Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_F_L09
(745 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_21425| Best HMM Match : HSP20 (HMM E-Value=1.9e-26) 47 1e-05
SB_38963| Best HMM Match : HSP20 (HMM E-Value=7.3e-26) 43 3e-04
SB_37349| Best HMM Match : HSP20 (HMM E-Value=7.3e-26) 43 3e-04
SB_16632| Best HMM Match : HSP20 (HMM E-Value=1e-12) 43 3e-04
SB_21424| Best HMM Match : HSP20 (HMM E-Value=0) 41 0.001
SB_3291| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_58906| Best HMM Match : HSP20 (HMM E-Value=3e-26) 39 0.005
SB_58907| Best HMM Match : HSP20 (HMM E-Value=4.2e-05) 37 0.015
SB_49292| Best HMM Match : HSP20 (HMM E-Value=1.9e-29) 36 0.046
SB_38124| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_53603| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_24729| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-07) 29 5.3
SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_452| Best HMM Match : RVT_1 (HMM E-Value=9.9e-25) 29 5.3
SB_19540| Best HMM Match : Pro_isomerase (HMM E-Value=1.5e-23) 29 5.3
SB_33418| Best HMM Match : IQ (HMM E-Value=1.6) 28 7.0
SB_2841| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_30707| Best HMM Match : ARID (HMM E-Value=4e-35) 28 9.2
>SB_21425| Best HMM Match : HSP20 (HMM E-Value=1.9e-26)
Length = 185
Score = 47.2 bits (107), Expect = 1e-05
Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 1/91 (1%)
Frame = +1
Query: 349 ALQEMGSKITSNDEKFQVNIDVQHFSPDEINXXXXXXXXXXXXXXXXXQDQHGY-VSRQF 525
A E + T +D KF + +DV F P+E++ ++HG+ +RQF
Sbjct: 85 ATTENKAPATKDDTKFTLALDVSDFKPEEVDVKVYGHELSVRARQEC--EEHGFFTARQF 142
Query: 526 IRRYALPQGCLPDTVESKLSSDGVLTVTAPK 618
R + LP+ DT+ +L DGVL + A K
Sbjct: 143 NRHFVLPREVDMDTLVPRLGKDGVLYIEADK 173
Score = 46.0 bits (104), Expect = 3e-05
Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 1/93 (1%)
Frame = +1
Query: 388 EKFQV-NIDVQHFSPDEINXXXXXXXXXXXXXXXXXQDQHGYVSRQFIRRYALPQGCLPD 564
+KFQ+ +DV+ F P+EI + + G+ S++F R Y LP+G
Sbjct: 4 DKFQIATLDVREFKPEEITCKVENGKIKVSGLQRH-ESEEGFDSKEFRRCYNLPEGVDES 62
Query: 565 TVESKLSSDGVLTVTAPKVLALPSTGEKIVPIT 663
++ ++++ DG+L V A K + P+T E P T
Sbjct: 63 SISTRIAEDGMLHVEALK-KSPPATTENKAPAT 94
>SB_38963| Best HMM Match : HSP20 (HMM E-Value=7.3e-26)
Length = 190
Score = 42.7 bits (96), Expect = 3e-04
Identities = 24/91 (26%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Frame = +1
Query: 379 SNDEKFQV-NIDVQHFSPDEINXXXXXXXXXXXXXXXXXQDQHGYVSRQFIRRYALPQGC 555
+N+ K ++ +DV+ + P+EI+ + G+ ++F R +ALP+G
Sbjct: 2 ANENKLEIAKLDVREYRPEEISFKVENGFVKVQGRHVN-EGPFGFELKEFRRTFALPEGV 60
