Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_F_L22
(814 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_17563| Best HMM Match : DEAD (HMM E-Value=0) 241 5e-64
SB_2247| Best HMM Match : DEAD (HMM E-Value=0) 241 5e-64
SB_52320| Best HMM Match : DEAD (HMM E-Value=0) 102 4e-22
SB_32980| Best HMM Match : DEAD (HMM E-Value=0) 97 2e-20
SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.) 96 3e-20
SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.) 93 2e-19
SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38) 93 3e-19
SB_28853| Best HMM Match : No HMM Matches (HMM E-Value=.) 93 3e-19
SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.) 88 7e-18
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.) 86 4e-17
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.) 85 6e-17
SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42) 78 7e-15
SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.) 78 1e-14
SB_9558| Best HMM Match : DEAD (HMM E-Value=0) 77 2e-14
SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40) 77 2e-14
SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.) 76 4e-14
SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057) 71 8e-13
SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.) 71 8e-13
SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36) 68 8e-12
SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 1e-10
SB_37351| Best HMM Match : DEAD (HMM E-Value=0) 60 2e-09
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 2e-09
SB_43842| Best HMM Match : RNB (HMM E-Value=0) 60 2e-09
SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27) 57 2e-08
SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31) 54 2e-07
SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19) 52 6e-07
SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41) 49 4e-06
SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069) 46 3e-05
SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17) 40 0.002
SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22) 38 0.010
SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07) 38 0.013
SB_3229| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.022
SB_21084| Best HMM Match : DEAD (HMM E-Value=2e-22) 35 0.068
SB_17696| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.36
SB_51441| Best HMM Match : DEAD (HMM E-Value=4.9e-19) 30 1.9
SB_53581| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.8
SB_3666| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.8
>SB_17563| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 241 bits (590), Expect = 5e-64
Identities = 112/164 (68%), Positives = 137/164 (83%), Gaps = 7/164 (4%)
Frame = +2
Query: 344 WKSKLKIPPKDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIAL 523
WK+ LK+PPKD R KTSDVT T+GNEFE++CLKRELLMGIFEKG++KPSPIQE SIP+AL
Sbjct: 23 WKANLKLPPKDNRFKTSDVTATKGNEFEDYCLKRELLMGIFEKGFDKPSPIQEESIPVAL 82
Query: 524 SGKDVLARAKNGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHT 703
+G+D+LARAKNGTGKT AY +P+LE+ D K+ IQAL++VPTRELALQTSQICIEL KH
Sbjct: 83 AGRDILARAKNGTGKTAAYLVPLLERTDTTKNCIQALVLVPTRELALQTSQICIELGKHM 142
