Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_F_K17
(857 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110490-13|CAB54454.1| 377|Caenorhabditis elegans Hypothetical... 172 2e-43
AL110490-12|CAB54447.1| 326|Caenorhabditis elegans Hypothetical... 121 6e-28
U61945-4|AAB03127.2| 172|Caenorhabditis elegans Hypothetical pr... 33 0.20
Z83117-6|CAN86902.1| 1931|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z83117-5|CAN86901.1| 1971|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z83117-4|CAB05572.2| 2032|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z80219-10|CAN86596.1| 1931|Caenorhabditis elegans Hypothetical p... 31 1.1
Z80219-9|CAN86595.1| 1971|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z80219-8|CAB02303.2| 2032|Caenorhabditis elegans Hypothetical pr... 31 1.1
AJ276020-1|CAC81668.1| 1971|Caenorhabditis elegans putative TRP ... 31 1.1
Z68000-4|CAA91972.4| 1342|Caenorhabditis elegans Hypothetical pr... 31 1.4
Z50739-4|CAA90605.4| 1342|Caenorhabditis elegans Hypothetical pr... 31 1.4
Z81513-12|CAE17799.1| 417|Caenorhabditis elegans Hypothetical p... 30 2.4
AF016445-10|AAC69056.2| 178|Caenorhabditis elegans Hypothetical... 30 2.4
AL117206-5|CAB60448.2| 345|Caenorhabditis elegans Hypothetical ... 29 3.2
Z66497-6|CAA91288.1| 312|Caenorhabditis elegans Hypothetical pr... 28 9.8
Z66497-5|CAA91287.1| 340|Caenorhabditis elegans Hypothetical pr... 28 9.8
AF078788-3|AAC26966.1| 547|Caenorhabditis elegans Hypothetical ... 28 9.8
AF025471-4|AAB71063.1| 151|Caenorhabditis elegans Hypothetical ... 28 9.8
>AL110490-13|CAB54454.1| 377|Caenorhabditis elegans Hypothetical
protein Y48B6A.13b protein.
Length = 377
Score = 172 bits (419), Expect = 2e-43
Identities = 97/252 (38%), Positives = 146/252 (57%), Gaps = 12/252 (4%)
Frame = +2
Query: 83 TVIAPVNIAVIKYWGKRDEKLILPLNDSVSATFDTSVMCAKTSVSTHPDFVEDQIWLNGK 262
TV P+NIA++KYWGKRD+ LILPLNDS+S T D + A+T++ P + + +NGK
Sbjct: 13 TVRVPMNIALVKYWGKRDDLLILPLNDSISLTVDR--LTAETTIRMVPGVGKHTVEINGK 70
Query: 263 E-ESFSNPRLQN----CLREIKSRAVAEKTIAED------VLSWKVHVSSENNFPTXXXX 409
E SN R Q LR + R AE + A+ + + HV+S NFP
Sbjct: 71 SVELSSNKRYQTVFDEALRLQRKRKEAEASSADSNGNDPPPIFYHFHVTSTTNFPVAAGL 130
Query: 410 XXXXXXXXCLVSALAKLYKIK-SDVSSIARLGSGSACRSVYGGFVRWHAGSKPDGSDSIA 586
+ A+ ++ ++ S + +AR+GSGSACRS+YGG V W G DGSD +A
Sbjct: 131 ASSAAGFAAIALAIQRILRLDDSQANRLARIGSGSACRSMYGGLVHWRKGEMDDGSDCLA 190
Query: 587 TQIADSNHWPEMRVLVLVVGNTQKKVSSTVGMKISSETSELLKHRIQHCVPQRTERIIXA 766
+ + +W ++ ++LV + +KKV S+ GM+ S ETS+LLKHRI+ VPQR ++I A
Sbjct: 191 VRTEAAANWEDLYCIILVFDDGRKKVGSSEGMRRSRETSQLLKHRIESIVPQRIQQIQEA 250
Query: 767 IKNKDFYKFAEI 802
+++F + A +
Sbjct: 251 YTSRNFEQLARV 262
Score = 34.7 bits (76), Expect = 0.085
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +1
Query: 763 SYKEQRLL*ICRDTMKDSNQFHAICLXSYPP 855
+Y + + R M DSNQFHA+C+ S PP
Sbjct: 250 AYTSRNFEQLARVIMADSNQFHAVCMDSTPP 280
>AL110490-12|CAB54447.1| 326|Caenorhabditis elegans Hypothetical
protein Y48B6A.13a protein.
