Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_F_K15
(791 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 47 2e-07
AF321227-6|AAK16426.1| 150|Tribolium castaneum Pb protein. 26 0.30
AF187068-1|AAF03888.1| 477|Tribolium castaneum proboscipedia or... 26 0.30
AM292357-1|CAL23169.2| 355|Tribolium castaneum gustatory recept... 24 1.6
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 23 2.1
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 23 2.1
DQ211693-1|ABB16909.1| 314|Tribolium castaneum dorsocross protein. 23 3.7
AM292368-1|CAL23180.2| 387|Tribolium castaneum gustatory recept... 23 3.7
AM292347-1|CAL23159.2| 387|Tribolium castaneum gustatory recept... 23 3.7
AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory recept... 23 3.7
AM292327-1|CAL23139.2| 387|Tribolium castaneum gustatory recept... 23 3.7
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 22 4.9
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 22 4.9
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 22 4.9
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 22 4.9
AJ307577-1|CAC84070.1| 301|Tribolium castaneum dachshund protein. 22 6.5
>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
adhesion molecule splicevariant 3.12.3.1 protein.
Length = 1639
Score = 46.8 bits (106), Expect = 2e-07
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Frame = +2
Query: 560 NHNTWKLRVSNVQPNDSGTYMCQVNTDPMKSQMG---HLSVVIPPDIVDSATEGXSAQXG 730
+HN LR+ +V+ D G Y C + D ++ L P + A + Q G
Sbjct: 369 DHNEAVLRIESVRKEDKGMYQCFIRNDQESAEATAELKLGGRFEPPQIRHAFNEETVQPG 428
Query: 731 GSIXLTCTATGLPTPAVLW 787
S+ L C A+G PTP + W
Sbjct: 429 NSVFLKCIASGNPTPEITW 447
Score = 39.1 bits (87), Expect = 4e-05
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Frame = +2
Query: 578 LRVSNVQPNDSGTYMCQV-NTDPMKSQMGHLSVVIPPDIVDSATEGXSAQXGGSIXLTCT 754
L + NVQ G Y C N+ + + L + +PP + T+ AQ G + C
Sbjct: 663 LSIDNVQSTHVGNYTCLASNSASVTTYTTSLFINVPPRWILEPTDKAFAQ-GSDAAVECK 721
Query: 755 ATGLPTPAVLWR 790
A G P P V W+
Sbjct: 722 ADGFPRPVVTWK 733
Score = 35.9 bits (79), Expect = 4e-04
Identities = 33/154 (21%), Positives = 57/154 (37%), Gaps = 2/154 (1%)
Frame = +2
Query: 332 SVLVTAEMPTQTEAEP-EFLQALENHTVTLGRDVHFTCVVNHLSNYRVAWIKSDSKAILA 508
S TAE+ EP + A TV G V C+ + + W + + +
Sbjct: 398 SAEATAELKLGGRFEPPQIRHAFNEETVQPGNSVFLKCIASGNPTPEITW-ELYGRRLSN 456
Query: 509 IHTNMVALNPRLSVTYNNHNTWKLRVSNVQPNDSGTYMCQVNTD-PMKSQMGHLSVVIPP 685
N + VT N L ++ + ND G Y C ++ ++V P
Sbjct: 457 SERNQIGQY----VTVNGDVVSHLNITAIHTNDGGLYRCVASSKVGSADHSARINVYGLP 512
Query: 686 DIVDSATEGXSAQXGGSIXLTCTATGLPTPAVLW 787
+ + E + GG++ + C G P +V+W
Sbjct: 513 FV--RSMEKQAIVAGGTLIVHCPFAGHPVDSVVW 544
Score = 32.3 bits (70), Expect = 0.005
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Frame = +2
Query: 578 LRVSNVQPNDSGTYMCQ-VN-TDPMKSQMGHLSVVIPPDIVDSATEGXSAQXGGSIXLTC 751
L ++N+Q + G Y+C+ VN S + +SV PP D +++ G L C
Sbjct: 760 LTINNIQKTNEGYYLCEAVNGIGSGLSAVIQISVQAPPQF-DIKLRNQTSRRGDPAVLQC 818
Query: 752 TATGLPTPAVLW 787
A G +LW
Sbjct: 819 EAKGEKPIGILW 830
Score = 27.5 bits (58), Expect = 0.13
Identities = 16/70 (22%), Positives = 24/70 (34%)
