Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_F_L16
(686 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0971 + 8169197-8169311,8170351-8170458,8170533-8170725,817... 245 3e-65
01_06_1654 - 38924090-38924101,38924183-38924215,38924737-389248... 235 2e-62
03_06_0563 - 34738732-34738890,34738965-34739009,34739154-347392... 230 9e-61
05_06_0014 + 24854462-24854570,24854958-24855065,24855240-248554... 225 3e-59
04_03_0812 - 19922208-19922357,19922448-19922564,19922681-199227... 114 5e-26
03_06_0382 - 33530943-33530966,33531160-33531360,33535494-33537026 85 5e-17
12_02_0028 - 12437332-12437576,12438436-12438537,12438619-124390... 28 6.0
11_06_0767 + 27121761-27123335,27123701-27123910,27124843-271249... 28 6.0
09_02_0286 - 6898041-6898144,6898881-6899005,6899158-6899207,689... 28 6.0
01_04_0010 - 15058175-15058195,15058320-15058430,15059031-150592... 28 6.0
09_06_0176 + 21351884-21352693,21352821-21352976,21353425-213536... 28 8.0
01_01_0588 + 4372877-4372949,4374328-4376262,4376940-4377015,437... 28 8.0
>07_01_0971 +
8169197-8169311,8170351-8170458,8170533-8170725,
8170811-8171069,8171151-8171207,8171433-8171480,
8171571-8171657,8171743-8171800,8171891-8171958,
8172066-8172161,8172244-8172291,8172658-8172696,
8172782-8172868,8173136-8173147
Length = 424
Score = 245 bits (599), Expect = 3e-65
Identities = 113/196 (57%), Positives = 145/196 (73%), Gaps = 2/196 (1%)
Frame = +1
Query: 103 DVFFEEKFPDDSWESNWVYSEHPGKE--FGKFKLTAGKFFSDPEDDKGLKTSEDARFYAL 276
+VFF+EKF +D WES WV SE E G++ T+GK+ DPED KG++TSED RFYA+
Sbjct: 30 EVFFQEKF-EDGWESRWVKSEWKKDENMAGEWNHTSGKWNGDPED-KGIQTSEDYRFYAI 87
Query: 277 SRKFKPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPYEIMFGPDIC 456
S ++ FSN+ K LV+QF+VKHEQ +DCGGGY+K+ ++QK G+TPY IMFGPDIC
Sbjct: 88 SAEYPEFSNKDKTLVLQFSVKHEQKLDCGGGYVKLLGGDVDQKKFGGDTPYSIMFGPDIC 147
Query: 457 GPGTKKVHVIFSYKGKNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGDLX 636
G TKKVH IF+ KNHLIKKD+ C+ D +H+YTLI+ PD TY +LIDN + +SG +
Sbjct: 148 GYSTKKVHTIFTKNDKNHLIKKDVPCETDQLSHVYTLIIHPDATYTILIDNVEKQSGSIY 207
Query: 637 ADWDFLPPKKIKDPEA 684
WD LPPK+IKDPEA
Sbjct: 208 EHWDILPPKQIKDPEA 223
>01_06_1654 -
38924090-38924101,38924183-38924215,38924737-38924829,
38924909-38924965,38925048-38925143,38925237-38925304,
38925429-38925486,38925572-38925658,38925935-38925982,
38926060-38926116,38926200-38926458,38926666-38926858,
38926991-38927098,38927849-38927957
Length = 425
Score = 235 bits (575), Expect = 2e-62
Identities = 104/196 (53%), Positives = 144/196 (73%), Gaps = 2/196 (1%)
Frame = +1
Query: 103 DVFFEEKFPDDSWESNWVYSEHPGKE--FGKFKLTAGKFFSDPEDDKGLKTSEDARFYAL 276
+V FEE+F +D WES WV S+ E G FK TAG++ DP DDKG++T+ DAR +A+