Query: 704 DIRVMVTTGGTNLRXDIMRIYQN-------VQVIIAXPGRMIDL 814
+VMVTTGGT+L+ DI+R+Y V VI+A PGR++DL
Sbjct: 143 GAQVMVTTGGTSLKDDILRLYNKDIFVHVVVHVIVATPGRVLDL 186
>SB_2247| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 241 bits (590), Expect = 5e-64
Identities = 112/164 (68%), Positives = 137/164 (83%), Gaps = 7/164 (4%)
Frame = +2
Query: 344 WKSKLKIPPKDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIAL 523
WK+ LK+PPKD R KTSDVT T+GNEFE++CLKRELLMGIFEKG++KPSPIQE SIP+AL
Sbjct: 23 WKANLKLPPKDNRFKTSDVTATKGNEFEDYCLKRELLMGIFEKGFDKPSPIQEESIPVAL 82
Query: 524 SGKDVLARAKNGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHT 703
+G+D+LARAKNGTGKT AY +P+LE+ D K+ IQAL++VPTRELALQTSQICIEL KH
Sbjct: 83 AGRDILARAKNGTGKTAAYLVPLLERTDTTKNCIQALVLVPTRELALQTSQICIELGKHM 142
Query: 704 DIRVMVTTGGTNLRXDIMRIYQN-------VQVIIAXPGRMIDL 814
+VMVTTGGT+L+ DI+R+Y V VI+A PGR++DL
Sbjct: 143 GAQVMVTTGGTSLKDDILRLYNKDIFVHVVVHVIVATPGRVLDL 186
>SB_52320| Best HMM Match : DEAD (HMM E-Value=0)
Length = 340
Score = 102 bits (244), Expect = 4e-22
Identities = 50/150 (33%), Positives = 89/150 (59%), Gaps = 4/150 (2%)
Frame = +2
Query: 371 KDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARA 550
KD + ++ + +F +F + + L G+ + G+ P+ IQ+ IP+ALSG+DVL A
Sbjct: 35 KDLEDRCKEIGSSEVEKFSDFPISKRTLDGLMKAGFVTPTDIQKQGIPVALSGRDVLGAA 94
Query: 551 KNGTGKTGAYCIPVLEQVDPKK----DTIQALIVVPTRELALQTSQICIELAKHTDIRVM 718
K G+GKT A+ IP++E + +K D + AL++ PTRELA QT ++ +++ D+
Sbjct: 95 KTGSGKTLAFLIPIIETLWRQKWTSMDGLGALVISPTRELAYQTFEVLVKIGNKHDLSAG 154
Query: 719 VTTGGTNLRXDIMRIYQNVQVIIAXPGRMI 808
+ GG +L+ + RI +++ PGR++
Sbjct: 155 LIIGGKDLKNEQKRI-MKTNIVVCTPGRLL 183
>SB_32980| Best HMM Match : DEAD (HMM E-Value=0)
Length = 985
Score = 96.7 bits (230), Expect = 2e-20
Identities = 51/141 (36%), Positives = 80/141 (56%), Gaps = 1/141 (0%)
Frame = +2
Query: 386 KTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTG 565
+T+DV +F L LL G+ E G+EKPSPIQ +IP+ G D++A+AK+GTG
Sbjct: 3 RTTDVLIEEQIDFHSLLLSPTLLRGLNEAGFEKPSPIQLKAIPLGRCGLDLIAQAKSGTG 62
Query: 566 KTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTD-IRVMVTTGGTNL 742
KT + + LE V + + IQ +I+ PTRE+A+Q + + H D + V GG +L
Sbjct: 63 KTCVFSVIALENVITESNCIQIIILTPTREIAVQVKDVICAIGCHYDGLACKVFIGGISL 122
Query: 743 RXDIMRIYQNVQVIIAXPGRM 805
D + ++ + + PGR+
Sbjct: 123 EED-KKALKSCHIAVGTPGRV 142
>SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 370
Score = 95.9 bits (228), Expect = 3e-20
Identities = 44/115 (38%), Positives = 72/115 (62%)
Frame = +2
Query: 470 KGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVDPKKDTIQALIVVPT 649
+G+EKPS IQ+ +I L G+DV+A+A++GTGKT + I VL+ +D + QAL++ PT
Sbjct: 15 EGFEKPSAIQQRAIKPILKGRDVIAQAQSGTGKTATFSISVLQAIDTQLREPQALVLSPT 74
Query: 650 RELALQTSQICIELAKHTDIRVMVTTGGTNLRXDIMRIYQNVQVIIAXPGRMIDL 814
RELA Q ++ + L + ++ GGTN+ DI ++ ++ PGR+ D+
Sbjct: 75 RELANQIQKVVLALGDYMSVQCHACIGGTNIGEDIRKLDYGQHIVSGTPGRVFDM 129
>SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 93.1 bits (221), Expect = 2e-19
Identities = 54/159 (33%), Positives = 86/159 (54%), Gaps = 28/159 (17%)
Frame = +2