Frame = +2
Query: 578 LRVSNVQPNDSGTYMCQVNTDPMKSQMGHLSVVIPPDIVDSATEGXSAQXGGSIXLTCTA 757
L + + DSG Y+C VN + + V P + + G TC
Sbjct: 292 LIIREAKVEDSGKYLCVVNNSVGGESVETVLTVTAPLKAKIEPQVQTIDFGRPATFTCNF 351
Query: 758 TGLPTPAVLW 787
G P + W
Sbjct: 352 EGNPIKTISW 361
Score = 26.2 bits (55), Expect = 0.30
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +2
Query: 737 IXLTCTATGLPTPAVLWR 790
+ L C A GLP P + W+
Sbjct: 1324 VTLPCLAVGLPPPVITWK 1341
Score = 25.0 bits (52), Expect = 0.69
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = +2
Query: 578 LRVSNVQPNDSGTYMCQVNTDPMKSQMGHLSVVIPP 685
L + +V N++G Y C V D + + H +V P
Sbjct: 1361 LFIRDVSRNNAGEYSCHVENDYGQDSVTHQLIVNAP 1396
Score = 23.4 bits (48), Expect = 2.1
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +2
Query: 749 CTATGLPTPAVLW 787
C+A G PTP ++W
Sbjct: 45 CSAHGNPTPDIIW 57
Score = 23.0 bits (47), Expect = 2.8
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = +2
Query: 734 SIXLTCTATGLPTPAVLW 787
++ L C A G P+P+ W
Sbjct: 249 NVALLCPAQGFPSPSFRW 266
>AF321227-6|AAK16426.1| 150|Tribolium castaneum Pb protein.
Length = 150
Score = 26.2 bits (55), Expect = 0.30
Identities = 16/48 (33%), Positives = 20/48 (41%)
Frame = +2
Query: 641 PMKSQMGHLSVVIPPDIVDSATEGXSAQXGGSIXLTCTATGLPTPAVL 784
P++ GHL D V T S + GG A+G P PA L
Sbjct: 6 PLRMPTGHLD---DDDFVVVKTRSNSPEAGGGGFWLAAASGAPHPAAL 50
>AF187068-1|AAF03888.1| 477|Tribolium castaneum proboscipedia
ortholog protein.
Length = 477
Score = 26.2 bits (55), Expect = 0.30
Identities = 16/48 (33%), Positives = 20/48 (41%)
Frame = +2
Query: 641 PMKSQMGHLSVVIPPDIVDSATEGXSAQXGGSIXLTCTATGLPTPAVL 784
P++ GHL D V T S + GG A+G P PA L
Sbjct: 6 PLRMPTGHLD---DDDFVVVKTRSNSPEAGGGGFWLAAASGAPHPAAL 50
>AM292357-1|CAL23169.2| 355|Tribolium castaneum gustatory receptor
candidate 36 protein.
Length = 355
Score = 23.8 bits (49), Expect = 1.6
Identities = 12/47 (25%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
Frame = -3
Query: 414 VTVW--FSRACRNSGSASVCVGISAVTNTLKNVASHQAAFVDVENMC 280
+T W S + R + +G+ T+T+ V + FV + N C
Sbjct: 51 LTTWTVISASTRIKSFKFLTIGVGITTDTIDRVFTVAIPFVGIANSC 97
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 23.4 bits (48), Expect = 2.1
Identities = 12/41 (29%), Positives = 18/41 (43%)
Frame = +2
Query: 650 SQMGHLSVVIPPDIVDSATEGXSAQXGGSIXLTCTATGLPT 772
S M L +PPD + T G + ++ L A +PT
Sbjct: 226 SSMALLGFTLPPDSGEKLTLGVTILLSLTVFLNLVAEKIPT 266
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 23.4 bits (48), Expect = 2.1
Identities = 12/41 (29%), Positives = 18/41 (43%)
Frame = +2
Query: 650 SQMGHLSVVIPPDIVDSATEGXSAQXGGSIXLTCTATGLPT 772
S M L +PPD + T G + ++ L A +PT
Sbjct: 226 SSMALLGFTLPPDSGEKLTLGVTILLSLTVFLNLVAEKIPT 266
>DQ211693-1|ABB16909.1| 314|Tribolium castaneum dorsocross protein.
Length = 314
Score = 22.6 bits (46), Expect = 3.7
Identities = 13/40 (32%), Positives = 16/40 (40%)
Frame = -2
Query: 124 NYSLSARGRYERGKSENLAPKLTSSESTIPRRAPQYTHRP 5
NY+ A+G E GKS +L S P T P
Sbjct: 192 NYNPFAKGFRENGKSSAKRKQLVSEHPDSPNSKKSATPSP 231
>AM292368-1|CAL23180.2| 387|Tribolium castaneum gustatory receptor
candidate 47 protein.