Query: 556 LPDTVESKLSSDGVLTVTAPKVLALPSTGEK 648
V++++S+ G L + A K L P GE+
Sbjct: 61 EASNVKTRISNHGQLHIEAMKALPGPDGGEE 91
Score = 38.7 bits (86), Expect = 0.005
Identities = 28/106 (26%), Positives = 45/106 (42%), Gaps = 2/106 (1%)
Frame = +1
Query: 334 AMNQMALQEMGSKITSNDEKFQVNIDVQHFSPDEINXXXXXXXXXXXXXXXXXQDQHGYV 513
AM + + G + + D+KF + +DV F PD I + H Y
Sbjct: 79 AMKALPGPDGGEEESKGDDKFSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGH-YH 137
Query: 514 SRQFIRRYALPQGCLPDTVESKLSSDGVLTVTAPK--VLALPSTGE 645
+ F R++ LP+ D++ ++L +G L A K ALP E
Sbjct: 138 AMHFNRQFVLPREVDMDSLTTRLDKEGKLHFEAKKRNAPALPPVRE 183
>SB_37349| Best HMM Match : HSP20 (HMM E-Value=7.3e-26)
Length = 190
Score = 42.7 bits (96), Expect = 3e-04
Identities = 24/91 (26%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Frame = +1
Query: 379 SNDEKFQV-NIDVQHFSPDEINXXXXXXXXXXXXXXXXXQDQHGYVSRQFIRRYALPQGC 555
+N+ K ++ +DV+ + P+EI+ + G+ ++F R +ALP+G
Sbjct: 2 ANENKLEIAKLDVREYRPEEISFKVENGFVKVQGRHVN-EGPFGFELKEFRRTFALPEGV 60
Query: 556 LPDTVESKLSSDGVLTVTAPKVLALPSTGEK 648
V++++S+ G L + A K L P GE+
Sbjct: 61 EASNVKTRISNHGQLHIEAMKALPGPDGGEE 91
Score = 38.7 bits (86), Expect = 0.005
Identities = 28/106 (26%), Positives = 45/106 (42%), Gaps = 2/106 (1%)
Frame = +1
Query: 334 AMNQMALQEMGSKITSNDEKFQVNIDVQHFSPDEINXXXXXXXXXXXXXXXXXQDQHGYV 513
AM + + G + + D+KF + +DV F PD I + H Y
Sbjct: 79 AMKALPGPDGGEEESKGDDKFSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGH-YH 137
Query: 514 SRQFIRRYALPQGCLPDTVESKLSSDGVLTVTAPK--VLALPSTGE 645
+ F R++ LP+ D++ ++L +G L A K ALP E
Sbjct: 138 AMHFNRQFVLPREVDMDSLTTRLDKEGKLHFEAKKRNAPALPPVRE 183
>SB_16632| Best HMM Match : HSP20 (HMM E-Value=1e-12)
Length = 210
Score = 42.7 bits (96), Expect = 3e-04
Identities = 22/71 (30%), Positives = 37/71 (52%)
Frame = +1
Query: 406 IDVQHFSPDEINXXXXXXXXXXXXXXXXXQDQHGYVSRQFIRRYALPQGCLPDTVESKLS 585
+DV+++ P+EI+ + +HGY + +F R Y LP G TV S+++
Sbjct: 45 LDVKNYRPEEISLKVEHGRIKIDGKHKS-EGEHGYETSEFHRSYNLPDGVDVSTVSSRIT 103
Query: 586 SDGVLTVTAPK 618
DG+L + A K
Sbjct: 104 GDGLLHIEALK 114
Score = 26.6 bits (56), Expect(2) = 0.22
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +1
Query: 529 RRYALPQGCLPDTVESKLSSDGVLTVTAPKVLALPSTGEKIVPI 660
R + LP+ D++ S+L DG L + A ++L P+ E+ V I
Sbjct: 161 RHFVLPKDVDMDSLVSRLGKDGKLYIEAKRILH-PTPHERQVNI 203
Score = 25.4 bits (53), Expect(2) = 0.22
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +1
Query: 382 NDEKFQVNIDVQHFSPD 432
+D++F V +DV FSPD
Sbjct: 139 DDKRFTVTLDVSSFSPD 155
>SB_21424| Best HMM Match : HSP20 (HMM E-Value=0)
Length = 424
Score = 41.1 bits (92), Expect = 0.001
