Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_F_L05
(716 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U29343-1|AAC52049.1| 725|Homo sapiens hyaluronan receptor protein. 34 0.44
BC108904-1|AAI08905.1| 725|Homo sapiens hyaluronan-mediated mot... 34 0.44
BC070281-1|AAH70281.1| 552|Homo sapiens HMMR protein protein. 34 0.44
BC057235-1|AAH57235.1| 613|Homo sapiens HMMR protein protein. 34 0.44
BC006984-1|AAH06984.1| 512|Homo sapiens Unknown (protein for IM... 34 0.44
AF032862-1|AAC32548.1| 724|Homo sapiens intracellular hyaluroni... 34 0.44
AK023978-1|BAB14750.1| 842|Homo sapiens protein ( Homo sapiens ... 31 5.4
BC017793-1|AAH17793.1| 331|Homo sapiens Unknown (protein for IM... 30 7.2
BC045542-1|AAH45542.1| 702|Homo sapiens KIF3A protein protein. 30 9.5
AM177178-1|CAJ45482.1| 725|Homo sapiens kinesin-like protein KI... 30 9.5
AF041853-1|AAC72294.1| 702|Homo sapiens kinesin family member p... 30 9.5
AB209780-1|BAD93017.1| 730|Homo sapiens Kinesin-like protein KI... 30 9.5
>U29343-1|AAC52049.1| 725|Homo sapiens hyaluronan receptor protein.
Length = 725
Score = 34.3 bits (75), Expect = 0.44
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +3
Query: 513 FEEELFAKTDEVKALESRKNKLLEMLNQQAEEKGKRAERLXNLDQDIK 656
FEEEL DE+ L+ ++ + ++ Q EE RAE L L++ +K
Sbjct: 375 FEEELKQTLDELDKLQQKEEQAERLVKQLEEEAKSRAEELKLLEEKLK 422
>BC108904-1|AAI08905.1| 725|Homo sapiens hyaluronan-mediated
motility receptor (RHAMM) protein.
Length = 725
Score = 34.3 bits (75), Expect = 0.44
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +3
Query: 513 FEEELFAKTDEVKALESRKNKLLEMLNQQAEEKGKRAERLXNLDQDIK 656
FEEEL DE+ L+ ++ + ++ Q EE RAE L L++ +K
Sbjct: 375 FEEELKQTLDELDKLQQKEEQAERLVKQLEEEAKSRAEELKLLEEKLK 422
Score = 30.3 bits (65), Expect = 7.2
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +3
Query: 501 DIAPFEEELFAKTDEVKALESRKNKLLEMLNQQAEEKGKRAERLXNLDQD 650
DIA EE L K DE+ +L+ + + +L++Q E+ + + L +D
Sbjct: 254 DIAQLEENLKEKNDEILSLKQSLEENIVILSKQVEDLNVKCQLLEKEKED 303
>BC070281-1|AAH70281.1| 552|Homo sapiens HMMR protein protein.
Length = 552
Score = 34.3 bits (75), Expect = 0.44
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +3
Query: 513 FEEELFAKTDEVKALESRKNKLLEMLNQQAEEKGKRAERLXNLDQDIK 656
FEEEL DE+ L+ ++ + ++ Q EE RAE L L++ +K
Sbjct: 359 FEEELKQTLDELDKLQQKEEQAERLVKQLEEEAKSRAEELKLLEEKLK 406
Score = 30.3 bits (65), Expect = 7.2
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +3
Query: 501 DIAPFEEELFAKTDEVKALESRKNKLLEMLNQQAEEKGKRAERLXNLDQD 650
DIA EE L K DE+ +L+ + + +L++Q E+ + + L +D
Sbjct: 238 DIAQLEENLKEKNDEILSLKQSLEENIVILSKQVEDLNVKCQLLEKEKED 287
>BC057235-1|AAH57235.1| 613|Homo sapiens HMMR protein protein.
Length = 613
Score = 34.3 bits (75), Expect = 0.44
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +3
Query: 513 FEEELFAKTDEVKALESRKNKLLEMLNQQAEEKGKRAERLXNLDQDIK 656
FEEEL DE+ L+ ++ + ++ Q EE RAE L L++ +K
Sbjct: 359 FEEELKQTLDELDKLQQKEEQAERLVKQLEEEAKSRAEELKLLEEKLK 406
Score = 30.3 bits (65), Expect = 7.2
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +3
Query: 501 DIAPFEEELFAKTDEVKALESRKNKLLEMLNQQAEEKGKRAERLXNLDQD 650
DIA EE L K DE+ +L+ + + +L++Q E+ + + L +D
Sbjct: 238 DIAQLEENLKEKNDEILSLKQSLEENIVILSKQVEDLNVKCQLLEKEKED 287
>BC006984-1|AAH06984.1| 512|Homo sapiens Unknown (protein for
IMAGE:3997460) protein.
Length = 512
Score = 34.3 bits (75), Expect = 0.44
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +3
Query: 513 FEEELFAKTDEVKALESRKNKLLEMLNQQAEEKGKRAERLXNLDQDIK 656
FEEEL DE+ L+ ++ + ++ Q EE RAE L L++ +K
Sbjct: 359 FEEELKQTLDELDKLQQKEEQAERLVKQLEEEAKSRAEELKLLEEKLK 406
Score = 30.3 bits (65), Expect = 7.2
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +3
Query: 501 DIAPFEEELFAKTDEVKALESRKNKLLEMLNQQAEEKGKRAERLXNLDQD 650
DIA EE L K DE+ +L+ + + +L++Q E+ + + L +D
Sbjct: 238 DIAQLEENLKEKNDEILSLKQSLEENIVILSKQVEDLNVKCQLLEKEKED 287
>AF032862-1|AAC32548.1| 724|Homo sapiens intracellular hyaluronic
acid binding protein protein.
