Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_L04
         (759 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory pro...    27   0.21 
DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory pro...    22   6.1  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    22   6.1  

>DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory
           protein 7 protein.
          Length = 127

 Score = 26.6 bits (56), Expect = 0.21
 Identities = 11/36 (30%), Positives = 21/36 (58%)
 Frame = +2

Query: 275 SSICTKCQRNSLERIAKL*QLDSAKKMLNWKKIKKQ 382
           SS CTKC +   E   K+ +  + K+  +W+++ K+
Sbjct: 71  SSGCTKCNQKQKETAEKVIRHLTQKRARDWERLSKK 106


>DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory
           protein 19 protein.
          Length = 119

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 10/32 (31%), Positives = 13/32 (40%)
 Frame = +2

Query: 278 SICTKCQRNSLERIAKL*QLDSAKKMLNWKKI 373
           S C KC     E   K+    S  K   WK++
Sbjct: 68  SDCAKCSEKQKEMTKKVIHFLSHNKQQMWKEL 99


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 6/35 (17%), Positives = 21/35 (60%)
 Frame = -1

Query: 216 MYISILFYYIYIHWERLYSLKLKDIHFVHSCTEYL 112
           +++ ++ Y  +I W+++  ++ ++  F  +  +YL
Sbjct: 100 VFVVVMGYIGFIEWDKVEIVRSQEGRFEEAVIDYL 134


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,581
Number of Sequences: 336
Number of extensions: 2913
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20338724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)