Identities = 23/91 (25%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
Frame = +1
Query: 379 SNDEKFQV-NIDVQHFSPDEINXXXXXXXXXXXXXXXXXQDQHGYVSRQFIRRYALPQGC 555
+N+ K ++ +DV+ + P+EI+ + G+ ++F R + LP+G
Sbjct: 2 ANENKLEIAKLDVREYRPEEISFKVENGFVKVQGRHVN-EGPFGFELKEFRRTFTLPEGV 60
Query: 556 LPDTVESKLSSDGVLTVTAPKVLALPSTGEK 648
V++++S+ G L + A K L P GE+
Sbjct: 61 EASNVKTRISNHGQLHIEAMKALPGPDGGEE 91
Score = 39.1 bits (87), Expect = 0.004
Identities = 23/88 (26%), Positives = 41/88 (46%)
Frame = +1
Query: 385 DEKFQVNIDVQHFSPDEINXXXXXXXXXXXXXXXXXQDQHGYVSRQFIRRYALPQGCLPD 564
DE +DV+ + P+EI+ + G+ ++F R + LP+G
Sbjct: 239 DELEIAKLDVREYRPEEISFKVENGFVKVQGRHVN-EGPFGFELKEFRRTFTLPEGVEAS 297
Query: 565 TVESKLSSDGVLTVTAPKVLALPSTGEK 648
V++++S+ G L + A K L P GE+
Sbjct: 298 NVKTRISNHGQLHIEAMKALPGPDGGEE 325
Score = 38.7 bits (86), Expect = 0.005
Identities = 28/106 (26%), Positives = 45/106 (42%), Gaps = 2/106 (1%)
Frame = +1
Query: 334 AMNQMALQEMGSKITSNDEKFQVNIDVQHFSPDEINXXXXXXXXXXXXXXXXXQDQHGYV 513
AM + + G + + D+KF + +DV F PD I + H Y
Sbjct: 79 AMKALPGPDGGEEESKGDDKFSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGH-YH 137
Query: 514 SRQFIRRYALPQGCLPDTVESKLSSDGVLTVTAPK--VLALPSTGE 645
+ F R++ LP+ D++ ++L +G L A K ALP E
Sbjct: 138 AMHFNRQFVLPREVDMDSLTTRLDKEGKLHFEAKKRNAPALPPVRE 183
Score = 38.7 bits (86), Expect = 0.005
Identities = 28/106 (26%), Positives = 45/106 (42%), Gaps = 2/106 (1%)
Frame = +1
Query: 334 AMNQMALQEMGSKITSNDEKFQVNIDVQHFSPDEINXXXXXXXXXXXXXXXXXQDQHGYV 513
AM + + G + + D+KF + +DV F PD I + H Y
Sbjct: 313 AMKALPGPDGGEEESKGDDKFSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGH-YH 371
Query: 514 SRQFIRRYALPQGCLPDTVESKLSSDGVLTVTAPK--VLALPSTGE 645
+ F R++ LP+ D++ ++L +G L A K ALP E
Sbjct: 372 AMHFNRQFVLPREVDMDSLTTRLDKEGKLHFEAKKRNAPALPPVRE 417
>SB_3291| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 760
Score = 41.1 bits (92), Expect = 0.001
Identities = 23/91 (25%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
Frame = +1
Query: 379 SNDEKFQV-NIDVQHFSPDEINXXXXXXXXXXXXXXXXXQDQHGYVSRQFIRRYALPQGC 555
+N+ K ++ +DV+ + P+EI+ + G+ ++F R + LP+G
Sbjct: 2 ANENKLEIAKLDVREYRPEEISFKVENGFVKVQGRHVN-EGPFGFELKEFRRTFTLPEGV 60
Query: 556 LPDTVESKLSSDGVLTVTAPKVLALPSTGEK 648
V++++S+ G L + A K L P GE+
Sbjct: 61 EASNVKTRISNHGQLHIEAMKALPGPDGGEE 91
Score = 38.7 bits (86), Expect = 0.005
Identities = 28/106 (26%), Positives = 45/106 (42%), Gaps = 2/106 (1%)
Frame = +1
Query: 334 AMNQMALQEMGSKITSNDEKFQVNIDVQHFSPDEINXXXXXXXXXXXXXXXXXQDQHGYV 513
AM + + G + + D+KF + +DV F PD I + H Y
Sbjct: 79 AMKALPGPDGGEEESKGDDKFSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGH-YH 137
