Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_K15
         (791 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_03_0068 - 12188426-12188767                                         33   0.26 
03_06_0147 - 31980352-31981629                                         30   2.4  
08_02_0192 + 14048828-14048873,14048960-14051169                       29   5.6  
04_04_0976 + 29839697-29840350                                         28   7.4  
03_05_0545 + 25419031-25420758                                         28   7.4  
02_05_0718 + 31203358-31203717,31203826-31204011                       28   7.4  
08_01_0540 + 4691929-4692014,4692915-4693125,4693756-4693885,469...    28   9.8  

>01_03_0068 - 12188426-12188767
          Length = 113

 Score = 33.1 bits (72), Expect = 0.26
 Identities = 27/68 (39%), Positives = 30/68 (44%), Gaps = 4/68 (5%)
 Frame = +1

Query: 346 SGDA-DTNRGGARIP-ASPGEPHCDSGTRRALYMRRQPPLKLQGGV--DKVRFESNLGDS 513
           SGD  +   GG   P  S G  H  SG RR L+ R    L   G +  D  R  S  G  
Sbjct: 20  SGDRLELEAGGGSPPYGSSGGRH--SGGRRGLWRRHGSSLHAHGSIAGDNGRCRSGDGLK 77

Query: 514 HEHGGSEP 537
           HE GGS P
Sbjct: 78  HEAGGSSP 85


>03_06_0147 - 31980352-31981629
          Length = 425

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 16/51 (31%), Positives = 22/51 (43%)
 Frame = +3

Query: 513 TRTWWL*TLASPSRTITTIRGSCASATCSRTIPVHTCVKSTPIQ*KVRWVT 665
           T  WW+    SP+  +    G  A AT      + T V  TP+  +V  VT
Sbjct: 198 TGAWWVTDAMSPAEGLVAASGVAAGATAWWRTSIGTAVGYTPVTGRVDLVT 248


>08_02_0192 + 14048828-14048873,14048960-14051169
          Length = 751

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = -3

Query: 603 FGCTLLTRSFHVLWLLYVTERR 538
           F  TLLTR FH+   LY T  R
Sbjct: 720 FSVTLLTREFHIFMYLYFTASR 741


>04_04_0976 + 29839697-29840350
          Length = 217

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 23/78 (29%), Positives = 31/78 (39%), Gaps = 6/78 (7%)
 Frame = +1

Query: 334 CISDSGDADTNRGGARIPASPGEP------HCDSGTRRALYMRRQPPLKLQGGVDKVRFE 495
           C +D GD    R  A   A+PG+          + TRR  + RR+PP   + G      +
Sbjct: 138 CDADGGDGGVERRRAST-ANPGDMLLRRRLQILATTRRRCWQRRRPPPPSRCGKSYRSSQ 196

Query: 496 SNLGDSHEHGGSEPSPLR 549
               DS  H     SP R
Sbjct: 197 GRRRDSRAHSPGRRSPSR 214


>03_05_0545 + 25419031-25420758
          Length = 575

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 8/55 (14%)
 Frame = +1

Query: 349 GDADTNRGGARIPASPGEPH--C------DSGTRRALYMRRQPPLKLQGGVDKVR 489
           G A  +R G+   +S GE    C      + G  R LY+R  PP    G VD +R
Sbjct: 49  GSASRSRSGSSSSSSAGEEQGSCQELQSIEGGEARCLYLRTHPPCAPAGYVDYLR 103


>02_05_0718 + 31203358-31203717,31203826-31204011
          Length = 181

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 17/58 (29%), Positives = 22/58 (37%)
 Frame = +1

Query: 349 GDADTNRGGARIPASPGEPHCDSGTRRALYMRRQPPLKLQGGVDKVRFESNLGDSHEH 522
           GD D   G  R P        D G R+  Y +R        G  K R+E N    H++
Sbjct: 122 GDDDDGSGDERKPRYKKHDDDDDGERKPRYKKRDDDDDDSDGERKQRYEKNNRRRHDY 179


>08_01_0540 +
           4691929-4692014,4692915-4693125,4693756-4693885,
           4695422-4696072,4696179-4696395,4697040-4697111,
           4697167-4697257,4697367-4698363,4698914-4699044,
           4699584-4699802,4700110-4700805,4700912-4701121,
           4701606-4701710
          Length = 1271

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 16/54 (29%), Positives = 20/54 (37%)
 Frame = +3

Query: 483 SQIRKQSWRFTRTWWL*TLASPSRTITTIRGSCASATCSRTIPVHTCVKSTPIQ 644
           S I   S    R  W   +   ++TI   R   A A C        C+  TPIQ
Sbjct: 709 SDIYLASGPVARVRWFRVVLDEAQTIKNFRTQVAKACCGLRAKRRWCLSGTPIQ 762


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,274,079
Number of Sequences: 37544
Number of extensions: 529359
Number of successful extensions: 1393
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1349
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1392
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2138915688
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)