Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_L11
         (683 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    31   0.009
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    23   3.1  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    21   9.4  

>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 31.1 bits (67), Expect = 0.009
 Identities = 14/49 (28%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
 Frame = +2

Query: 290 NQRYGESVYCGWSPDPNTKIKARDCVDK----WYSEINEFSFGKEPEVL 424
           N ++G  + C WS  PN  +++  C D     W  ++  FS   + E L
Sbjct: 9   NPQFGLQLECNWSSGPNATLQSSACTDDLSSCWSEDMGSFSLPLDLEPL 57


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 10/38 (26%), Positives = 25/38 (65%)
 Frame = -2

Query: 451 DYLCEMTTVQHFRLLAKGKLIDFAVPFIYAVSSFDLCI 338
           D+ C++ ++Q+F L+A  + ++  + F Y +S+++  I
Sbjct: 374 DFDCDINSIQYFCLMA--RCLNTLI-FYYHISTYEYSI 408


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = +2

Query: 113 MSRLFTSKSNDFENEALE 166
           + ++FT +  D++NE LE
Sbjct: 171 LRQVFTCRCKDYKNEDLE 188


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,343
Number of Sequences: 336
Number of extensions: 3251
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)