Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_K22
         (574 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              23   1.6  
AF134818-1|AAD40234.1|  130|Apis mellifera lambda crystallin-lik...    23   1.6  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    23   2.1  
AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter...    23   2.1  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   2.8  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   2.8  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    22   3.8  
AB252421-1|BAE80739.1|  122|Apis mellifera GB15078 protein.            21   6.6  

>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = +1

Query: 502  PCSATSAPRSQTTWRAR 552
            PC A   P  + TW+ R
Sbjct: 1297 PCLAVGVPAPEVTWKVR 1313


>AF134818-1|AAD40234.1|  130|Apis mellifera lambda crystallin-like
           protein protein.
          Length = 130

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = -3

Query: 92  FGPRMKHKTEISEKLFNMFNRVTCTLD 12
           FGP  K + E++EK+ N  N + C L+
Sbjct: 81  FGPVPKFEGEMAEKISNELNEM-CPLE 106


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +1

Query: 229 GKEKENTSTEEPSKSI 276
           G +KEN  TEEP+  +
Sbjct: 310 GSDKENHKTEEPNDEV 325


>AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter
           Am-EAAT protein.
          Length = 543

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 11/33 (33%), Positives = 15/33 (45%)
 Frame = +1

Query: 163 ENLVKLCFAFSEFNYRKSPCLKGKEKENTSTEE 261
           ENLV+ CF  ++  Y       G   E T  +E
Sbjct: 197 ENLVQACFQQAQTTYVTKEVATGTASEITQIQE 229


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 9/18 (50%), Positives = 9/18 (50%)
 Frame = +1

Query: 490 ATSRPCSATSAPRSQTTW 543
           A S  CSA   P  Q TW
Sbjct: 438 AVSLKCSAAGNPTPQVTW 455


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 9/18 (50%), Positives = 9/18 (50%)
 Frame = +1

Query: 490 ATSRPCSATSAPRSQTTW 543
           A S  CSA   P  Q TW
Sbjct: 438 AVSLKCSAAGNPTPQVTW 455


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = +1

Query: 172 VKLCFAFSEFNYRKSPCLKGKEKENTSTEEP 264
           +++   FSEF Y   P  +  E  + S +EP
Sbjct: 523 LRMILYFSEFAYLGKPTKEDSEWPSYSRDEP 553


>AB252421-1|BAE80739.1|  122|Apis mellifera GB15078 protein.
          Length = 122

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +1

Query: 505 CSATSAPRSQTTW 543
           C AT  PR + TW
Sbjct: 44  CMATGFPRPEITW 56


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,374
Number of Sequences: 438
Number of extensions: 1986
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16504155
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)