Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_K09
         (708 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein hom...    25   2.3  
AJ973471-1|CAJ01518.1|  122|Anopheles gambiae hypothetical prote...    25   3.1  
AJ697731-1|CAG26924.1|  122|Anopheles gambiae putative chemosens...    25   3.1  
AJ697730-1|CAG26923.1|  122|Anopheles gambiae putative chemosens...    25   3.1  
AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform ...    24   5.4  
AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    24   5.4  
AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic acetylch...    24   5.4  
AJ237706-1|CAB40347.1|  570|Anopheles gambiae putative 5'-nucleo...    23   7.1  
AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform ...    23   9.4  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    23   9.4  

>AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein
           homolog protein.
          Length = 394

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
 Frame = +1

Query: 472 GSSKVHC-QNGNLRSRNDQYH*EAHGGKFGGG 564
           GS  +H  QN NL   +  +H   +GG  GGG
Sbjct: 109 GSGALHLGQNPNLHHHHHHHHHGNNGGGNGGG 140


>AJ973471-1|CAJ01518.1|  122|Anopheles gambiae hypothetical protein
           protein.
          Length = 122

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 11/39 (28%), Positives = 21/39 (53%)
 Frame = +2

Query: 401 CNEDHRKIKTLANKHVAKIYVCTEEARKSIAKMGIYAQE 517
           C ++ R++KTL +        C+E+ R S  K+  + +E
Sbjct: 54  CTQEGRELKTLPDALKTNCEKCSEKQRTSSRKVIAHLEE 92


>AJ697731-1|CAG26924.1|  122|Anopheles gambiae putative chemosensory
           protein CSP2 protein.
          Length = 122

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 11/39 (28%), Positives = 21/39 (53%)
 Frame = +2

Query: 401 CNEDHRKIKTLANKHVAKIYVCTEEARKSIAKMGIYAQE 517
           C ++ R++KTL +        C+E+ R S  K+  + +E
Sbjct: 54  CTQEGRELKTLPDALKTNCEKCSEKQRTSSRKVIAHLEE 92


>AJ697730-1|CAG26923.1|  122|Anopheles gambiae putative chemosensory
           protein CSP1 protein.
          Length = 122

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 11/39 (28%), Positives = 21/39 (53%)
 Frame = +2

Query: 401 CNEDHRKIKTLANKHVAKIYVCTEEARKSIAKMGIYAQE 517
           C ++ R++KTL +        C+E+ R S  K+  + +E
Sbjct: 54  CTQEGRELKTLPDALKTNCEKCSEKQRTSSRKVIAHLEE 92


>AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform A
           protein.
          Length = 753

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -2

Query: 68  DRRPDGCGCSCNXSHDV 18
           D RP  CG +C  +H V
Sbjct: 598 DNRPADCGANCMCTHKV 614


>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = +1

Query: 547 GKFGGGCQIH 576
           G FGG CQIH
Sbjct: 415 GPFGGSCQIH 424


>AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = +1

Query: 547 GKFGGGCQIH 576
           G FGG CQIH
Sbjct: 415 GPFGGSCQIH 424


>AJ237706-1|CAB40347.1|  570|Anopheles gambiae putative
           5'-nucleotidase protein.
          Length = 570

 Score = 23.4 bits (48), Expect = 7.1
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +2

Query: 35  YRSNHIRQDGGLCFELAPWQ 94
           Y +N ++QD  +  EL PW+
Sbjct: 324 YMNNSVKQDEEVLRELEPWR 343


>AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform B
           protein.
          Length = 755

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -2

Query: 68  DRRPDGCGCSCNXSHDV 18
           D RP  CG +C  +H V
Sbjct: 598 DNRPPDCGPNCMCTHKV 614


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 14/48 (29%), Positives = 22/48 (45%)
 Frame = +2

Query: 149 NSVTSDHKRRSQLALVNSEISRYMDTVIAPFLDTYHRNIQISYQQMTE 292
           N     HKR +    V   + +YM+ +I     T  R IQI  ++M +
Sbjct: 530 NMCQPTHKRYN--VAVTKVLGKYMEAIIVDTEKTARRCIQILKEKMLD 575


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 710,161
Number of Sequences: 2352
Number of extensions: 13524
Number of successful extensions: 28
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72340815
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)