Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_L05
         (716 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0590 + 30177711-30178133,30178761-30179120,30179576-30180004     30   1.6  
06_03_0585 - 22528082-22530100                                         29   3.7  
06_03_0580 + 22489184-22491202                                         29   3.7  
02_05_1041 - 33713561-33714564,33714844-33714904,33715640-337159...    29   4.9  
06_01_0916 + 7058991-7059050,7060057-7061235,7061778-7063481,706...    28   6.4  

>02_05_0590 + 30177711-30178133,30178761-30179120,30179576-30180004
          Length = 403

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 18/43 (41%), Positives = 29/43 (67%), Gaps = 3/43 (6%)
 Frame = +3

Query: 513 FEEELFAK-TDEVKA--LESRKNKLLEMLNQQAEEKGKRAERL 632
           +EE L A  ++E +A  +E+R+    E + ++AEE+G RAERL
Sbjct: 67  WEEALAAAPSEEARAEMVEARRQTRRERVGRRAEERGARAERL 109


>06_03_0585 - 22528082-22530100
          Length = 672

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 17/40 (42%), Positives = 25/40 (62%)
 Frame = -3

Query: 546 PHLSWQIILPRMEQYPLISLH*KASN*KATEVLNATLLLS 427
           P LS + +LPR E +PL +LH +  + KA     A+L+LS
Sbjct: 248 PALSGEGVLPRGEFHPLAALHGRPRSEKALVADLASLVLS 287


>06_03_0580 + 22489184-22491202
          Length = 672

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 17/40 (42%), Positives = 25/40 (62%)
 Frame = -3

Query: 546 PHLSWQIILPRMEQYPLISLH*KASN*KATEVLNATLLLS 427
           P LS + +LPR E +PL +LH +  + KA     A+L+LS
Sbjct: 248 PALSGEGVLPRGEFHPLAALHGRPRSEKALVADLASLVLS 287


>02_05_1041 -
           33713561-33714564,33714844-33714904,33715640-33715951,
           33716780-33716917
          Length = 504

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = +3

Query: 525 LFAKTDEVKALESRKNKLLEMLNQQAEEK 611
           L A  DEVK L SR  KL EM+ +  ++K
Sbjct: 433 LLAYDDEVKELRSRVEKLEEMMKRNRKDK 461


>06_01_0916 +
           7058991-7059050,7060057-7061235,7061778-7063481,
           7063557-7064432,7064457-7064660,7065039-7065143,
           7065407-7065496,7066066-7066176,7066349-7066780
          Length = 1586

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = +2

Query: 350 HDTCDQSSCICYASSFYN*HIAFPATDSNNVAFNTSVAF-QFD 475
           H + + SS +  +S FY+     P TDS  V  NTSV F  FD
Sbjct: 144 HQSSNCSSGLAKSSGFYDHVKGPPMTDSIGVLSNTSVRFGDFD 186


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,686,411
Number of Sequences: 37544
Number of extensions: 286185
Number of successful extensions: 650
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 634
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 650
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1862792824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)