Query: 514 SRQFIRRYALPQGCLPDTVESKLSSDGVLTVTAPK--VLALPSTGE 645
+ F R++ LP+ D++ ++L +G L A K ALP E
Sbjct: 138 AMHFNRQFVLPREVDMDSLTTRLDKEGKLHFEAKKRNAPALPPVRE 183
>SB_58906| Best HMM Match : HSP20 (HMM E-Value=3e-26)
Length = 695
Score = 38.7 bits (86), Expect = 0.005
Identities = 27/96 (28%), Positives = 43/96 (44%), Gaps = 2/96 (2%)
Frame = +1
Query: 364 GSKITSNDEKFQVNIDVQHFSPDEINXXXXXXXXXXXXXXXXXQDQHGYVSRQFIRRYAL 543
G+K S D+KF + +DV+ F P+ I + H Y + F R++ L
Sbjct: 89 GAKKESKDDKFSMAMDVKGFPPEAIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQFIL 147
Query: 544 PQGCLPDTVESKLSSDGVLTVTAPK--VLALPSTGE 645
P+ D++ ++L +G L A K ALP E
Sbjct: 148 PREVDMDSLTTRLDKEGKLHFEAKKRNAPALPPVRE 183
>SB_58907| Best HMM Match : HSP20 (HMM E-Value=4.2e-05)
Length = 259
Score = 37.1 bits (82), Expect = 0.015
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +1
Query: 349 ALQEMGSKITSNDEKFQVNIDVQHFSPDEINXXXXXXXXXXXXXXXXXQDQHG-YVSRQF 525
A +E S T +D KF + +DV F P+E++ ++HG + +RQF
Sbjct: 13 ATKENQSAATKDDTKFTLALDVSDFKPEEVDVKVYGHELSVRARQEC--EEHGFFTARQF 70
Query: 526 IRRYALPQ 549
R + LPQ
Sbjct: 71 NRHFVLPQ 78
>SB_49292| Best HMM Match : HSP20 (HMM E-Value=1.9e-29)
Length = 189
Score = 35.5 bits (78), Expect = 0.046
Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 2/94 (2%)
Frame = +1
Query: 379 SNDEKFQVNIDVQHFSPDEINXXXXXXXXXXXXXXXXXQDQHGYVSRQFIRRYALPQGCL 558
+ ++KF + IDV F P+ I + H Y + F R++ LP+
Sbjct: 93 AKEDKFSMAIDVAGFPPESIKVQVLGNELLVNANHEVEHEGH-YHAMHFNRQFVLPREVD 151
Query: 559 PDTVESKLSSDGVLTVTAPKVL--ALPSTGEKIV 654
D++ ++L +G L A K + ALP E +V
Sbjct: 152 MDSLTTRLDKEGKLHFEAKKSVAPALPPVRELMV 185
>SB_38124| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 776
Score = 29.1 bits (62), Expect = 4.0
Identities = 19/72 (26%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Frame = -2
Query: 312 FHYVFYLSQSIFPGSVKLRFNNVAKLIERRHSVAVTMHRL-----VERRHPVEILRAEEF 148
+H+ F+L ++ F +LR +L H MH L +E ++P++ + E
Sbjct: 432 YHFYFWLCEASFGHRWELRLTTCLELSVIEHIGPQLMHFLKAADELENQYPIQPMDDETL 491
Query: 147 SIHQTKWSLQIV 112
S HQ K +V
Sbjct: 492 SEHQEKVDYTLV 503
>SB_53603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 456
Score = 28.7 bits (61), Expect = 5.3
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = -2
Query: 261 LRFNNVAKLIERRHSVAVTMHRLVERRHPVEILRAEEFSIHQTKW 127
L+FNN+ K+ ++ VAV + ++ R +LR++E +Q W
Sbjct: 319 LKFNNITKVSTQKPRVAVVLDQM---RQVYTLLRSKELHPNQRTW 360
>SB_24729| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-07)
Length = 310
Score = 28.7 bits (61), Expect = 5.3
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 5/76 (6%)