Length = 326
Score = 121 bits (292), Expect = 6e-28
Identities = 71/201 (35%), Positives = 110/201 (54%), Gaps = 12/201 (5%)
Frame = +2
Query: 236 EDQIWLNGKE-ESFSNPRLQN----CLREIKSRAVAEKTIAED------VLSWKVHVSSE 382
E + +NGK E SN R Q LR + R AE + A+ + + HV+S
Sbjct: 11 EATVEINGKSVELSSNKRYQTVFDEALRLQRKRKEAEASSADSNGNDPPPIFYHFHVTST 70
Query: 383 NNFPTXXXXXXXXXXXXCLVSALAKLYKIK-SDVSSIARLGSGSACRSVYGGFVRWHAGS 559
NFP + A+ ++ ++ S + +AR+GSGSACRS+YGG V W G
Sbjct: 71 TNFPVAAGLASSAAGFAAIALAIQRILRLDDSQANRLARIGSGSACRSMYGGLVHWRKGE 130
Query: 560 KPDGSDSIATQIADSNHWPEMRVLVLVVGNTQKKVSSTVGMKISSETSELLKHRIQHCVP 739
DGSD +A + + +W ++ ++LV + +KKV S+ GM+ S ETS+LLKHRI+ VP
Sbjct: 131 MDDGSDCLAVRTEAAANWEDLYCIILVFDDGRKKVGSSEGMRRSRETSQLLKHRIESIVP 190
Query: 740 QRTERIIXAIKNKDFYKFAEI 802
QR ++I A +++F + A +
Sbjct: 191 QRIQQIQEAYTSRNFEQLARV 211
Score = 34.7 bits (76), Expect = 0.085
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +1
Query: 763 SYKEQRLL*ICRDTMKDSNQFHAICLXSYPP 855
+Y + + R M DSNQFHA+C+ S PP
Sbjct: 199 AYTSRNFEQLARVIMADSNQFHAVCMDSTPP 229
>U61945-4|AAB03127.2| 172|Caenorhabditis elegans Hypothetical
protein C49C8.2 protein.
Length = 172
Score = 33.5 bits (73), Expect = 0.20
Identities = 22/83 (26%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Frame = +2
Query: 566 DGSDSIATQIADSNHWPEMRVLVLVVGNTQKKVS--STVGMKIS-SETSELLKHRIQHCV 736
+ + I T I ++ + R+ ++ T + V+ T+ ++S S EL+ +H +
Sbjct: 5 NAAKEIVTAIQKADAEMKTRIQKMMKHRTLEDVAVLQTMLERVSQSSNKELISDFNKHQI 64
Query: 737 PQRTERIIXAIKNKDFYKFAEIQ 805
PQR +++ +KN + FAEIQ
Sbjct: 65 PQRLQKVASLVKNSHGHYFAEIQ 87
>Z83117-6|CAN86902.1| 1931|Caenorhabditis elegans Hypothetical protein
T01H8.5d protein.
Length = 1931
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/57 (31%), Positives = 28/57 (49%)
Frame = -1
Query: 713 LIIQMFLKIFSFLQLN*LSFEYYQLQVLKHAFQANDSNLQFVWL*NRYHQVLSQHAT 543
L++ FL I + L ++ L + + H F A D Q +WL RY QV+ +T
Sbjct: 1433 LLMTFFLLIANILLMSML------IAIFNHIFDATDEMSQQIWLFQRYKQVMEYEST 1483
>Z83117-5|CAN86901.1| 1971|Caenorhabditis elegans Hypothetical protein
T01H8.5c protein.
Length = 1971
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/57 (31%), Positives = 28/57 (49%)
Frame = -1
Query: 713 LIIQMFLKIFSFLQLN*LSFEYYQLQVLKHAFQANDSNLQFVWL*NRYHQVLSQHAT 543
L++ FL I + L ++ L + + H F A D Q +WL RY QV+ +T
Sbjct: 1473 LLMTFFLLIANILLMSML------IAIFNHIFDATDEMSQQIWLFQRYKQVMEYEST 1523
>Z83117-4|CAB05572.2| 2032|Caenorhabditis elegans Hypothetical protein
T01H8.5a protein.
