Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_L05
         (716 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    23   1.9  
AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein p...    23   1.9  
AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein p...    23   1.9  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       23   3.3  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    23   3.3  
DQ855489-1|ABH88176.1|  122|Tribolium castaneum chemosensory pro...    22   5.7  
AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16 pro...    22   5.7  
AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3 prot...    22   5.7  
AJ973444-1|CAJ01491.1|  122|Tribolium castaneum hypothetical pro...    22   5.7  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   7.6  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    21   7.6  

>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +1

Query: 19  CHGNNGASIISLKCLFT 69
           C G+N +S++SL CL T
Sbjct: 239 CLGSNTSSMLSLNCLNT 255


>AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein
          protein.
          Length = 142

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +1

Query: 19 CHGNNGASIISLKCLFT 69
          C G+N +S++SL CL T
Sbjct: 28 CLGSNTSSMLSLNCLNT 44


>AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein
          protein.
          Length = 142

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +1

Query: 19 CHGNNGASIISLKCLFT 69
          C G+N +S++SL CL T
Sbjct: 28 CLGSNTSSMLSLNCLNT 44


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = -2

Query: 550 FTSSVLANNSSSNGAISLNLPSLKSIKL 467
           FT++VL + S ++  + L +P    IKL
Sbjct: 105 FTNNVLVHRSQNSNDVCLAIPESLVIKL 132


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +1

Query: 19  CHGNNGASIISLKCL 63
           C G+N +S++SL CL
Sbjct: 239 CLGSNTSSMLSLNCL 253


>DQ855489-1|ABH88176.1|  122|Tribolium castaneum chemosensory
           protein 2 protein.
          Length = 122

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -2

Query: 457 RSIECDVIAVGCRKCD 410
           R +  D +  GCRKC+
Sbjct: 61  RDVIPDALITGCRKCN 76


>AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16
           protein.
          Length = 384

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 9/38 (23%), Positives = 17/38 (44%)
 Frame = +3

Query: 153 ISNWNGDFPNYPLTPADLKIPQAVMGALFQIFDRLGID 266
           +  WN     Y    A+  + QA++ ++    D+ G D
Sbjct: 100 MGGWNEGSQKYSQVAANPGLRQAMVTSVLSFIDQYGFD 137


>AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3
           protein.
          Length = 384

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 9/38 (23%), Positives = 17/38 (44%)
 Frame = +3

Query: 153 ISNWNGDFPNYPLTPADLKIPQAVMGALFQIFDRLGID 266
           +  WN     Y    A+  + QA++ ++    D+ G D
Sbjct: 100 MGGWNEGSQKYSQVAANPGLRQAMVTSVLSFIDQYGFD 137


>AJ973444-1|CAJ01491.1|  122|Tribolium castaneum hypothetical
           protein protein.
          Length = 122

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -2

Query: 457 RSIECDVIAVGCRKCD 410
           R +  D +  GCRKC+
Sbjct: 61  RDVIPDALITGCRKCN 76


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 5/14 (35%), Positives = 10/14 (71%)
 Frame = +3

Query: 144 ENFISNWNGDFPNY 185
           +N++  + G+ PNY
Sbjct: 375 QNYVQGYQGEHPNY 388


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 5/14 (35%), Positives = 10/14 (71%)
 Frame = +3

Query: 144 ENFISNWNGDFPNY 185
           +N++  + G+ PNY
Sbjct: 323 QNYVQGYQGEHPNY 336


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,106
Number of Sequences: 336
Number of extensions: 3096
Number of successful extensions: 15
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19051215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)