Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_L05
         (716 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical pr...    30   1.4  
Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical pr...    30   1.4  
X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy ch...    30   1.4  
U80032-4|AAL16309.2| 1553|Caenorhabditis elegans Hypothetical pr...    30   1.9  
AF025458-2|AAB70978.1|  557|Caenorhabditis elegans Hypothetical ...    29   4.4  

>Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical protein
            T18D3.4 protein.
          Length = 1947

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 16/51 (31%), Positives = 28/51 (54%)
 Frame = +3

Query: 501  DIAPFEEELFAKTDEVKALESRKNKLLEMLNQQAEEKGKRAERLXNLDQDI 653
            D+A   EEL AK      L+ + +  L+   +QAEE+ +  + L NL +++
Sbjct: 1302 DLARQVEELEAKIQAANRLKLQFSNELDHAKRQAEEESRERQNLSNLSKNL 1352


>Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical protein
            T18D3.4 protein.
          Length = 1947

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 16/51 (31%), Positives = 28/51 (54%)
 Frame = +3

Query: 501  DIAPFEEELFAKTDEVKALESRKNKLLEMLNQQAEEKGKRAERLXNLDQDI 653
            D+A   EEL AK      L+ + +  L+   +QAEE+ +  + L NL +++
Sbjct: 1302 DLARQVEELEAKIQAANRLKLQFSNELDHAKRQAEEESRERQNLSNLSKNL 1352


>X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy chain 2
            protein.
          Length = 1947

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 16/51 (31%), Positives = 28/51 (54%)
 Frame = +3

Query: 501  DIAPFEEELFAKTDEVKALESRKNKLLEMLNQQAEEKGKRAERLXNLDQDI 653
            D+A   EEL AK      L+ + +  L+   +QAEE+ +  + L NL +++
Sbjct: 1302 DLARQVEELEAKIQAANRLKLQFSNELDHAKRQAEEESRERQNLSNLSKNL 1352


>U80032-4|AAL16309.2| 1553|Caenorhabditis elegans Hypothetical protein
            C32E12.4 protein.
          Length = 1553

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
 Frame = +3

Query: 504  IAPFEEELFAKTDEVKALESRKNKLLEM-LNQQAEEKGKR 620
            +AP EEE   K  E +  + RK K LEM  N++ EEK K+
Sbjct: 1002 LAPTEEEKRKKKQEEEEEKKRKEKELEMKKNKEEEEKLKK 1041


>AF025458-2|AAB70978.1|  557|Caenorhabditis elegans Hypothetical
           protein C01B12.5 protein.
          Length = 557

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = +1

Query: 367 IILYLLCLKFLQLAYRISCNRQQ*RRIQYFCCF 465
           ++++LLC   L + YRI  N+ Q    +  C F
Sbjct: 36  LLIWLLCYSILSVIYRILLNKAQREVFEQLCTF 68


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,134,670
Number of Sequences: 27780
Number of extensions: 274544
Number of successful extensions: 750
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 723
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 750
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1676746902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)