Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_K09
         (708 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_04_0116 + 19901546-19901737,19901825-19901899,19902034-199021...    33   0.29 
07_03_0533 - 19178296-19178516,19178790-19178847,19179315-191793...    30   1.6  
02_05_1091 + 34044999-34045082,34046848-34047048,34047312-340475...    29   3.6  
02_01_0224 - 1461924-1462227,1462602-1462798,1463059-1463213,146...    29   4.8  
04_04_0866 + 28859512-28859961                                         28   6.3  
10_01_0132 - 1601421-1601657,1601761-1601922,1602812-1603721,160...    28   8.4  
03_05_0172 - 21488504-21488752,21488862-21489611,21489691-214897...    28   8.4  

>02_04_0116 +
           19901546-19901737,19901825-19901899,19902034-19902115,
           19902219-19902298,19903279-19903482,19903625-19903750,
           19903872-19903985,19904802-19904918
          Length = 329

 Score = 32.7 bits (71), Expect = 0.29
 Identities = 22/80 (27%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
 Frame = -3

Query: 514 LSVNSHFGNGLSSFLRA--NIYLGNVLVRECFNLPMIFIAHSWKGQITSYNRQRRINLIL 341
           +S++S +    +S+  A  +  +   L+++ F+   IFI     G I  Y+++  +NL+L
Sbjct: 138 VSIDSVWSRAFTSYFIALYSYDMSIPLIQKTFHFCSIFITIQLWGHI--YHKRHLLNLML 195

Query: 340 LHHRSVYFIFDPL*DLFGHL 281
           +H+   Y   D L   F HL
Sbjct: 196 IHYSKYYGQSDTLKTTFSHL 215


>07_03_0533 -
           19178296-19178516,19178790-19178847,19179315-19179370,
           19179527-19179646,19180446-19180599,19180911-19181018,
           19181134-19181197,19181342-19181518,19181679-19181824,
           19181912-19181941,19181999-19182150,19182266-19182347
          Length = 455

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +2

Query: 398 MCNEDHRKIKTLANKHVAKIYVCTEEARKSIA 493
           +C +DHRKI    N H  ++Y    + R  I+
Sbjct: 237 LCKDDHRKIVACTNNHQVRLYDTASQRRPVIS 268


>02_05_1091 +
           34044999-34045082,34046848-34047048,34047312-34047523,
           34047846-34048413
          Length = 354

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 13/44 (29%), Positives = 21/44 (47%)
 Frame = +2

Query: 575 IDKVRQRILQRKDINACLKQLSREAVLLGYELDLXLTNARRHNE 706
           +D  R+R+ +  D+  C KQ+  EA+  G   +L       H E
Sbjct: 279 VDFTRKRLQEHNDLRLCCKQIVEEAIRRGASDNLTAVMVSFHQE 322


>02_01_0224 -
           1461924-1462227,1462602-1462798,1463059-1463213,
           1464101-1464207,1464289-1464375,1465332-1465414,
           1465959-1466027,1466332-1466658,1466744-1466957,
           1467170-1467267,1467516-1467554,1467672-1468160
          Length = 722

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 22/95 (23%), Positives = 44/95 (46%)
 Frame = +2

Query: 122 LKKLKQRWGNSVTSDHKRRSQLALVNSEISRYMDTVIAPFLDTYHRNIQISYQQMTEKIL 301
           L  + Q   N+ T  ++R S+  +    +S  +  +IA   D      +  +  + EK+ 
Sbjct: 423 LHSVLQHLLNNRTMSNQRHSEENIRVDALSIMI--IIARTSDPKVEREKFGFTSVMEKLH 480

Query: 302 KRIKDEINAAVVKKNKIYTALTIIACNLTLPAMCN 406
           + ++ E N  +VKK+ +     ++ C  TL  +CN
Sbjct: 481 QLLQKE-NGLLVKKHSVDLLFLLLNCPTTLKLLCN 514


>04_04_0866 + 28859512-28859961
          Length = 149

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +1

Query: 469 GGSSKVHCQNGNLRSRNDQYH*EAHGGKFGG 561
           G ++ + C+ G  R R   +  E HGG  GG
Sbjct: 95  GAAATLLCRGGGSRGRRHPHRWETHGGSSGG 125


>10_01_0132 -
           1601421-1601657,1601761-1601922,1602812-1603721,
           1604587-1604651,1604704-1604746,1605086-1605128,
           1605874-1605955,1606270-1606464,1606567-1606721,
           1611207-1611435,1611538-1611693,1612539-1613476,
           1614946-1614967
          Length = 1078

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 19/55 (34%), Positives = 28/55 (50%)
 Frame = +3

Query: 531 LRSTWREVWWRLPNSLTRLDSAFCKEKTSMRASSNYRERRFCWAMNWILX*RTPV 695
           L   WR++W     SLTR+++ FC+ K   R      + RF   +N +L  R PV
Sbjct: 707 LSRRWRDLW----RSLTRINADFCEFKGDTRTWVG-DKARFEKFLNALLLRRDPV 756


>03_05_0172 -
           21488504-21488752,21488862-21489611,21489691-21489789,
           21489862-21490776,21490847-21490976,21491438-21491583,
           21491801-21491896,21492521-21492613,21492702-21492755,
           21492897-21492956,21493046-21493171,21493283-21493366,
           21493444-21493587,21493667-21493963
          Length = 1080

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
 Frame = +2

Query: 356 TALTIIACNLT-LPAMCNEDHRKIKTLANKHVAKIYVCTEEARKS 487
           TA TI +   T L A+C E   KIK L+N  V +   C+E+A+ S
Sbjct: 719 TASTIASKRQTELEALCEEQADKIKELSNL-VDQYKKCSEDAQNS 762


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,779,675
Number of Sequences: 37544
Number of extensions: 375157
Number of successful extensions: 1105
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1077
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1105
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1827423340
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)