Length = 2032
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/57 (31%), Positives = 28/57 (49%)
Frame = -1
Query: 713 LIIQMFLKIFSFLQLN*LSFEYYQLQVLKHAFQANDSNLQFVWL*NRYHQVLSQHAT 543
L++ FL I + L ++ L + + H F A D Q +WL RY QV+ +T
Sbjct: 1534 LLMTFFLLIANILLMSML------IAIFNHIFDATDEMSQQIWLFQRYKQVMEYEST 1584
>Z80219-10|CAN86596.1| 1931|Caenorhabditis elegans Hypothetical
protein T01H8.5d protein.
Length = 1931
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/57 (31%), Positives = 28/57 (49%)
Frame = -1
Query: 713 LIIQMFLKIFSFLQLN*LSFEYYQLQVLKHAFQANDSNLQFVWL*NRYHQVLSQHAT 543
L++ FL I + L ++ L + + H F A D Q +WL RY QV+ +T
Sbjct: 1433 LLMTFFLLIANILLMSML------IAIFNHIFDATDEMSQQIWLFQRYKQVMEYEST 1483
>Z80219-9|CAN86595.1| 1971|Caenorhabditis elegans Hypothetical protein
T01H8.5c protein.
Length = 1971
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/57 (31%), Positives = 28/57 (49%)
Frame = -1
Query: 713 LIIQMFLKIFSFLQLN*LSFEYYQLQVLKHAFQANDSNLQFVWL*NRYHQVLSQHAT 543
L++ FL I + L ++ L + + H F A D Q +WL RY QV+ +T
Sbjct: 1473 LLMTFFLLIANILLMSML------IAIFNHIFDATDEMSQQIWLFQRYKQVMEYEST 1523
>Z80219-8|CAB02303.2| 2032|Caenorhabditis elegans Hypothetical protein
T01H8.5a protein.
Length = 2032
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/57 (31%), Positives = 28/57 (49%)
Frame = -1
Query: 713 LIIQMFLKIFSFLQLN*LSFEYYQLQVLKHAFQANDSNLQFVWL*NRYHQVLSQHAT 543
L++ FL I + L ++ L + + H F A D Q +WL RY QV+ +T
Sbjct: 1534 LLMTFFLLIANILLMSML------IAIFNHIFDATDEMSQQIWLFQRYKQVMEYEST 1584
>AJ276020-1|CAC81668.1| 1971|Caenorhabditis elegans putative TRP
homologous cationchannel protein.
Length = 1971
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/57 (31%), Positives = 28/57 (49%)
Frame = -1
Query: 713 LIIQMFLKIFSFLQLN*LSFEYYQLQVLKHAFQANDSNLQFVWL*NRYHQVLSQHAT 543
L++ FL I + L ++ L + + H F A D Q +WL RY QV+ +T
Sbjct: 1473 LLMTFFLLIANILLMSML------IAIFNHIFDATDEMSQQIWLFQRYKQVMEYEST 1523
>Z68000-4|CAA91972.4| 1342|Caenorhabditis elegans Hypothetical protein
F13D2.1 protein.
Length = 1342
Score = 30.7 bits (66), Expect = 1.4
Identities = 19/46 (41%), Positives = 27/46 (58%)
Frame = -3
Query: 285 LGFENDSSFPFNQI*SSTKSG*VDTDVLAHITLVSKVALTESFNGK 148
L F NDS P N S+ + T+++++ TL KVAL+ES GK
Sbjct: 1084 LYFLNDSYTPINPSSSALGLHFIITNIVSNQTLCYKVALSESRGGK 1129
>Z50739-4|CAA90605.4| 1342|Caenorhabditis elegans Hypothetical protein
F13D2.1 protein.
Length = 1342
Score = 30.7 bits (66), Expect = 1.4
Identities = 19/46 (41%), Positives = 27/46 (58%)
Frame = -3
Query: 285 LGFENDSSFPFNQI*SSTKSG*VDTDVLAHITLVSKVALTESFNGK 148
L F NDS P N S+ + T+++++ TL KVAL+ES GK
Sbjct: 1084 LYFLNDSYTPINPSSSALGLHFIITNIVSNQTLCYKVALSESRGGK 1129
>Z81513-12|CAE17799.1| 417|Caenorhabditis elegans Hypothetical
protein F26D2.16 protein.
Length = 417
Score = 29.9 bits (64), Expect = 2.4
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +2
Query: 152 PLNDSVSATFDTSVMCAKTSVSTHPDFVEDQIW 250
P+ +V +V C + S+ HPD+++DQI+
Sbjct: 3 PIQCAVFLCLALAVACQERSLLRHPDYIQDQIY 35
>AF016445-10|AAC69056.2| 178|Caenorhabditis elegans Hypothetical
protein T05B4.4 protein.
Length = 178
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +2
Query: 683 KISSETSELLKHRIQHCVPQRTERIIXAIKNKDFYKFAEIQ*KTVISFMQF 835
K + E S+ H+ Q +T+R + I+N+ +KF+++Q K F F
Sbjct: 21 KFNVELSDYKLHKFQI---HKTQRFLLKIENRPLFKFSKLQVKQFFQFFGF 68
>AL117206-5|CAB60448.2| 345|Caenorhabditis elegans Hypothetical
protein Y67A10A.7 protein.
Length = 345
Score = 29.5 bits (63), Expect = 3.2
Identities = 13/55 (23%), Positives = 26/55 (47%)
Frame = +2
Query: 572 SDSIATQIADSNHWPEMRVLVLVVGNTQKKVSSTVGMKISSETSELLKHRIQHCV 736
++ + + DS HWP ++L + M ++S+ E++KH + H V
Sbjct: 113 TNRVVEMLPDSKHWPRSTRVIL--------LQCIANMAVASDNMEVMKHALNHIV 159
>Z66497-6|CAA91288.1| 312|Caenorhabditis elegans Hypothetical
protein K08F8.5b protein.
Length = 312
Score = 27.9 bits (59), Expect = 9.8
Identities = 15/53 (28%), Positives = 30/53 (56%)
Frame = +2
Query: 575 DSIATQIADSNHWPEMRVLVLVVGNTQKKVSSTVGMKISSETSELLKHRIQHC 733
+ + + + S +WPE +L V NT+K V+ V ++ +T++ L+H + C
Sbjct: 65 EMVRCEYSASMYWPEHGLLGCV--NTEKLVAHFVDNEMQIKTTKKLEHLLVLC 115
>Z66497-5|CAA91287.1| 340|Caenorhabditis elegans Hypothetical
protein K08F8.5a protein.
Length = 340
Score = 27.9 bits (59), Expect = 9.8
Identities = 15/53 (28%), Positives = 30/53 (56%)
Frame = +2
Query: 575 DSIATQIADSNHWPEMRVLVLVVGNTQKKVSSTVGMKISSETSELLKHRIQHC 733
+ + + + S +WPE +L V NT+K V+ V ++ +T++ L+H + C
Sbjct: 93 EMVRCEYSASMYWPEHGLLGCV--NTEKLVAHFVDNEMQIKTTKKLEHLLVLC 143
>AF078788-3|AAC26966.1| 547|Caenorhabditis elegans Hypothetical
protein ZC190.6 protein.
Length = 547
Score = 27.9 bits (59), Expect = 9.8
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = -3
Query: 204 LAHITLVSKVALTESFNGKINFSSRFPQYF--ITAIFTGAITVTMLLIFNKKR 52
L H T V V L + + F YF IT++FT I V L+++ KR
Sbjct: 453 LIHFTFVIVVWLLSTLENSRYYQMTFSHYFENITSVFT--ICVPFLVVYKHKR 503
>AF025471-4|AAB71063.1| 151|Caenorhabditis elegans Hypothetical
protein R52.6 protein.
Length = 151
Score = 27.9 bits (59), Expect = 9.8
Identities = 18/64 (28%), Positives = 27/64 (42%)
Frame = -3
Query: 816 TVFHCISANL*KSLFFIAXIIRSVLWGTQCCIRCFNNSDVSEDIFIPTVELTFF*VLPTT 637
T+F S +L F + ++ V+ T+CC+R D +P E T T
Sbjct: 3 TIFSFFSKHLFDMNIFCSIVLCFVITITECCMRTIPPDDAYISSTLPYEETTEMMTTMET 62
Query: 636 STKT 625
ST T
Sbjct: 63 STMT 66
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,753,816
Number of Sequences: 27780
Number of extensions: 396190
Number of successful extensions: 931
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 899
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 930
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2139963672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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