bits (57), Expect = 7.4
Identities = 14/55 (25%), Positives = 23/55 (41%)
Frame = +2
Query: 35 SAAERLREPSPTAYRSIVVVVPTGSHRVPAPSPMETQNQDVARSPAEVPNDPGKM 199
+AA P+PT + + + P P P+ TQ + A+ P+ P M
Sbjct: 740 AAAAAAANPNPTPIPPTPATPHSSAQQQPIPPPLSTQTSAEIQQSAQQPSVPVTM 794
>Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical
protein C46C2.1a protein.
Length = 1838
Score = 30.3 bits (65), Expect = 0.79
Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = +2
Query: 8 PMSLVPVVGSAAERLREPSPT-AYRSIVVVVPTGSHRVPAPSPMETQNQDVARSPAEVPN 184
P++++ + + + +P P + S V VPT VP PS + QN +P N
Sbjct: 791 PVTMIANIPAMSPTSAQPQPVLSPTSAAVPVPTTMIHVPKPSEIPVQNVATTAAPVAANN 850
Query: 185 DP 190
P
Sbjct: 851 VP 852
Score = 27.1 bits (57), Expect = 7.4
Identities = 14/55 (25%), Positives = 23/55 (41%)
Frame = +2
Query: 35 SAAERLREPSPTAYRSIVVVVPTGSHRVPAPSPMETQNQDVARSPAEVPNDPGKM 199
+AA P+PT + + + P P P+ TQ + A+ P+ P M
Sbjct: 740 AAAAAAANPNPTPIPPTPATPHSSAQQQPIPPPLSTQTSAEIQQSAQQPSVPVTM 794
>U39996-6|AAA81092.1| 595|Caenorhabditis elegans Hypothetical
protein C56E6.5 protein.
Length = 595
Score = 28.7 bits (61), Expect = 2.4
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = -2
Query: 404 FIGSVRFSEKSRRSHFHFVSVGKFCPRNINPTA 306
F G V +S + R HF G CP N NP A
Sbjct: 230 FYGEVAYSGQMRLLPNHFKKAGFECPPNENPAA 262
>Z66563-2|CAA91469.3| 2557|Caenorhabditis elegans Hypothetical protein
F46C3.3 protein.
Length = 2557
Score = 28.3 bits (60), Expect = 3.2
Identities = 16/55 (29%), Positives = 24/55 (43%)
Frame = +2
Query: 86 VVVVPTGSHRVPAPSPMETQNQDVARSPAEVPNDPGKMFVGGLSWQTSPGKSSKD 250
VV P S+R P+P+P + + R P E +P S SP + + D
Sbjct: 1602 VVPPPPSSYRAPSPAPTSGDRRGLNRLPQESYTEPAVKNTKNNSEYLSPHRFNLD 1656
>DQ178246-1|ABA18185.1| 482|Caenorhabditis elegans TPX2-related
alternative variant b protein.
Length = 482
Score = 28.3 bits (60), Expect = 3.2
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +2
Query: 59 PSPTAYRSIVVVVPTGSHRVPAPSPMETQNQDVARSPA 172
P TA RS ++ + VPAP+P + Q A PA
Sbjct: 329 PIATANRSSILRMNVVKPTVPAPAPADAQQNKAASRPA 366
>DQ178245-1|ABA18184.1| 507|Caenorhabditis elegans TPX2-related
alternative variant a protein.
Length = 507
Score = 28.3 bits (60), Expect = 3.2
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +2
Query: 59 PSPTAYRSIVVVVPTGSHRVPAPSPMETQNQDVARSPA 172
P TA RS ++ + VPAP+P + Q A PA
Sbjct: 329 PIATANRSSILRMNVVKPTVPAPAPADAQQNKAASRPA 366
>AC025716-4|AAL32238.1| 482|Caenorhabditis elegans Tpx2 (targeting
protein for xenopusklp2)-like protein 1, isoform b
protein.
Length = 482
Score = 28.3 bits (60), Expect = 3.2
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +2
Query: 59 PSPTAYRSIVVVVPTGSHRVPAPSPMETQNQDVARSPA 172
P TA RS ++ + VPAP+P + Q A PA
Sbjct: 329 PIATANRSSILRMNVVKPTVPAPAPADAQQNKAASRPA 366
>AC025716-2|AAK39617.1| 507|Caenorhabditis elegans Tpx2 (targeting
protein for xenopusklp2)-like protein 1, isoform a
protein.
Length = 507
Score = 28.3 bits (60), Expect = 3.2
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +2
Query: 59 PSPTAYRSIVVVVPTGSHRVPAPSPMETQNQDVARSPA 172
P TA RS ++ + VPAP+P + Q A PA
Sbjct: 329 PIATANRSSILRMNVVKPTVPAPAPADAQQNKAASRPA 366
>Z47808-12|CAB61003.1| 902|Caenorhabditis elegans Hypothetical
protein C01G6.8b protein.
Length = 902
Score = 27.9 bits (59), Expect = 4.2
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +2
Query: 92 VVPTGSHRVPAPSPMETQNQDVARSPAEVPND 187
++P+ H P P PM+ Q R P++ P D
Sbjct: 519 LLPSAQHLGPPPYPMDQHLQQARRFPSQEPID 550
>Z47808-11|CAD36487.1| 928|Caenorhabditis elegans Hypothetical
protein C01G6.8a protein.
Length = 928
Score = 27.9 bits (59), Expect = 4.2
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +2
Query: 92 VVPTGSHRVPAPSPMETQNQDVARSPAEVPND 187
++P+ H P P PM+ Q R P++ P D
Sbjct: 545 LLPSAQHLGPPPYPMDQHLQQARRFPSQEPID 576
>Z35595-13|CAA84639.2| 902|Caenorhabditis elegans Hypothetical
protein C01G6.8b protein.
Length = 902
Score = 27.9 bits (59), Expect = 4.2
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +2
Query: 92 VVPTGSHRVPAPSPMETQNQDVARSPAEVPND 187
++P+ H P P PM+ Q R P++ P D
Sbjct: 519 LLPSAQHLGPPPYPMDQHLQQARRFPSQEPID 550
>Z35595-12|CAD36478.1| 928|Caenorhabditis elegans Hypothetical
protein C01G6.8a protein.
Length = 928
Score = 27.9 bits (59), Expect = 4.2
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +2
Query: 92 VVPTGSHRVPAPSPMETQNQDVARSPAEVPND 187
++P+ H P P PM+ Q R P++ P D
Sbjct: 545 LLPSAQHLGPPPYPMDQHLQQARRFPSQEPID 576
>Z35595-11|CAJ34992.1| 769|Caenorhabditis elegans Hypothetical
protein C01G6.8c protein.
Length = 769
Score = 27.9 bits (59), Expect = 4.2
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +2
Query: 92 VVPTGSHRVPAPSPMETQNQDVARSPAEVPND 187
++P+ H P P PM+ Q R P++ P D
Sbjct: 386 LLPSAQHLGPPPYPMDQHLQQARRFPSQEPID 417
>AJ132947-1|CAC29085.1| 902|Caenorhabditis elegans receptor
tyrosine kinase protein.
Length = 902
Score = 27.9 bits (59), Expect = 4.2
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +2
Query: 92 VVPTGSHRVPAPSPMETQNQDVARSPAEVPND 187
++P+ H P P PM+ Q R P++ P D
Sbjct: 519 LLPSAQHLGPPPYPMDQHLQQARRFPSQEPID 550
>AJ132946-1|CAC29084.1| 928|Caenorhabditis elegans receptor
tyrosine kinase protein.
Length = 928
Score = 27.9 bits (59), Expect = 4.2
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +2
Query: 92 VVPTGSHRVPAPSPMETQNQDVARSPAEVPND 187
++P+ H P P PM+ Q R P++ P D
Sbjct: 545 LLPSAQHLGPPPYPMDQHLQQARRFPSQEPID 576
>Z81521-4|CAB04229.1| 367|Caenorhabditis elegans Hypothetical
protein F32A11.6 protein.
Length = 367
Score = 27.5 bits (58), Expect = 5.6
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +2
Query: 203 VGGLSWQTSPGKSSKDISEEQRKAARSLCGHVTEP 307
+GGL Q+SP KSS D S + A+ C T P
Sbjct: 247 MGGLEMQSSPMKSSSDSSHMRSPMAQMNC-ETTRP 280
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 27.5 bits (58), Expect = 5.6
Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Frame = +2
Query: 89 VVVPTGSHRV---PAPSPMETQNQDVARSPAEVPNDPGKMFVGGLSWQ 223
VVVP V +P + DV+ SP+E D KMFVG + Q
Sbjct: 18 VVVPIAESTVINAKDTTPSTAADNDVSPSPSEPDTDAIKMFVGQIPRQ 65
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 27.5 bits (58), Expect = 5.6
Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Frame = +2
Query: 89 VVVPTGSHRV---PAPSPMETQNQDVARSPAEVPNDPGKMFVGGLSWQ 223
VVVP V +P + DV+ SP+E D KMFVG + Q
Sbjct: 18 VVVPIAESTVINAKDTTPSTAADNDVSPSPSEPDTDAIKMFVGQIPRQ 65
>U39742-2|AAM51521.1| 321|Caenorhabditis elegans Hypothetical
protein C25F6.7b protein.
Length = 321
Score = 27.5 bits (58), Expect = 5.6
Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +2
Query: 20 VPVVGSAAERLREPSPTAYR--SIVVVVPTGSHRVPAPSPMETQNQDVAR 163
VP+ G +R +E +++ SI+ + P+ R P+PSP + +N AR
Sbjct: 58 VPMEGGNFDRPKEKRSSSFGPLSIIRLSPSPLARTPSPSPPDYENAVNAR 107
>U39742-1|AAK39198.1| 322|Caenorhabditis elegans Hypothetical
protein C25F6.7a protein.
Length = 322
Score = 27.5 bits (58), Expect = 5.6
Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +2
Query: 20 VPVVGSAAERLREPSPTAYR--SIVVVVPTGSHRVPAPSPMETQNQDVAR 163
VP+ G +R +E +++ SI+ + P+ R P+PSP + +N AR
Sbjct: 59 VPMEGGNFDRPKEKRSSSFGPLSIIRLSPSPLARTPSPSPPDYENAVNAR 108
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 27.5 bits (58), Expect = 5.6
Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Frame = +2
Query: 89 VVVPTGSHRV---PAPSPMETQNQDVARSPAEVPNDPGKMFVGGLSWQ 223
VVVP V +P + DV+ SP+E D KMFVG + Q
Sbjct: 18 VVVPIAESTVINAKDTTPSTAADNDVSPSPSEPDTDAIKMFVGQIPRQ 65
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 27.5 bits (58), Expect = 5.6
Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Frame = +2
Query: 89 VVVPTGSHRV---PAPSPMETQNQDVARSPAEVPNDPGKMFVGGLSWQ 223
VVVP V +P + DV+ SP+E D KMFVG + Q
Sbjct: 18 VVVPIAESTVINAKDTTPSTAADNDVSPSPSEPDTDAIKMFVGQIPRQ 65
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 27.5 bits (58), Expect = 5.6
Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Frame = +2
Query: 89 VVVPTGSHRV---PAPSPMETQNQDVARSPAEVPNDPGKMFVGGLSWQ 223
VVVP V +P + DV+ SP+E D KMFVG + Q
Sbjct: 18 VVVPIAESTVINAKDTTPSTAADNDVSPSPSEPDTDAIKMFVGQIPRQ 65
>EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA
binding protein variantB protein.
Length = 193
Score = 27.5 bits (58), Expect = 5.6
Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Frame = +2
Query: 89 VVVPTGSHRV---PAPSPMETQNQDVARSPAEVPNDPGKMFVGGLSWQ 223
VVVP V +P + DV+ SP+E D KMFVG + Q
Sbjct: 18 VVVPIAESTVINAKDTTPSTAADNDVSPSPSEPDTDAIKMFVGQIPRQ 65
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 27.5 bits (58), Expect = 5.6
Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Frame = +2
Query: 89 VVVPTGSHRV---PAPSPMETQNQDVARSPAEVPNDPGKMFVGGLSWQ 223
VVVP V +P + DV+ SP+E D KMFVG + Q
Sbjct: 18 VVVPIAESTVINAKDTTPSTAADNDVSPSPSEPDTDAIKMFVGQIPRQ 65
>U28971-1|AAA68376.2| 551|Caenorhabditis elegans Egg sterile
(unfertilizable) protein1 protein.
Length = 551
Score = 26.6 bits (56), Expect = 9.8
Identities = 15/52 (28%), Positives = 27/52 (51%)
Frame = -1
Query: 261 SSEMSFDDLPGLVCQLSPPTNIFPGSLGTSAGLRATSWFWVSMGLGAGTRCE 106
+ ++ FDDL G+ P T++FP ++ T +G V M + + RC+
Sbjct: 99 TDKIRFDDLNGI-----PMTSLFPQNVSTCSGFGFACTGAVHMVIPSSKRCD 145
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,248,674
Number of Sequences: 27780
Number of extensions: 189611
Number of successful extensions: 659
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 611
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 657
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 924715866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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