Query: 422 FEEFCLKRELLMGIFEKGWEKPSPIQEASIP----------------------IALSGKD 535
F++ LK LL GI+ G+EKPS IQ+ +I LS +D
Sbjct: 65 FDDMNLKEALLRGIYAYGFEKPSAIQQRAIRPCCQEFSPSHVCYNQLNLTKNHYVLSARD 124
Query: 536 VLARAKNGTGKTGAYCIPVLEQVDPKK------DTIQALIVVPTRELALQTSQICIELAK 697
V+A+A++GTGKT + I +L+++D D QAL++ PTRELA Q ++ + L
Sbjct: 125 VIAQAQSGTGKTATFAISILQEIDTNYKDKNGCDCCQALVLAPTRELAQQIQKVVLALGD 184
Query: 698 HTDIRVMVTTGGTNLRXDIMRIYQNVQVIIAXPGRMIDL 814
+ ++ GGTN+R D M++ + V V++ PGR+ D+
Sbjct: 185 YMHVKCHACIGGTNVREDRMKLEEGVHVVVGTPGRVFDM 223
>SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38)
Length = 475
Score = 92.7 bits (220), Expect = 3e-19
Identities = 46/133 (34%), Positives = 77/133 (57%), Gaps = 2/133 (1%)
Frame = +2
Query: 422 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 601
F +F LK ELL I + G+E PS +Q IP A+ G D++ +AK+G GKT + + L+Q
Sbjct: 49 FRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDIICQAKSGMGKTAVFVLATLQQ 108
Query: 602 VDPKKDTIQALIVVPTRELALQTSQICIELAKH-TDIRVMVTTGGTNLRXDIMRIYQNV- 775
++P + L++ TRELA Q + K+ ++I++ V GG N++ D + N
Sbjct: 109 LEPVDGQVSVLVMCHTRELAFQIHKEYERFCKYMSNIKIAVFFGGINIKKDQQTLKTNCP 168
Query: 776 QVIIAXPGRMIDL 814
+++ PGR++ L
Sbjct: 169 HIVVGTPGRILAL 181
>SB_28853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 208
Score = 92.7 bits (220), Expect = 3e-19
Identities = 46/133 (34%), Positives = 77/133 (57%), Gaps = 2/133 (1%)
Frame = +2
Query: 422 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 601
F +F LK ELL I + G+E PS +Q IP A+ G D++ +AK+G GKT + + L+Q
Sbjct: 49 FRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDIICQAKSGMGKTAVFVLATLQQ 108
Query: 602 VDPKKDTIQALIVVPTRELALQTSQICIELAKH-TDIRVMVTTGGTNLRXDIMRIYQNV- 775
++P + L++ TRELA Q + K+ ++I++ V GG N++ D + N
Sbjct: 109 LEPVDGQVSVLVMCHTRELAFQIHKEYERFCKYMSNIKIAVFFGGINIKKDQQTLKTNCP 168
Query: 776 QVIIAXPGRMIDL 814
+++ PGR++ L
Sbjct: 169 HIVVGTPGRILAL 181
>SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 88.2 bits (209), Expect = 7e-18
Identities = 46/136 (33%), Positives = 77/136 (56%), Gaps = 6/136 (4%)
Frame = +2
Query: 422 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 601
F E +L+ I G+ +P+P+Q+A++PI ++G+D++A A+ G+GKT AY +PVL
Sbjct: 481 FNELPFGEQLMANISRAGYRRPTPVQKAALPIVMAGRDLMACAQTGSGKTAAYMLPVLTS 540
Query: 602 V------DPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRXDIMRI 763
+ P + + AL V PTRELA Q + + HT I+V V GG ++ ++
Sbjct: 541 LIKQGLNAPPRSPL-ALCVAPTRELAKQIYIEARKFSDHTPIKVCVCYGGVSVPYQASQL 599
Query: 764 YQNVQVIIAXPGRMID 811
+ ++ PGR+ D
Sbjct: 600 ERGCHFLVGTPGRLQD 615
>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1448
Score = 85.8 bits (203), Expect = 4e-17
Identities = 47/130 (36%), Positives = 74/130 (56%), Gaps = 5/130 (3%)
Frame = +2
Query: 437 LKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE-----Q 601
+ + L GI + G+ + IQ SI L G+D+L AK G+GKT A+ +PV+E Q
Sbjct: 579 VSEKTLQGIKDMGFTTMTEIQHKSIAPLLKGRDLLGAAKTGSGKTLAFLVPVVELLYKLQ 638
Query: 602 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRXDIMRIYQNVQV 781
+ T +I+ PTREL+LQT + +L KH + + GG N + + R+ + V +
Sbjct: 639 FKTRNGT-GVIIISPTRELSLQTYGVARDLLKHHNFTYGIIMGGVNRKAEAERLQKGVNL 697
