Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_K24
         (504 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein ...    24   3.4  
AY578795-1|AAT07300.1|  441|Anopheles gambiae Gbb-60A2 protein.        23   4.5  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    23   4.5  
DQ383732-1|ABD47743.1|  201|Anopheles gambiae IAP-antagonist mic...    23   5.9  

>CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein
           protein.
          Length = 615

 Score = 23.8 bits (49), Expect = 3.4
 Identities = 13/37 (35%), Positives = 16/37 (43%)
 Frame = +1

Query: 145 LTRKENTVDLKGDSGVPQITEIFIGDGCPTGYGRAQD 255
           LTR  NTV    D  VPQ  +    +G P    +  D
Sbjct: 107 LTRHLNTVKFSFDEPVPQKPDNAAAEGAPKPQRKLSD 143


>AY578795-1|AAT07300.1|  441|Anopheles gambiae Gbb-60A2 protein.
          Length = 441

 Score = 23.4 bits (48), Expect = 4.5
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +1

Query: 16 MFRQYALCVTVLLLINVSGI 75
          MFR+Y+LC   ++L  + G+
Sbjct: 1  MFRKYSLCAAAIVLYVLIGL 20


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 23.4 bits (48), Expect = 4.5
 Identities = 9/23 (39%), Positives = 17/23 (73%)
 Frame = +2

Query: 191 SRKSRRYSSEMVAQLVMAERKIT 259
           +RK++R+  + +AQL + + KIT
Sbjct: 673 ARKAKRWDEKHMAQLKLQKEKIT 695


>DQ383732-1|ABD47743.1|  201|Anopheles gambiae IAP-antagonist
           michelob_x protein.
          Length = 201

 Score = 23.0 bits (47), Expect = 5.9
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -2

Query: 59  ISNSTVTHNAYCRNIS 12
           I N+   +N YCRNIS
Sbjct: 158 IYNNNYYYNYYCRNIS 173


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 451,514
Number of Sequences: 2352
Number of extensions: 8943
Number of successful extensions: 15
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 45245913
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)