Length = 724
Score = 34.3 bits (75), Expect = 0.44
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +3
Query: 513 FEEELFAKTDEVKALESRKNKLLEMLNQQAEEKGKRAERLXNLDQDIK 656
FEEEL DE+ L+ ++ + ++ Q EE RAE L L++ +K
Sbjct: 374 FEEELKQTLDELDKLQQKEEQAERLVKQLEEEAKSRAEELKLLEEKLK 421
Score = 30.3 bits (65), Expect = 7.2
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +3
Query: 501 DIAPFEEELFAKTDEVKALESRKNKLLEMLNQQAEEKGKRAERLXNLDQD 650
DIA EE L K DE+ +L+ + + +L++Q E+ + + L +D
Sbjct: 253 DIAQLEENLKEKNDEILSLKQSLEENIVILSKQVEDLNVKCQLLEKEKED 302
>AK023978-1|BAB14750.1| 842|Homo sapiens protein ( Homo sapiens
cDNA FLJ13916 fis, clone Y79AA1000342, moderately
similar to Homo sapiens Ciz1 mRNA. ).
Length = 842
Score = 30.7 bits (66), Expect = 5.4
Identities = 29/118 (24%), Positives = 45/118 (38%), Gaps = 2/118 (1%)
Frame = +3
Query: 285 PPPEENCNEHTIYYWDLLPVINMTRVINHLVSVMP--QVSTISISHFLQPTAITSHSIXX 458
PPP CN +YY + +I R +H V+ P T+ +F P H
Sbjct: 594 PPPRRWCNTCQLYY--MGDLIQHRRTQDHKVAKQPLRPFCTVCNRYFKTPRKFVEHVKSQ 651
Query: 459 XXXXXXXXXEGRLRDIAPFEEELFAKTDEVKALESRKNKLLEMLNQQAEEKGKRAERL 632
+ ++IA +E+ F D V E + E + + EE+ K E L
Sbjct: 652 GHKDKAKELKSLEKEIAGQDEDHFITVDAVGCFEGDEE---EEEDDEDEEEIKVEEEL 706
>BC017793-1|AAH17793.1| 331|Homo sapiens Unknown (protein for
IMAGE:4698833) protein.
Length = 331
Score = 30.3 bits (65), Expect = 7.2
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +3
Query: 501 DIAPFEEELFAKTDEVKALESRKNKLLEMLNQQAEEKGKRAERLXNLDQD 650
DIA EE L K DE+ +L+ + + +L++Q E+ + + L +D
Sbjct: 238 DIAQLEENLKEKNDEILSLKQSLEENIVILSKQVEDLNVKCQLLEKEKED 287
>BC045542-1|AAH45542.1| 702|Homo sapiens KIF3A protein protein.
Length = 702
Score = 29.9 bits (64), Expect = 9.5
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +3
Query: 495 LRDIAPFEEELFAKTDEVKALESRKNKLLEMLNQQAEEKGKRAERL 632
L ++ E+++ ++ A + KLLE N + EE+ KRAE+L
Sbjct: 472 LEKLSALEKKVIVGGVDLLAKAEEQEKLLEESNMELEERRKRAEQL 517
>AM177178-1|CAJ45482.1| 725|Homo sapiens kinesin-like protein
KIF3Abeta protein.
Length = 725
Score = 29.9 bits (64), Expect = 9.5
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +3
Query: 495 LRDIAPFEEELFAKTDEVKALESRKNKLLEMLNQQAEEKGKRAERL 632
L ++ E+++ ++ A + KLLE N + EE+ KRAE+L
Sbjct: 495 LEKLSALEKKVIVGGVDLLAKAEEQEKLLEESNMELEERRKRAEQL 540
>AF041853-1|AAC72294.1| 702|Homo sapiens kinesin family member
protein KIF3A protein.
Length = 702
Score = 29.9 bits (64), Expect = 9.5
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +3
Query: 495 LRDIAPFEEELFAKTDEVKALESRKNKLLEMLNQQAEEKGKRAERL 632
L ++ E+++ ++ A + KLLE N + EE+ KRAE+L
Sbjct: 472 LEKLSALEKKVIVGGVDLLAKAEEQEKLLEESNMELEERRKRAEQL 517
>AB209780-1|BAD93017.1| 730|Homo sapiens Kinesin-like protein KIF3A
variant protein.
Length = 730
Score = 29.9 bits (64), Expect = 9.5
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +3
Query: 495 LRDIAPFEEELFAKTDEVKALESRKNKLLEMLNQQAEEKGKRAERL 632
L ++ E+++ ++ A + KLLE N + EE+ KRAE+L
Sbjct: 500 LEKLSALEKKVIVGGVDLLAKAEEQEKLLEESNMELEERRKRAEQL 545
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,898,974
Number of Sequences: 237096
Number of extensions: 1595991
Number of successful extensions: 3459
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 3281
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3459
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8399192100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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