Sbjct: 28 EVIFEERF-EDGWESRWVKSDWKRSEGKAGTFKHTAGRYSGDP-DDKGIQTTLDARHFAI 85
Query: 277 SRKFKPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPYEIMFGPDIC 456
S K FSN+G+ LV+Q+++K EQDI+CGGGY+K+ + QK G+TPY +MFGPDIC
Sbjct: 86 SAKIPEFSNKGRTLVLQYSIKFEQDIECGGGYIKLMSGYVNQKKFSGDTPYSLMFGPDIC 145
Query: 457 GPGTKKVHVIFSYKGKNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGDLX 636
G TKK+H+I SY+G+N+ IKKD++C+ D TH+YT I++PD +Y +L+DN + ESG +
Sbjct: 146 GTQTKKLHLILSYQGQNYPIKKDLQCETDKLTHVYTFILRPDASYSILVDNRERESGSMY 205
Query: 637 ADWDFLPPKKIKDPEA 684
DWD LPP+KIKD A
Sbjct: 206 TDWDILPPRKIKDVHA 221
>03_06_0563 -
34738732-34738890,34738965-34739009,34739154-34739201,
34739291-34739386,34739467-34739534,34739633-34739690,
34739783-34739869,34740004-34740051,34740360-34740416,
34740525-34740783,34740877-34741102,34741168-34741275,
34741885-34741987
Length = 453
Score = 230 bits (562), Expect = 9e-61
Identities = 107/206 (51%), Positives = 141/206 (68%), Gaps = 12/206 (5%)
Frame = +1
Query: 103 DVFFEEKFPDDSWESNWVYSE--HPGKEFGKFKLTAGKFFSDPEDD----------KGLK 246
+VFF+EKF DD WE WV SE G++ T+GK++ D +D G++
Sbjct: 26 EVFFQEKF-DDGWEDRWVKSEWKKDDNRAGEWNHTSGKWYGDADDKGMCEVTLLLCAGIQ 84
Query: 247 TSEDARFYALSRKFKPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETP 426
TSED RFYA+S K+ FS++ K LV+QF+VKHEQ +DCGGGY+K+ ++QK GETP
Sbjct: 85 TSEDYRFYAISAKYPEFSSKDKTLVLQFSVKHEQKLDCGGGYVKLLGGDVDQKKFGGETP 144
Query: 427 YEIMFGPDICGPGTKKVHVIFSYKGKNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLID 606
Y IMFGPDICG TKKVH I + GKNHLIKKD+ CK D TH+YTLI++PD Y +LID
Sbjct: 145 YSIMFGPDICGYATKKVHAILTKNGKNHLIKKDVPCKTDQLTHVYTLIIRPDAKYSILID 204
Query: 607 NEKVESGDLXADWDFLPPKKIKDPEA 684
N + ++G + DW+ +PPK +DPEA
Sbjct: 205 NTEKQTGSIYDDWNIIPPKNKRDPEA 230
>05_06_0014 +
24854462-24854570,24854958-24855065,24855240-24855432,
24855892-24856150,24856236-24856292,24856370-24856417,
24856725-24856811,24856885-24856942,24857084-24857151,
24857279-24857374,24857483-24857539,24857906-24857952,
24858184-24858210,24858312-24858504
Length = 468
Score = 225 bits (549), Expect = 3e-59
Identities = 100/199 (50%), Positives = 140/199 (70%), Gaps = 2/199 (1%)
Frame = +1
Query: 94 INCDVFFEEKFPDDSWESNWVYSEHPGKE--FGKFKLTAGKFFSDPEDDKGLKTSEDARF 267
++ +V FEE+F DD W S WV S+ E G FK TAG + DP DD+G++T+ DA+
Sbjct: 25 VSGEVIFEERF-DDDWGSRWVKSDWKKSEGKAGTFKHTAGSYSGDP-DDRGIQTTSDAKH 82
Query: 268 YALSRKFKPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPYEIMFGP 447
+A+S KF FSN+ + LVVQ+++K EQDI+CGG Y+K+ + QK G+TPY MFGP
Sbjct: 83 FAISAKFPEFSNKNRTLVVQYSIKIEQDIECGGAYIKLMSGYVNQKKFGGDTPYSFMFGP 142
Query: 448 DICGPGTKKVHVIFSYKGKNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESG 627