Length = 387
Score = 22.6 bits (46), Expect = 3.7
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +2
Query: 407 TVTLGRDVHFTCVVNHLSNYRVAWI 481
T L +DV C +++YRV W+
Sbjct: 208 TKVLFKDVDRNCSAYIIAHYRVLWL 232
>AM292347-1|CAL23159.2| 387|Tribolium castaneum gustatory receptor
candidate 26 protein.
Length = 387
Score = 22.6 bits (46), Expect = 3.7
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +2
Query: 407 TVTLGRDVHFTCVVNHLSNYRVAWI 481
T L +DV C +++YRV W+
Sbjct: 208 TKVLFKDVDRNCSAYIIAHYRVLWL 232
>AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory receptor
candidate 19 protein.
Length = 355
Score = 22.6 bits (46), Expect = 3.7
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +1
Query: 214 LMIVLCLYQYYLRSRVETLH 273
L+I+LC+Y +Y + T+H
Sbjct: 232 LIILLCIYYFYYAFILFTVH 251
Score = 21.4 bits (43), Expect = 8.5
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = +1
Query: 217 MIVLCLYQYYLRSRVETLH 273
+I+LC+Y +Y + T+H
Sbjct: 108 IILLCVYYFYYAFIIFTVH 126
Score = 21.4 bits (43), Expect = 8.5
Identities = 7/20 (35%), Positives = 12/20 (60%)
Frame = +1
Query: 214 LMIVLCLYQYYLRSRVETLH 273
L +LC+Y +Y + T+H
Sbjct: 140 LFFLLCIYYFYCAFIIFTVH 159
Score = 21.4 bits (43), Expect = 8.5
Identities = 6/20 (30%), Positives = 13/20 (65%)
Frame = +1
Query: 214 LMIVLCLYQYYLRSRVETLH 273
L+ +LC+Y ++ + T+H
Sbjct: 160 LLFLLCIYHFFCAFIIFTMH 179
>AM292327-1|CAL23139.2| 387|Tribolium castaneum gustatory receptor
candidate 6 protein.
Length = 387
Score = 22.6 bits (46), Expect = 3.7
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +2
Query: 407 TVTLGRDVHFTCVVNHLSNYRVAWI 481
T L +DV C +++YRV W+
Sbjct: 208 TKVLFKDVDRNCSAYIIAHYRVLWL 232
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 22.2 bits (45), Expect = 4.9
Identities = 8/29 (27%), Positives = 16/29 (55%)
Frame = -1
Query: 737 YCRLXEPXYLQLPNRLYPVGSLQISDPSD 651
Y R+ +P Y + ++ + +ISD +D
Sbjct: 600 YLRVVDPDYYEFETHIFFDDAFEISDHND 628
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 22.2 bits (45), Expect = 4.9
Identities = 8/29 (27%), Positives = 16/29 (55%)
Frame = -1
Query: 737 YCRLXEPXYLQLPNRLYPVGSLQISDPSD 651
Y R+ +P Y + ++ + +ISD +D
Sbjct: 600 YLRVVDPDYYEFETHIFFDDAFEISDHND 628
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 22.2 bits (45), Expect = 4.9
Identities = 8/29 (27%), Positives = 16/29 (55%)
Frame = -1
Query: 737 YCRLXEPXYLQLPNRLYPVGSLQISDPSD 651
Y R+ +P Y + ++ + +ISD +D
Sbjct: 600 YLRVVDPDYYEFETHIFFDDAFEISDHND 628
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 22.2 bits (45), Expect = 4.9
Identities = 8/29 (27%), Positives = 16/29 (55%)
Frame = -1
Query: 737 YCRLXEPXYLQLPNRLYPVGSLQISDPSD 651
Y R+ +P Y + ++ + +ISD +D
Sbjct: 600 YLRVVDPDYYEFETHIFFDDAFEISDHND 628
>AJ307577-1|CAC84070.1| 301|Tribolium castaneum dachshund protein.
Length = 301
Score = 21.8 bits (44), Expect = 6.5
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = +1
Query: 343 DSGDADTNRGGARIPASPG 399
D D D + G +PA+PG
Sbjct: 240 DDKDQDMDEGDLPLPAAPG 258
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 201,424
Number of Sequences: 336
Number of extensions: 4518
Number of successful extensions: 33
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21480183
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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