Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_L06
         (815 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9GPH3 Cluster: Activating transcription factor; n=1; B...    87   4e-16
UniRef50_UPI0000DB747D Cluster: PREDICTED: similar to CG8669-PA,...    50   9e-05
UniRef50_Q1ZXL5 Cluster: Putative uncharacterized protein; n=2; ...    35   2.8  
UniRef50_UPI0000D9D19D Cluster: PREDICTED: tubulin tyrosine liga...    33   6.5  
UniRef50_Q14679 Cluster: Tubulin--tyrosine ligase-like protein 4...    33   6.5  
UniRef50_P36132 Cluster: Putative glycoprotein endopeptidase KAE...    33   6.5  
UniRef50_UPI00015B4E9A Cluster: PREDICTED: similar to activating...    33   8.6  
UniRef50_Q98LL2 Cluster: Mlr0980 protein; n=2; Rhizobiales|Rep: ...    33   8.6  

>UniRef50_Q9GPH3 Cluster: Activating transcription factor; n=1;
           Bombyx mori|Rep: Activating transcription factor -
           Bombyx mori (Silk moth)
          Length = 236

 Score = 87.4 bits (207), Expect = 4e-16
 Identities = 45/65 (69%), Positives = 45/65 (69%)
 Frame = +3

Query: 621 AVLASSPFVTSQPTEELLREFETVYGAVEXXXXXXXXXXXXXXXXXXXSYAQQAQCTALX 800
           AVLASSPFVTSQPTEELLREFETVYGAVE                   SYAQQAQCTAL 
Sbjct: 18  AVLASSPFVTSQPTEELLREFETVYGAVELTHLTPPQSPPGPATQLLLSYAQQAQCTALA 77

Query: 801 PPAPL 815
           PPAPL
Sbjct: 78  PPAPL 82


>UniRef50_UPI0000DB747D Cluster: PREDICTED: similar to CG8669-PA,
           isoform A; n=1; Apis mellifera|Rep: PREDICTED: similar
           to CG8669-PA, isoform A - Apis mellifera
          Length = 357

 Score = 49.6 bits (113), Expect = 9e-05
 Identities = 31/74 (41%), Positives = 42/74 (56%)
 Frame = +3

Query: 486 LLQQLDSQCKQENIFSNWLEEKVDLPSIFENISEVPERVDPQPPAAVLASSPFVTSQPTE 665
           LL++LD   K+E  FS+WLEEK++LP IFE +           P   +  +P      T+
Sbjct: 64  LLEKLDEWIKEEP-FSDWLEEKIELP-IFEELPITENGQIKTTPYNEITKAP--QQDDTQ 119

Query: 666 ELLREFETVYGAVE 707
            LL+EFETV G VE
Sbjct: 120 TLLQEFETVLGDVE 133


>UniRef50_Q1ZXL5 Cluster: Putative uncharacterized protein; n=2;
           Dictyostelium discoideum|Rep: Putative uncharacterized
           protein - Dictyostelium discoideum AX4
          Length = 392

 Score = 34.7 bits (76), Expect = 2.8
 Identities = 21/60 (35%), Positives = 30/60 (50%)
 Frame = +3

Query: 486 LLQQLDSQCKQENIFSNWLEEKVDLPSIFENISEVPERVDPQPPAAVLASSPFVTSQPTE 665
           L QQL+ Q  +EN      EE  +L  I   I ++P +  PQP   V+ + P  T QP +
Sbjct: 242 LQQQLERQQNEEN-----QEEFDELVPILNEIPDIPVQTQPQPSIPVVKTKPPQTEQPPQ 296


>UniRef50_UPI0000D9D19D Cluster: PREDICTED: tubulin tyrosine
           ligase-like family, member 4 isoform 2; n=2;
           Catarrhini|Rep: PREDICTED: tubulin tyrosine ligase-like
           family, member 4 isoform 2 - Macaca mulatta
          Length = 970

 Score = 33.5 bits (73), Expect = 6.5
 Identities = 15/44 (34%), Positives = 27/44 (61%)
 Frame = +3

Query: 261 TMSASQKESWAAAIDLLTNDECRLLLEVEDFFNDDCDLLKNFPS 392
           T     ++ +A+ +D+LT D+ R+L+E+ED F+      + FPS
Sbjct: 757 TQKIPDQDFYASVLDVLTPDDVRILVEMEDEFSRRGQFERIFPS 800


>UniRef50_Q14679 Cluster: Tubulin--tyrosine ligase-like protein 4;
            n=26; Eumetazoa|Rep: Tubulin--tyrosine ligase-like
            protein 4 - Homo sapiens (Human)
          Length = 1199

 Score = 33.5 bits (73), Expect = 6.5
 Identities = 15/44 (34%), Positives = 27/44 (61%)
 Frame = +3

Query: 261  TMSASQKESWAAAIDLLTNDECRLLLEVEDFFNDDCDLLKNFPS 392
            T     ++ +A+ +D+LT D+ R+L+E+ED F+      + FPS
Sbjct: 986  TQKIPDQDFYASVLDVLTPDDVRILVEMEDEFSRRGQFERIFPS 1029


>UniRef50_P36132 Cluster: Putative glycoprotein endopeptidase KAE1;
           n=17; Eukaryota|Rep: Putative glycoprotein endopeptidase
           KAE1 - Saccharomyces cerevisiae (Baker's yeast)
          Length = 386

 Score = 33.5 bits (73), Expect = 6.5
 Identities = 15/34 (44%), Positives = 23/34 (67%)
 Frame = +2

Query: 131 HNIKMLAKMAPSQDKLVHLHKTPTSLDINPSGLL 232
           +NI+ LAK AP ++ LV L  T   +D++ SG+L
Sbjct: 210 YNIEQLAKKAPHKENLVELPYTVKGMDLSMSGIL 243


>UniRef50_UPI00015B4E9A Cluster: PREDICTED: similar to activating
           transcription factor; n=1; Nasonia vitripennis|Rep:
           PREDICTED: similar to activating transcription factor -
           Nasonia vitripennis
          Length = 434

 Score = 33.1 bits (72), Expect = 8.6
 Identities = 16/29 (55%), Positives = 23/29 (79%)
 Frame = +3

Query: 495 QLDSQCKQENIFSNWLEEKVDLPSIFENI 581
           +L S  K+E+ F++WLEEK+DLP IFE +
Sbjct: 69  ELKSWIKEES-FADWLEEKIDLP-IFEEL 95


>UniRef50_Q98LL2 Cluster: Mlr0980 protein; n=2; Rhizobiales|Rep:
           Mlr0980 protein - Rhizobium loti (Mesorhizobium loti)
          Length = 145

 Score = 33.1 bits (72), Expect = 8.6
 Identities = 14/32 (43%), Positives = 21/32 (65%)
 Frame = +3

Query: 603 DPQPPAAVLASSPFVTSQPTEELLREFETVYG 698
           DP PP +VL SSP V+  P ++L   ++T+ G
Sbjct: 65  DPTPPVSVLMSSPIVSCGPQDDLHSVWQTMAG 96


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 729,385,332
Number of Sequences: 1657284
Number of extensions: 13817481
Number of successful extensions: 36597
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 35353
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36579
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 70789333940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)