DICG TKK+H+I SY+G+N+ IKKD++C+ D TH YT I++PD +Y +L+DN + E G
Sbjct: 143 DICGDQTKKLHLILSYQGQNYPIKKDLKCETDKLTHFYTFILRPDASYSLLVDNREREFG 202
Query: 628 DLXADWDFLPPKKIKDPEA 684
+ DWD LPP+KIK+ A
Sbjct: 203 SMYTDWDILPPRKIKESNA 221
>04_03_0812 -
19922208-19922357,19922448-19922564,19922681-19922752,
19922864-19923993,19924939-19925008,19925125-19925199
Length = 537
Score = 114 bits (275), Expect = 5e-26
Identities = 78/207 (37%), Positives = 110/207 (53%), Gaps = 14/207 (6%)
Frame = +1
Query: 103 DVFFEEKFPDDSWESNWVYSEHPGKEFGKFKLTAGKFFSDPEDDKGLKTSEDARFYALSR 282
D F E F D+S+E WV S GK+ K K SD +D GL SE A+ YA+ +
Sbjct: 24 DPLFYEPF-DESFEGRWVLS---GKDDYKGVWKHEK--SDGHEDYGLLVSEKAKKYAIIK 77
Query: 283 KF-KPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVF---DCKLEQKDMHGETPYEIMFGPD 450
+ +P + + +V+QF V+ + ++CGG YLK D + K+ ETPY IMFGPD
Sbjct: 78 ELDEPVTLKDGTVVLQFEVRLQNGLECGGAYLKYIRPQDAAWDAKEFDNETPYTIMFGPD 137
Query: 451 ICGPGTKKVHVIFSYK----GK--NHLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNE 612
CG T KVH I +K GK H +K D +H+YT I+KPDN +L+D E
Sbjct: 138 KCG-STNKVHFILKHKNPKTGKYVEHHLKFPPSVPYDKLSHVYTAILKPDNEVRILVDGE 196
Query: 613 KVESGDLXADWDF----LPPKKIKDPE 681
+ + + + DF +P K I DP+
Sbjct: 197 EKKKANFLSADDFEPSLIPSKTIPDPD 223
>03_06_0382 - 33530943-33530966,33531160-33531360,33535494-33537026
Length = 585
Score = 85.0 bits (201), Expect = 5e-17
Identities = 36/62 (58%), Positives = 45/62 (72%)
Frame = +1
Query: 499 GKNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGDLXADWDFLPPKKIKDP 678
G NHLIKKD+ C+ D TH+YTLI++PD Y +LIDN + +G + D D LPPKK KDP
Sbjct: 515 GNNHLIKKDVPCETDQLTHVYTLIIRPDAKYSILIDNTEKRTGSIYGDCDNLPPKKKKDP 574
Query: 679 EA 684
EA
Sbjct: 575 EA 576
>12_02_0028 -
12437332-12437576,12438436-12438537,12438619-12439009,
12439996-12440532
Length = 424
Score = 28.3 bits (60), Expect = 6.0
Identities = 9/23 (39%), Positives = 17/23 (73%)
Frame = -3
Query: 609 IVNEDFIGVVRFHNQSVQMCVDI 541
+V EDF+ + F +Q+V +C+D+
Sbjct: 353 LVEEDFVQIAEFLHQAVTICLDV 375
>11_06_0767 +
27121761-27123335,27123701-27123910,27124843-27124911,
27125387-27125656,27126027-27126377,27126480-27126757,
27126887-27128330
Length = 1398
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = -1
Query: 452 MSGPNIISYGVSPCMSFCSSLQSKTLRYPPPQSMSCSCLTVNWTTKGL 309
M GP ++ ++P S +Q + +++ +SC+CL T+KGL
Sbjct: 674 MLGPTVLV--LAPTRELASQIQDEAVKFGRSSRVSCTCL-YGGTSKGL 718
>09_02_0286 -
6898041-6898144,6898881-6899005,6899158-6899207,
6899245-6899386,6899951-6900020,6900077-6900216,
6900291-6900365,6901083-6904723
Length = 1448
Score = 28.3 bits (60), Expect = 6.0
Identities = 19/67 (28%), Positives = 32/67 (47%)
Frame = -1
Query: 359 QSMSCSCLTVNWTTKGLPSLLNGLNLRERA*NLASSEVFKPLSSSGSLKNFPAVNLNFPN 180
+S+ L+ N + G+P L GLN +++++ + P+ SSG L FP + N
Sbjct: 738 KSIGALDLSNNQLSGGIPPGLGGLNFLADF-DVSNNNLTGPIPSSGQLTTFPPSRYDNNN 796
Query: 179 SFPGCSL 159
G L
Sbjct: 797 GLCGIPL 803
>01_04_0010 -
15058175-15058195,15058320-15058430,15059031-15059246,
15059327-15059505,15059655-15059820,15059914-15059972,
15060065-15060107,15060285-15060354,15060458-15060547,
15060621-15060742,15060777-15060808,15060876-15061064,
15061148-15061241,15061325-15061412,15061498-15061718,
15061924-15061997,15062081-15062363,15062455-15062589,
15062721-15062942,15063029-15063208,15063305-15063402,
15063522-15063634,15064156-15064259,15064400-15064522,
15064857-15065192
Length = 1122
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/58 (25%), Positives = 28/58 (48%)
Frame = -3
Query: 423 GLSVHVLLLQFAVKDLKVSASTVNVLFMFDSELDDQGFTLITERFELTGESIEPRIFR 250
G V LL L ++ +T +V+ ++DS+ + Q +R G+ E ++FR
Sbjct: 598 GSEKFVFLLSTRAGGLGINLATADVVVLYDSDWNPQADLQAQDRAHRIGQKKEVQVFR 655
>09_06_0176 + 21351884-21352693,21352821-21352976,21353425-21353613,
21354741-21356354,21356446-21356553,21356649-21357509,
21357586-21357632,21358591-21358697,21359512-21359630,
21359706-21359915,21360412-21360693,21360820-21360952,
21361256-21361413,21362564-21362647,21362949-21363035
Length = 1654
Score = 27.9 bits (59), Expect = 8.0
Identities = 19/80 (23%), Positives = 33/80 (41%), Gaps = 1/80 (1%)
Frame = -1
Query: 239 PLSSSGSLKNFPAVNLNFPNSFPGCSLYTQLLSHESSGNFSSKNTSQFIEDNASKLTTTK 60
P + N A+ + N P S++ +LLS S + D+ + ++
Sbjct: 810 PYCVGKKIPNTDALLQHMRNKHPEGSVWPKLLSVLDPNLISDTSRGDHFSDDMTVYKDSE 869
Query: 59 YNS-FHFRFTVPPSSTKDRP 3
FHF+ +PP+ T RP
Sbjct: 870 EQYVFHFKRILPPAVTDQRP 889
>01_01_0588 +
4372877-4372949,4374328-4376262,4376940-4377015,
4378900-4378970,4379038-4379144,4379241-4379711,
4379791-4379976,4380132-4380425,4380820-4381434,
4382219-4382615,4382768-4382850,4383397-4383567,
4384046-4384243,4384754-4385314,4385401-4385460,
4385553-4385869,4385980-4386403,4386539-4387006,
4387093-4387209,4387306-4387427,4387506-4388247,
4388453-4388485,4388625-4388879,4388975-4389160,
4390115-4390453,4391293-4392045
Length = 3017
Score = 27.9 bits (59), Expect = 8.0
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1
Query: 598 LIDNEKVESGDLXADWDFLPPKKIKDPE 681
L DN K+++GDL +W P + PE
Sbjct: 107 LTDNSKLDTGDLHGEWKEWRPTQCSVPE 134
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,835,648
Number of Sequences: 37544
Number of extensions: 451486
Number of successful extensions: 1197
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1147
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1186
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1744894544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -