Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_K09
         (708 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF427496-1|AAL25120.1|  734|Drosophila melanogaster occludin-lik...    36   0.041
AY069032-1|AAL39177.1|  852|Drosophila melanogaster GH01474p pro...    30   3.5  
AE014298-3115|AAN09674.1|  852|Drosophila melanogaster CG1486-PB...    30   3.5  
AE014298-3114|AAF50832.1|  852|Drosophila melanogaster CG1486-PA...    30   3.5  

>AF427496-1|AAL25120.1|  734|Drosophila melanogaster occludin-like
           protein protein.
          Length = 734

 Score = 36.3 bits (80), Expect = 0.041
 Identities = 32/178 (17%), Positives = 80/178 (44%), Gaps = 1/178 (0%)
 Frame = +2

Query: 107 ELEEHLKKLKQRWGNSVTSDHKRRSQLALVNSEISRYMDTVIAPFLDTYHRNIQISYQQM 286
           +L   LKK  +   N+ T  +K   ++ ++NSEI R  + + +   D  + N +    + 
Sbjct: 162 QLTSRLKKSIEDQNNATTRMYKLNRKVMMLNSEILRLKNNINSLEKDVLNANGRTDDIRR 221

Query: 287 TEKILKRIKDEINAAVVKKNKIYTALT-IIACNLTLPAMCNEDHRKIKTLANKHVAKIYV 463
            ++ L+R +D + + ++K N     L   +     + +  N D  K+    N  + + Y+
Sbjct: 222 IKETLQRERDSLRSDIIKLNNTMADLKHDMMLKANMISSLNLDMNKL----NVKLDEAYI 277

Query: 464 CTEEARKSIAKMGIYAQEMINITKKHMEGSLVEAAKFIDKVRQRILQRKDINACLKQL 637
              +A K   +M    + +    + + +   ++ ++  D   +   +++++++  KQL
Sbjct: 278 LKSKAEKERDEMAQEMETLHERIENYQDQISLKTSQVNDLTEKLHEKQREVHSYKKQL 335


>AY069032-1|AAL39177.1|  852|Drosophila melanogaster GH01474p
           protein.
          Length = 852

 Score = 29.9 bits (64), Expect = 3.5
 Identities = 15/40 (37%), Positives = 18/40 (45%)
 Frame = -3

Query: 490 NGLSSFLRANIYLGNVLVRECFNLPMIFIAHSWKGQITSY 371
           N  S F R N +LG +L R+C N     I H   G    Y
Sbjct: 480 NNASYFDRLNSWLGQILQRDCPNFDFEVIEHPTHGSCIRY 519


>AE014298-3115|AAN09674.1|  852|Drosophila melanogaster CG1486-PB,
           isoform B protein.
          Length = 852

 Score = 29.9 bits (64), Expect = 3.5
 Identities = 15/40 (37%), Positives = 18/40 (45%)
 Frame = -3

Query: 490 NGLSSFLRANIYLGNVLVRECFNLPMIFIAHSWKGQITSY 371
           N  S F R N +LG +L R+C N     I H   G    Y
Sbjct: 480 NNASYFDRLNSWLGQILQRDCPNFDFEVIEHPTHGSCIRY 519


>AE014298-3114|AAF50832.1|  852|Drosophila melanogaster CG1486-PA,
           isoform A protein.
          Length = 852

 Score = 29.9 bits (64), Expect = 3.5
 Identities = 15/40 (37%), Positives = 18/40 (45%)
 Frame = -3

Query: 490 NGLSSFLRANIYLGNVLVRECFNLPMIFIAHSWKGQITSY 371
           N  S F R N +LG +L R+C N     I H   G    Y
Sbjct: 480 NNASYFDRLNSWLGQILQRDCPNFDFEVIEHPTHGSCIRY 519


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,814,083
Number of Sequences: 53049
Number of extensions: 624913
Number of successful extensions: 1913
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1845
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1913
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3128965752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)