Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_K24
         (504 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81586-3|CAB04691.1|  203|Caenorhabditis elegans Hypothetical pr...    27   5.8  
Z68215-15|CAN86580.1| 1544|Caenorhabditis elegans Hypothetical p...    27   5.8  
Z68215-11|CAH60786.1| 1301|Caenorhabditis elegans Hypothetical p...    27   5.8  
Z68215-6|CAB54213.2| 1304|Caenorhabditis elegans Hypothetical pr...    27   5.8  
Z68215-5|CAA92456.1| 1586|Caenorhabditis elegans Hypothetical pr...    27   5.8  
Z68215-4|CAA92457.1| 1584|Caenorhabditis elegans Hypothetical pr...    27   5.8  
U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical pr...    27   7.7  

>Z81586-3|CAB04691.1|  203|Caenorhabditis elegans Hypothetical
           protein T05F1.4 protein.
          Length = 203

 Score = 27.5 bits (58), Expect = 5.8
 Identities = 15/49 (30%), Positives = 24/49 (48%)
 Frame = +3

Query: 66  IRNKMFQRHFTINRRCDIQWHFQCHSFNS*RKYS*LERRFWSPANHGDI 212
           IR+    RH + +RR +       H FN+ R+ +    R  SP+NH  +
Sbjct: 33  IRDNQSDRHLSPDRRSNHSEDRHEHRFNNYRQQNRPNSRTPSPSNHNQV 81


>Z68215-15|CAN86580.1| 1544|Caenorhabditis elegans Hypothetical
            protein C53B4.4e protein.
          Length = 1544

 Score = 27.5 bits (58), Expect = 5.8
 Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
 Frame = -2

Query: 188  PESPFKSTVFSLRVKTVALKVPLNITP--SIDGEVTLKHFIPDTLISNSTVTHNAYCRNI 15
            PES  ++ +  L V   A +V    TP  S           PD++ S+ST T N+   NI
Sbjct: 1031 PESTTRTVIRYLNVTVHAKEVKSAGTPTTSATNVPNATPSTPDSIASSSTNTDNSVPTNI 1090

Query: 14   SVD 6
            S D
Sbjct: 1091 SAD 1093


>Z68215-11|CAH60786.1| 1301|Caenorhabditis elegans Hypothetical
           protein C53B4.4d protein.
          Length = 1301

 Score = 27.5 bits (58), Expect = 5.8
 Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
 Frame = -2

Query: 188 PESPFKSTVFSLRVKTVALKVPLNITP--SIDGEVTLKHFIPDTLISNSTVTHNAYCRNI 15
           PES  ++ +  L V   A +V    TP  S           PD++ S+ST T N+   NI
Sbjct: 751 PESTTRTVIRYLNVTVHAKEVKSAGTPTTSATNVPNATPSTPDSIASSSTNTDNSVPTNI 810

Query: 14  SVD 6
           S D
Sbjct: 811 SAD 813


>Z68215-6|CAB54213.2| 1304|Caenorhabditis elegans Hypothetical
           protein C53B4.4c protein.
          Length = 1304

 Score = 27.5 bits (58), Expect = 5.8
 Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
 Frame = -2

Query: 188 PESPFKSTVFSLRVKTVALKVPLNITP--SIDGEVTLKHFIPDTLISNSTVTHNAYCRNI 15
           PES  ++ +  L V   A +V    TP  S           PD++ S+ST T N+   NI
Sbjct: 751 PESTTRTVIRYLNVTVHAKEVKSAGTPTTSATNVPNATPSTPDSIASSSTNTDNSVPTNI 810

Query: 14  SVD 6
           S D
Sbjct: 811 SAD 813


>Z68215-5|CAA92456.1| 1586|Caenorhabditis elegans Hypothetical protein
            C53B4.4b protein.
          Length = 1586

 Score = 27.5 bits (58), Expect = 5.8
 Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
 Frame = -2

Query: 188  PESPFKSTVFSLRVKTVALKVPLNITP--SIDGEVTLKHFIPDTLISNSTVTHNAYCRNI 15
            PES  ++ +  L V   A +V    TP  S           PD++ S+ST T N+   NI
Sbjct: 1033 PESTTRTVIRYLNVTVHAKEVKSAGTPTTSATNVPNATPSTPDSIASSSTNTDNSVPTNI 1092

Query: 14   SVD 6
            S D
Sbjct: 1093 SAD 1095


>Z68215-4|CAA92457.1| 1584|Caenorhabditis elegans Hypothetical protein
            C53B4.4a protein.
          Length = 1584

 Score = 27.5 bits (58), Expect = 5.8
 Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
 Frame = -2

Query: 188  PESPFKSTVFSLRVKTVALKVPLNITP--SIDGEVTLKHFIPDTLISNSTVTHNAYCRNI 15
            PES  ++ +  L V   A +V    TP  S           PD++ S+ST T N+   NI
Sbjct: 1031 PESTTRTVIRYLNVTVHAKEVKSAGTPTTSATNVPNATPSTPDSIASSSTNTDNSVPTNI 1090

Query: 14   SVD 6
            S D
Sbjct: 1091 SAD 1093


>U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical protein
            ZK783.1 protein.
          Length = 2585

 Score = 27.1 bits (57), Expect = 7.7
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +1

Query: 226  CPTGYGRAQDNTCQLIIE 279
            CPTG+ +A D +CQ I E
Sbjct: 1478 CPTGFRKADDGSCQDIDE 1495


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,856,222
Number of Sequences: 27780
Number of extensions: 198531
Number of successful extensions: 513
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 510
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 513
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 967231538
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)