Frame = +1
Query: 91 MSIL--PYVYDLERPFRLMDRELF---GPQDFYRMSPFNQSMHRDRYRMSPFNQFRDVVE 255
MSIL P+VY L P R+ D+ L G + + F + D+ + +N+F +VE
Sbjct: 217 MSILYNPFVYALVNP-RVSDKNLRIGDGEYSIFSVRRFKEEKIADKGQNDQYNRFLGIVE 275
Query: 256 PQFYRPWENTLRQIEN 303
N ++EN
Sbjct: 276 YTIVEARANAGNKLEN 291
>SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4072
Score = 28.7 bits (61), Expect = 5.3
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +1
Query: 538 ALPQG-CLPDTVESKLSSDGVLTVTAPKVLALPSTGEKIVPITHTGP 675
A P+ +P+T+E+ ++ T +AP+ ALP T VP T T P
Sbjct: 2308 AAPENTAVPETIETPETTSAPETTSAPETTALPKT--TAVPETTTPP 2352
>SB_452| Best HMM Match : RVT_1 (HMM E-Value=9.9e-25)
Length = 1486
Score = 28.7 bits (61), Expect = 5.3
Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +3
Query: 255 TAVLQTLGKYFA--TNRKRNETDRAAGFGDESNGASGDGL*NHIQRREVS 398
+A+ +GKYF NR R+E D+ G G N SGD L NH VS
Sbjct: 426 SALANDIGKYFVEKINRLRDELDK--GCGASENVQSGD-LVNHCTVETVS 472
>SB_19540| Best HMM Match : Pro_isomerase (HMM E-Value=1.5e-23)
Length = 741
Score = 28.7 bits (61), Expect = 5.3
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = -2
Query: 372 FRAHLLKRHLIHRRSQLLDRFHYVFYLSQSIFPGSVKLRFNNVAK 238
F +LLK L R + LD F+ FY S F K+ FN++ K
Sbjct: 451 FHLNLLKTTLSERFVKELDLFYKAFYFSGKEFELFYKVFFNSLPK 495
>SB_33418| Best HMM Match : IQ (HMM E-Value=1.6)
Length = 344
Score = 28.3 bits (60), Expect = 7.0
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +1
Query: 277 ENTLRQIENVMKPIEQLASAMNQMALQEM 363
E TL +I+++ K EQL A N+M ++E+
Sbjct: 294 ELTLEEIKSLRKNFEQLIQAQNEMLVREL 322
>SB_2841| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3297
Score = 28.3 bits (60), Expect = 7.0
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +1
Query: 556 LPDTVESKLSSDGVLTVTAPKVLALPSTGEKIVPITHTGP 675
+P+T+E+ ++ T +AP+ ALP T VP T T P
Sbjct: 2858 VPETIETPETTSAPETTSAPETTALPKT--TAVPETTTPP 2895
>SB_30707| Best HMM Match : ARID (HMM E-Value=4e-35)
Length = 1338
Score = 27.9 bits (59), Expect = 9.2
Identities = 8/19 (42%), Positives = 15/19 (78%)
Frame = +3
Query: 630 TFDW*KDCSNNTYWSCDEE 686
+FDW ++ NNT+W+ ++E
Sbjct: 1223 SFDWLEEFENNTFWAVNKE 1241
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,127,679
Number of Sequences: 59808
Number of extensions: 464483
Number of successful extensions: 1364
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1160
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1355
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2010148439
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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