Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_K11
         (836 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        23   2.6  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        23   2.6  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        23   2.6  
DQ494419-1|ABF55370.1|  127|Apis mellifera telomerase reverse tr...    23   3.5  
DQ494418-1|ABF55369.1|  110|Apis mellifera telomerase reverse tr...    23   3.5  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    23   4.6  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          22   6.1  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      22   6.1  
AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phospha...    22   6.1  
AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropi...    22   8.1  
AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc fi...    22   8.1  

>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.4 bits (48), Expect = 2.6
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +3

Query: 177 ALRCLEEHANKIKWKKI 227
           ALRCL  +  +I W K+
Sbjct: 240 ALRCLAHNGGEIAWTKV 256


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.4 bits (48), Expect = 2.6
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +3

Query: 177 ALRCLEEHANKIKWKKI 227
           ALRCL  +  +I W K+
Sbjct: 240 ALRCLAHNGGEIAWTKV 256


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.4 bits (48), Expect = 2.6
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +3

Query: 177 ALRCLEEHANKIKWKKI 227
           ALRCL  +  +I W K+
Sbjct: 240 ALRCLAHNGGEIAWTKV 256


>DQ494419-1|ABF55370.1|  127|Apis mellifera telomerase reverse
           transcriptase protein.
          Length = 127

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 13/41 (31%), Positives = 20/41 (48%)
 Frame = -1

Query: 284 FQNISNTTVSATQIYDSITDFFPLNLIRMFLEAAQSISLLE 162
           F N+ N   +  +I  S  +     +IRMFL + Q  S L+
Sbjct: 52  FDNVHNHIQNIFKIIKSTNEKITRYIIRMFLISQQKTSKLK 92


>DQ494418-1|ABF55369.1|  110|Apis mellifera telomerase reverse
           transcriptase protein.
          Length = 110

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 13/41 (31%), Positives = 20/41 (48%)
 Frame = -1

Query: 284 FQNISNTTVSATQIYDSITDFFPLNLIRMFLEAAQSISLLE 162
           F N+ N   +  +I  S  +     +IRMFL + Q  S L+
Sbjct: 35  FDNVHNHIQNIFKIIKSTNEKITRYIIRMFLISQQKTSKLK 75


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
            protein.
          Length = 1143

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 15/48 (31%), Positives = 23/48 (47%)
 Frame = +3

Query: 501  IFNLLGDEGDCLLLFLGHTPIFDVYRTLSHTEKWHSWLEHVDRFISPY 644
            I+++L  EG    +    T   DVY+TL H  + H   E  D+ +  Y
Sbjct: 1058 IYDMLVYEGGHFYVCGDCTMAEDVYQTLKHIIQTHG--EMTDKQVEAY 1103


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +3

Query: 303 YGRLVGCDISEEMVKYANKHHGF 371
           Y RLV  +   E  KY+++ +GF
Sbjct: 576 YNRLVVSEDGSETFKYSSQPYGF 598


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +3

Query: 303 YGRLVGCDISEEMVKYANKHHGF 371
           Y RLV  +   E  KY+++ +GF
Sbjct: 576 YNRLVVSEDGSETFKYSSQPYGF 598


>AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phosphate
           dehydrogenase protein.
          Length = 363

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +3

Query: 246 LGCADGSVTDILKVYMPKNYGRLV 317
           +GC D ++  ILK  M  +Y ++V
Sbjct: 168 IGCKDKNMAPILKDLMETSYFKVV 191


>AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropin
           releasing hormone-binding protein protein.
          Length = 332

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +3

Query: 270 TDILKVYMPKNYGRLVGC 323
           T + + Y  +NYGR + C
Sbjct: 200 TSLTEPYTLRNYGRRINC 217


>AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc
          finger domain-Z3 isoform protein.
          Length = 92

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = +1

Query: 13 RRYRSENSDTSH 48
          RRYR++NS T+H
Sbjct: 43 RRYRTKNSLTTH 54


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 243,439
Number of Sequences: 438
Number of extensions: 5903
Number of successful extensions: 25
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26824317
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)