Query: 782 IIAXPGRMID 811
+IA PGR++D
Sbjct: 698 LIATPGRLLD 707
>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 85.0 bits (201), Expect = 6e-17
Identities = 46/141 (32%), Positives = 78/141 (55%), Gaps = 9/141 (6%)
Frame = +2
Query: 416 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 595
N FEE L L + + ++KP+P+Q+ SIPI ++G+DV+A A+ G+GKT A+ +PV+
Sbjct: 711 NSFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGRDVMACAQTGSGKTAAFLLPVM 770
Query: 596 EQV---------DPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRX 748
+ + T QA+ + PTRELA Q + A T +R +V GG ++
Sbjct: 771 TSMMNAGLTSSSFSETQTPQAMCIAPTRELANQIYLEARKFAHGTMLRPVVCYGGVSVSH 830
Query: 749 DIMRIYQNVQVIIAXPGRMID 811
+ ++ +++ PGR+ D
Sbjct: 831 QLRQLQSGCNLLVGTPGRLTD 851
>SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42)
Length = 238
Score = 78.2 bits (184), Expect = 7e-15
Identities = 36/94 (38%), Positives = 56/94 (59%)
Frame = +2
Query: 530 KDVLARAKNGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDI 709
KDV+ A+ G+GKTGA+ +P+L+ + + ALI+ PTRELA Q S+ C L +
Sbjct: 2 KDVIGLAETGSGKTGAFALPILQALLDNPQRLFALILTPTRELAFQISEQCEALGSGIGV 61
Query: 710 RVMVTTGGTNLRXDIMRIYQNVQVIIAXPGRMID 811
+ V GG ++ + + + +IIA PGR+ID
Sbjct: 62 KCAVIVGGIDMMSQALMLAKKPHIIIATPGRLID 95
>SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 77.8 bits (183), Expect = 1e-14
Identities = 47/152 (30%), Positives = 81/152 (53%), Gaps = 20/152 (13%)
Frame = +2
Query: 419 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALS-GKDVLARAKNGTGKTGAYCIPVL 595
E+E + ++L + ++G+ KP+PIQ SIP AL +D++ A+ G+GKT A+ IP++
Sbjct: 131 EWEGLGVAPDILRALGDQGFSKPTPIQSLSIPPALLYHRDIIGAAETGSGKTLAFGIPII 190
Query: 596 EQVDPKKD-------------------TIQALIVVPTRELALQTSQICIELAKHTDIRVM 718
+ ++ K + ALI+ PTRELALQ ++ AK+T ++V
Sbjct: 191 QHIEAYKKRKAEQSPSDKESDLESQGYPLLALIMAPTRELALQVKDHLVKAAKYTSVKVA 250
Query: 719 VTTGGTNLRXDIMRIYQNVQVIIAXPGRMIDL 814
GG + Q ++++A PGR+ +L
Sbjct: 251 AIVGGMAAPKQQRLLKQRPEIVVATPGRLWEL 282
>SB_9558| Best HMM Match : DEAD (HMM E-Value=0)
Length = 436
Score = 77.0 bits (181), Expect = 2e-14
Identities = 40/125 (32%), Positives = 67/125 (53%)
Frame = +2
Query: 437 LKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVDPKK 616
L + L+ G +KP+ IQ +P L G+D + AK G+GKT A+ +P+L+++
Sbjct: 14 LNKWLVSQCVAMGIKKPTEIQLNCVPPILQGRDCIGCAKTGSGKTAAFALPILQKLCDDP 73
Query: 617 DTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRXDIMRIYQNVQVIIAXP 796
I A+++ PTRELA Q + L + ++ V GG ++ + + V+IA P
Sbjct: 74 YGIFAVVLTPTRELAFQIADQFKVLGRPIGLKEAVIVGGLDMMKQALSLANKPHVVIATP 133
Query: 797 GRMID 811
GR+ D
Sbjct: 134 GRLAD 138
>SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)
Length = 490
Score = 77.0 bits (181), Expect = 2e-14
Identities = 48/160 (30%), Positives = 82/160 (51%), Gaps = 5/160 (3%)
Frame = +2
Query: 347 KSKLKIPPKDRRIKTSDVTDT--RGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIA 520
+ KL + + + SD + FEE L L G+++ G+ KPS IQE ++P+
Sbjct: 78 RDKLVVTKHEVEVLRSDPSSPLYSAKSFEELPLSANLRRGVYDMGFNKPSKIQETALPML 137
Query: 521 LSGKDV--LARAKNGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELA 694
