Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_L15
         (774 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L36067-1|AAA29362.1|  229|Anopheles gambiae polyubiquitin protein.     53   1e-08
AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR prot...    24   4.5  
AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR prot...    23   7.9  

>L36067-1|AAA29362.1|  229|Anopheles gambiae polyubiquitin protein.
          Length = 229

 Score = 52.8 bits (121), Expect = 1e-08
 Identities = 25/73 (34%), Positives = 47/73 (64%)
 Frame = +3

Query: 81  MLVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINS 260
           M + +KTL  +T  +E++P +T++ +K KI+ ++G     D QRLI+AGK L D   ++ 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 58

Query: 261 YNIDEKKFIVIMV 299
           YNI ++  + +++
Sbjct: 59  YNIQKESTLHLVL 71



 Score = 52.8 bits (121), Expect = 1e-08
 Identities = 25/73 (34%), Positives = 47/73 (64%)
 Frame = +3

Query: 81  MLVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINS 260
           M + +KTL  +T  +E++P +T++ +K KI+ ++G     D QRLI+AGK L D   ++ 
Sbjct: 77  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 134

Query: 261 YNIDEKKFIVIMV 299
           YNI ++  + +++
Sbjct: 135 YNIQKESTLHLVL 147



 Score = 52.8 bits (121), Expect = 1e-08
 Identities = 25/73 (34%), Positives = 47/73 (64%)
 Frame = +3

Query: 81  MLVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINS 260
           M + +KTL  +T  +E++P +T++ +K KI+ ++G     D QRLI+AGK L D   ++ 
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 210

Query: 261 YNIDEKKFIVIMV 299
           YNI ++  + +++
Sbjct: 211 YNIQKESTLHLVL 223


>AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR
           protein.
          Length = 460

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = +1

Query: 511 IWDMIGHKLNKHYAPHLIIEKEL*NI**QVFLKNCYMNKKLKKV 642
           + ++IG+ LN +Y P L++   + NI         + N KLKK+
Sbjct: 33  VMELIGNFLNFYYMPLLVVVGSIGNI----LSVLVFFNTKLKKL 72


>AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR
           protein.
          Length = 502

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -3

Query: 109 CCKVFSVTNIFTLFLLY 59
           CC++F +TN    F+LY
Sbjct: 413 CCQLFFMTNFGINFILY 429


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 679,526
Number of Sequences: 2352
Number of extensions: 11313
Number of successful extensions: 64
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 61
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 80665782
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)