L+ V +A++++GTGKT A+ + +L +VD K Q + + PT ELA QT ++ +
Sbjct: 138 LADPPVNMIAQSQSGTGKTAAFVLTMLSRVDATKPYPQVICLSPTYELARQTGKVAEAMG 197
Query: 695 KH-TDIRVMVTTGGTNLRXDIMRIYQNVQVIIAXPGRMID 811
KH I++ G + + +II PG ++D
Sbjct: 198 KHCPHIKINYAVRGNQFPRG-QKCTDH--IIIGTPGTLLD 234
>SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 75.8 bits (178), Expect = 4e-14
Identities = 44/135 (32%), Positives = 69/135 (51%), Gaps = 5/135 (3%)
Frame = +2
Query: 422 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 601
F F +++ I + + +P+ IQ ++PIALSG+D++ AK G+GKT A+ P L
Sbjct: 519 FAHFGFDEQMMASIRKLEYTQPTQIQCQALPIALSGRDIIGIAKTGSGKTAAFLWPALVH 578
Query: 602 V--DPK---KDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRXDIMRIY 766
+ P+ D LI PTREL Q K +I V+ GG N +
Sbjct: 579 IMDQPELQVGDGPIVLICAPTRELCQQIYTEARRFGKAYNIHVVAVFGGGNKYEQSKALQ 638
Query: 767 QNVQVIIAXPGRMID 811
+ ++++A PGR+ID
Sbjct: 639 EGAEIVVATPGRLID 653
>SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057)
Length = 96
Score = 71.3 bits (167), Expect = 8e-13
Identities = 34/70 (48%), Positives = 49/70 (70%), Gaps = 3/70 (4%)
Frame = +2
Query: 467 EKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQV---DPKKDTIQALI 637
E G+ P+PIQ ++IP+AL GKDV A A GTGKT A+ +P+LE++ + I+ L+
Sbjct: 27 ELGFLHPTPIQASTIPVALMGKDVCACAATGTGKTAAFMLPILERLLYRPTQSPAIRVLV 86
Query: 638 VVPTRELALQ 667
+ PTRELA+Q
Sbjct: 87 ITPTRELAIQ 96
>SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1039
Score = 71.3 bits (167), Expect = 8e-13
Identities = 36/81 (44%), Positives = 53/81 (65%), Gaps = 2/81 (2%)
Frame = +2
Query: 506 SIPIALSGKDVLARAKNGTGKTGAYCIPVLE--QVDPKKDTIQALIVVPTRELALQTSQI 679
++P+ + GKDV+A A+ G+GKT A+ IP+ E Q K I+ALI+ PTRELALQT +
Sbjct: 311 TLPLVMDGKDVVAMARTGSGKTAAFLIPMFEKLQTHTAKVGIRALILSPTRELALQTQKF 370
Query: 680 CIELAKHTDIRVMVTTGGTNL 742
EL + T ++ V GG ++
Sbjct: 371 IKELGRFTGLKSSVILGGDSV 391
>SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)
Length = 428
Score = 68.1 bits (159), Expect = 8e-12
Identities = 55/188 (29%), Positives = 93/188 (49%), Gaps = 20/188 (10%)
Frame = +2
Query: 284 VGNSISQTKGEVDK-SIDDVGWKSKL--KIPPKDRRIKTSDVT-DTRGN-------EFEE 430
+ N + + K + K + DD W K ++ +D RI D T+G +++E
Sbjct: 46 IRNRLKKEKDKERKVAFDDRHWTKKNLEEMTERDWRIFREDFNISTKGGRIPFPIRKWKE 105
Query: 431 FCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPV------ 592
+ +L + + G++ P+PIQ +IPI L +D++ A+ G+GKT A+ IP+
Sbjct: 106 AQIPDSILEIVDKLGYKDPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFAIPLLVWIMG 165
Query: 593 LEQVDPKKDTIQ---ALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRXDIMRI 763
L +++ D Q ALI+ PTRELA Q + ++ + IR + GG + D M
Sbjct: 166 LPKIERDNDADQGPYALILAPTRELAQQIEEEILKFGRPLGIRTVSVIGGADRMID-MGF 224
Query: 764 YQNVQVII 787
VQ I+
Sbjct: 225 EPEVQKIL 232
>SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 592
Score = 64.5 bits (150), Expect = 1e-10
Identities = 48/173 (27%), Positives = 83/173 (47%), Gaps = 4/173 (2%)
Frame = +2
Query: 308 KGEVD--KSIDDVGWKSKLKIP-PKDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGW 478
+G++D + + V K+ + P KD ++ ++ E +EF L E I +G
Sbjct: 42 EGDIDAMEELQPVDHKTVVYQPFRKDFYVEVPELAKMTPEETDEFRLSLE---NIHVRGK 98
Query: 479 EKPSPIQE-ASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRE 655
P P++ A + L DVL KN K + + +D I A+++ PTRE
Sbjct: 99 NAPKPVKTWAQTGVQLKILDVLK--KNSYEKPTPIQAQAIPVIMSGRDMI-AIVMTPTRE 155
Query: 656 LALQTSQICIELAKHTDIRVMVTTGGTNLRXDIMRIYQNVQVIIAXPGRMIDL 814
LA+Q + C + K ++R + GGT + I + + ++I+ PGRMID+
Sbjct: 156 LAIQIHRECKKFCKPNNLRCVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDM 208
>SB_37351| Best HMM Match : DEAD (HMM E-Value=0)
Length = 688
Score = 60.5 bits (140), Expect = 2e-09
Identities = 37/140 (26%), Positives = 70/140 (50%), Gaps = 6/140 (4%)
Frame = +2
Query: 410 RGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIP 589
R +F +F + ++ + + ++G PIQ ++ G+DV+ +A+ GTGKT ++ +P
Sbjct: 71 REGDFSKFRISQKTIDNLEDRGITYLFPIQASTFNYIYDGEDVIGQARTGTGKTLSFALP 130
Query: 590 VLEQVDPKK------DTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRXD 751
++E++ K + L++ PTRELA Q L +++ V GG
Sbjct: 131 LVEKLQDGKLSQKRGRAPKVLVMAPTRELAKQVGNEFENL--KSNLEVYCIYGGMPYEPQ 188
Query: 752 IMRIYQNVQVIIAXPGRMID 811
I + V++ PGR++D
Sbjct: 189 ENAINSGLDVLVGTPGRILD 208
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 60.5 bits (140), Expect = 2e-09
Identities = 36/132 (27%), Positives = 67/132 (50%)
Frame = +2
Query: 419 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 598
+FE+ L LL + G++KP+P+Q+ +IPI +D++A A+ G+GKT A+ IP+L
Sbjct: 876 QFEDVDLGEILLHNVGLAGYKKPTPVQKYAIPIVKGKRDLMACAQTGSGKTAAFLIPILS 935
Query: 599 QVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRXDIMRIYQNVQ 778
++ + P +C R V GG ++ + + +N
Sbjct: 936 RI---------YMEGPPAPPDFSYRSLC---------RPCVVYGGADIGSQLRELDRNCH 977
Query: 779 VIIAXPGRMIDL 814
+++A PGR++D+
Sbjct: 978 LLVATPGRLVDM 989
>SB_43842| Best HMM Match : RNB (HMM E-Value=0)
Length = 1238
Score = 60.5 bits (140), Expect = 2e-09
Identities = 49/192 (25%), Positives = 86/192 (44%), Gaps = 27/192 (14%)
Frame = +2
Query: 320 DKSIDDVGWKSKLKIPPKDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQ 499
D+ +D++ WK+ + I +D F + L EL + +K ++ P+PIQ
Sbjct: 48 DEVVDEIRWKNGIHIEGED--------CPKPIESFHDLNLPPELSTYLAKKNFQVPTPIQ 99
Query: 500 EASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVDPKK-----DTIQALIVVPTRELAL 664
S+ +SG+D++ A+ G+GKT AY +P+ + K DT ALI+ PTREL
Sbjct: 100 MQSLSCVMSGRDIIGLAETGSGKTLAYSLPLCMLLRTKAPSNPGDTPVALILTPTRELMQ 159
Query: 665 QT---------------------SQICIELAKHTD-IRVMVTTGGTNLRXDIMRIYQNVQ 778
Q + + + T + + GG + + + +
Sbjct: 160 QVFMNVSEMLDVIRCPGNPGPSNQSVIYDTQQFTARYKAVAVCGGVPVSTQTIALREGAD 219
Query: 779 VIIAXPGRMIDL 814
V++A PGR++DL
Sbjct: 220 VVVATPGRLLDL 231
>SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27)
Length = 559
Score = 56.8 bits (131), Expect = 2e-08
Identities = 32/83 (38%), Positives = 50/83 (60%)
Frame = +2
Query: 419 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 598
EF F + +L+ + + G KP PIQE ++P S K +L +++ GTGK+ + +P ++
Sbjct: 161 EFSNFGVHPKLVEKLKKMGITKPVPIQEKALPSVFSHKSLLIKSETGTGKSLVFLLPSVQ 220
Query: 599 QVDPKKDTIQALIVVPTRELALQ 667
DP + +IVVPTRELA Q
Sbjct: 221 --DPGRG-YGTIIVVPTRELASQ 240
>SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31)
Length = 978
Score = 53.6 bits (123), Expect = 2e-07
Identities = 51/190 (26%), Positives = 88/190 (46%), Gaps = 9/190 (4%)
Frame = +2
Query: 266 ISSSNHVGNSISQTKGEVDKSIDDVGWKSKLKIPPKDRRIKTSDVTDTRGNEFEEFCLKR 445
++SSN ++S KGE + +I+ VG ++ P D + R F L+
Sbjct: 337 MASSNLPEATVS--KGEKEVTIEAVG-QNPAFTPDSDMAFRQ------RVYSFAGLGLRD 387
Query: 446 ELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQV--DPKKD 619
++L + +P+ IQ +IP + V+ A+ G+GKT AY P++ ++ D ++
Sbjct: 388 DVLKALDALNIHQPTVIQMVTIPKIIHRHHVICAAQTGSGKTLAYLAPLVHRLREDEERH 447
Query: 620 TI-------QALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRXDIMRIYQNVQ 778
I +A IVVP RELA Q + L H R + GG + + V
Sbjct: 448 GILARLKRPRACIVVPARELATQILKTAKSLCHHARFRSVGLIGGRKQKWMRDDLESPVD 507
Query: 779 VIIAXPGRMI 808
+++A PG ++
Sbjct: 508 LLVATPGTLL 517
>SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19)
Length = 185
Score = 52.0 bits (119), Expect = 6e-07
Identities = 23/52 (44%), Positives = 36/52 (69%)
Frame = +2
Query: 416 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKT 571
N FEE L L + + ++KP+P+Q+ SIPI ++G+DV+A A+ G+GKT
Sbjct: 134 NSFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGRDVMACAQTGSGKT 185
>SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)
Length = 690
Score = 49.2 bits (112), Expect = 4e-06
Identities = 22/61 (36%), Positives = 34/61 (55%)
Frame = +2
Query: 632 LIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRXDIMRIYQNVQVIIAXPGRMID 811
L++ PTRELA Q ++ + KH +R GG I + + V++ IA PGR+ID
Sbjct: 136 LVLCPTRELAQQVQEVAYSVGKHCKLRSTCIYGGAPKGPQIRELERGVEICIATPGRLID 195
Query: 812 L 814
+
Sbjct: 196 M 196
>SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069)
Length = 120
Score = 46.4 bits (105), Expect = 3e-05
Identities = 20/60 (33%), Positives = 34/60 (56%)
Frame = +2
Query: 626 QALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRXDIMRIYQNVQVIIAXPGRM 805
QAL++ PTRELA Q ++ + L + ++ GGTN+ DI ++ ++ PGR+
Sbjct: 5 QALVLSPTRELANQIQKVVLALGDYMSVQCHACIGGTNIGEDIRKLDYGQHIVSGTPGRV 64
>SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17)
Length = 500
Score = 40.3 bits (90), Expect = 0.002
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = +2
Query: 419 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGK 568
EF L + G+ P+PIQ +P+ LSG+DV+ A G+GK
Sbjct: 197 EFFHCSFNESLSKNLSNHGYHSPTPIQMQVLPVLLSGRDVMVCASTGSGK 246
Score = 28.7 bits (61), Expect = 5.9
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +2
Query: 674 QICIELAKHTDIRVMVTTGGTNLRXDIMRIYQNVQVIIAXPGRMIDL 814
Q+ L D+ V +TG L + VQVI+A PGRM+++
Sbjct: 225 QVLPVLLSGRDVMVCASTGSGKLLPSSPEM--GVQVIVATPGRMVEI 269
>SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22)
Length = 1058
Score = 37.9 bits (84), Expect = 0.010
Identities = 33/124 (26%), Positives = 54/124 (43%), Gaps = 6/124 (4%)
Frame = +2
Query: 461 IFEKGWEKPSPIQEASIPIALSG-KDVLARAKNGTGKTGAYCIPV----LEQVDPKKDTI 625
I+ KG + P P++ S I G D + G T I + L PKK
Sbjct: 147 IYVKGADVPDPVETFSQLIERYGFPDYIIHNVQERGYTTPTPIQMQATPLMAHGPKKSGF 206
Query: 626 QALIVVPTRELALQTSQICIELAKHTDIRV-MVTTGGTNLRXDIMRIYQNVQVIIAXPGR 802
+A++V PTRELA Q + LAK R+ ++T + + + +++ P R
Sbjct: 207 RAVVVSPTRELAQQIYREFCHLAKGCAFRIHVLTKANASTNTFGAKSSKRFDILVTTPNR 266
Query: 803 MIDL 814
++ L
Sbjct: 267 LVHL 270
>SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07)
Length = 456
Score = 37.5 bits (83), Expect = 0.013
Identities = 28/113 (24%), Positives = 51/113 (45%), Gaps = 9/113 (7%)
Frame = +2
Query: 485 PSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVD--------PKKDTIQALIV 640
P+ +Q+ P L G+DV A G+GK AY +P++ Q+ P + LI+
Sbjct: 210 PTSLQKHMWPSLLRGRDVAGVAIEGSGKRLAYLLPIIHQITESSVYQELPLANGPLVLIL 269
Query: 641 VPTRELALQTSQICIELAKH-TDIRVMVTTGGTNLRXDIMRIYQNVQVIIAXP 796
+ + +C +L ++ RV + GG I+ + +V++A P
Sbjct: 270 CTNWQNTARVYGVCEDLIRNRRRTRVQMIFGGGAEEDRIVPLINGCEVLVATP 322
>SB_3229| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 45
Score = 36.7 bits (81), Expect = 0.022
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +2
Query: 728 GGTNLRXDIMRIYQNVQVIIAXPGRMIDL 814
GGTN+R D M++ + V V++ PGR+ D+
Sbjct: 10 GGTNVREDRMKLEEGVHVVVGTPGRVFDM 38
>SB_21084| Best HMM Match : DEAD (HMM E-Value=2e-22)
Length = 202
Score = 35.1 bits (77), Expect = 0.068
Identities = 21/60 (35%), Positives = 33/60 (55%)
Frame = +2
Query: 557 GTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGT 736
G+GKT + +L + K + Q+ ++ PT LA Q ELAK DI++++ TG T
Sbjct: 87 GSGKT---IVALLCMLIAKDNDFQSCLMAPTEILATQHFNGISELAKDLDIKIVLLTGST 143
>SB_17696| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 119
Score = 32.7 bits (71), Expect = 0.36
Identities = 16/47 (34%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Frame = +2
Query: 416 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIA-LSGKDVLARAK 553
+E+E + ++L + ++G+ KP+PIQ SIP A L +D++ A+
Sbjct: 72 SEWEGLGVAPDILRALGDQGFSKPTPIQSLSIPPALLYHRDIIGAAE 118
>SB_51441| Best HMM Match : DEAD (HMM E-Value=4.9e-19)
Length = 304
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +2
Query: 491 PIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 595
P+Q +I L+ KD L G GKT Y IP L
Sbjct: 142 PMQRQAIDTLLAEKDSLILLPTGAGKTICYAIPAL 176
>SB_53581| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1584
Score = 28.3 bits (60), Expect = 7.8
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Frame = -2
Query: 573 PVLPVPFLALASTSFPLRAIGIEAS*IGDGFSHPFS-KI-PINNSRFKQNSSNSLP 412
P+LP L ++ +PLR+ + G ++ + +I P NSR QNS NSLP
Sbjct: 480 PILPTKRLLAVNSQYPLRSQAPQKQ-PGYFYNLDYQGRINPATNSRQTQNSLNSLP 534
>SB_3666| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 843
Score = 28.3 bits (60), Expect = 7.8
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = -2
Query: 522 RAIGIEAS*IGDGFSHPFSKIPINNSRFKQNS 427
RA+G+ ++ +G G S PF+ I +NN R N+
Sbjct: 476 RAVGLASADLG-GASDPFAVIEVNNQRLVTNT 506
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,748,249
Number of Sequences: 59808
Number of extensions: 406183
Number of successful extensions: 971
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 886
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 951
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2263654701
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -