Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_K09
         (708 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF036705-2|AAM98021.1|  237|Caenorhabditis elegans Hypothetical ...    38   0.007
AF036705-1|AAB95170.1|  249|Caenorhabditis elegans Hypothetical ...    38   0.007
U97017-1|AAB52363.1| 2643|Caenorhabditis elegans Temporarily ass...    32   0.46 
AF125964-9|AAD14749.2|  523|Caenorhabditis elegans Glutamate tra...    30   1.4  
Z46792-4|CAA86767.2| 1531|Caenorhabditis elegans Hypothetical pr...    30   1.9  
Z46791-8|CAA86762.2| 1531|Caenorhabditis elegans Hypothetical pr...    30   1.9  
U41104-5|AAK18976.3| 1564|Caenorhabditis elegans Twik family of ...    28   5.7  
U47144-5|AAB52621.2| 1410|Caenorhabditis elegans Hypothetical pr...    28   7.5  
AF067218-1|AAC17021.1| 1451|Caenorhabditis elegans Hypothetical ...    28   7.5  
Z19158-4|CAJ76964.1|  719|Caenorhabditis elegans Hypothetical pr...    27   9.9  

>AF036705-2|AAM98021.1|  237|Caenorhabditis elegans Hypothetical
           protein F37C4.4b protein.
          Length = 237

 Score = 37.9 bits (84), Expect = 0.007
 Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
 Frame = -3

Query: 526 IDHF--LSVNSHFGNGLSSFLRANIYLGNVLVRECFNLPMIFIAHSWKGQITSYNRQRRI 353
           +DH+  + V +  GNGLS F+     L +V +  CF L  + I H W    T Y   ++I
Sbjct: 145 LDHYSKMKVRTAIGNGLSGFM----LLASVALGVCFILTAVMICHYWNSNTTGYQPVQKI 200


>AF036705-1|AAB95170.1|  249|Caenorhabditis elegans Hypothetical
           protein F37C4.4a protein.
          Length = 249

 Score = 37.9 bits (84), Expect = 0.007
 Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
 Frame = -3

Query: 526 IDHF--LSVNSHFGNGLSSFLRANIYLGNVLVRECFNLPMIFIAHSWKGQITSYNRQRRI 353
           +DH+  + V +  GNGLS F+     L +V +  CF L  + I H W    T Y   ++I
Sbjct: 157 LDHYSKMKVRTAIGNGLSGFM----LLASVALGVCFILTAVMICHYWNSNTTGYQPVQKI 212


>U97017-1|AAB52363.1| 2643|Caenorhabditis elegans Temporarily assigned
            gene nameprotein 162 protein.
          Length = 2643

 Score = 31.9 bits (69), Expect = 0.46
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +1

Query: 427  NTREQARCQDICLHGGSSKVHCQNGNLRSRND 522
            N+ +  +C  ICL+ G +K  CQ  NL+S  D
Sbjct: 1626 NSCDGFKCNGICLNNGKNKATCQCTNLQSTTD 1657


>AF125964-9|AAD14749.2|  523|Caenorhabditis elegans Glutamate
           transporter family protein7 protein.
          Length = 523

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 30/130 (23%), Positives = 59/130 (45%), Gaps = 7/130 (5%)
 Frame = -3

Query: 610 FSLQNALSNLVNEFGSLHQTSLHVLLSDIDHFLSVNSHFG------NGLSSFLRANIYLG 449
           F L +   NLV   G +    L +++  +  F S+ S  G      +G  SF+    YL 
Sbjct: 32  FDLSDNARNLVGFPGEIFMQVLKLMVLPLI-FSSLISSLGQMDASRSGKMSFIAIAYYLT 90

Query: 448 NVLVRECFNLPMIFIAHSWKGQITSYNRQRRINLILLHHRSVYFIFDPL*DLFGHLLVRD 269
            V++  C  + M+F+ H     + S+   R  ++++    ++  + D + DL  ++  ++
Sbjct: 91  TVIIASCIGVAMVFLFHPGDPDMRSH---RPEDVVIREDNNISAL-DSILDLIRNMFPQN 146

Query: 268 L-NVTMVRVQ 242
           +   TM R Q
Sbjct: 147 IVEATMYRSQ 156


>Z46792-4|CAA86767.2| 1531|Caenorhabditis elegans Hypothetical
           protein C09G5.8 protein.
          Length = 1531

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 30/132 (22%), Positives = 59/132 (44%), Gaps = 3/132 (2%)
 Frame = +2

Query: 311 KDEINAAVVKKNK-IYTALTIIACNLTLPAMCNEDHRKIKTLANKHVAKIYVCTEEARKS 487
           + EI A + + N+     +  I  N TLPA C  +  +  T ++  V+  Y   + +R  
Sbjct: 139 RSEITARMFENNREAMFKMLKIRWN-TLPASCKYNQLRRDTSSSDRVSARYPIEKWSRPQ 197

Query: 488 IAKMGIYAQEMINITKKHMEGSLVEAAKFIDKVRQRILQRKDINACLKQLSR--EAVLLG 661
           +        E +N  +K ++    +   F  + R+ +L+RK  N  + + S+  + V   
Sbjct: 198 LEDHFHNVVEELNKAQKKVKEQEKQITTFNSRFRRSMLERKSQNEKVVERSKYDDVVKEN 257

Query: 662 YELDLXLTNARR 697
             LD+ L  A++
Sbjct: 258 QILDMKLKAAKQ 269


>Z46791-8|CAA86762.2| 1531|Caenorhabditis elegans Hypothetical
           protein C09G5.8 protein.
          Length = 1531

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 30/132 (22%), Positives = 59/132 (44%), Gaps = 3/132 (2%)
 Frame = +2

Query: 311 KDEINAAVVKKNK-IYTALTIIACNLTLPAMCNEDHRKIKTLANKHVAKIYVCTEEARKS 487
           + EI A + + N+     +  I  N TLPA C  +  +  T ++  V+  Y   + +R  
Sbjct: 139 RSEITARMFENNREAMFKMLKIRWN-TLPASCKYNQLRRDTSSSDRVSARYPIEKWSRPQ 197

Query: 488 IAKMGIYAQEMINITKKHMEGSLVEAAKFIDKVRQRILQRKDINACLKQLSR--EAVLLG 661
           +        E +N  +K ++    +   F  + R+ +L+RK  N  + + S+  + V   
Sbjct: 198 LEDHFHNVVEELNKAQKKVKEQEKQITTFNSRFRRSMLERKSQNEKVVERSKYDDVVKEN 257

Query: 662 YELDLXLTNARR 697
             LD+ L  A++
Sbjct: 258 QILDMKLKAAKQ 269


>U41104-5|AAK18976.3| 1564|Caenorhabditis elegans Twik family of
            potassium channelsprotein 2 protein.
          Length = 1564

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 12/61 (19%), Positives = 25/61 (40%)
 Frame = +2

Query: 338  KKNKIYTALTIIACNLTLPAMCNEDHRKIKTLANKHVAKIYVCTEEARKSIAKMGIYAQE 517
            K   ++    ++AC   +P MC +    ++ +  K    +  C +  +K   K     Q+
Sbjct: 1239 KNYHLHKTARMLACANNVPKMCKKCAENVQKMCKKCAKNVQKCAKNVQKMCKKCAKNVQK 1298

Query: 518  M 520
            M
Sbjct: 1299 M 1299


>U47144-5|AAB52621.2| 1410|Caenorhabditis elegans Hypothetical protein
            ZC53.4 protein.
          Length = 1410

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 19/60 (31%), Positives = 30/60 (50%)
 Frame = +2

Query: 494  KMGIYAQEMINITKKHMEGSLVEAAKFIDKVRQRILQRKDINACLKQLSREAVLLGYELD 673
            K G+Y  E ++  K+  +  L    KF DK+  +  +RK I A + +  R   L  Y+LD
Sbjct: 1077 KKGVYPYEYMDSFKRFDKTKLPNRDKFYDKLNNKKCKRKGI-ADVFENFRALSLRVYQLD 1135


>AF067218-1|AAC17021.1| 1451|Caenorhabditis elegans Hypothetical
           protein K10E9.1 protein.
          Length = 1451

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = +2

Query: 596 ILQRKDINACLKQLSREAVLLGYELDLXLTNARRHN 703
           I++++ ++ C++ +S    L GY LD     A  HN
Sbjct: 530 IIEKRTLSTCIRNVSEGKELSGYTLDPYTVAANVHN 565


>Z19158-4|CAJ76964.1|  719|Caenorhabditis elegans Hypothetical
           protein T23G5.2a protein.
          Length = 719

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = +3

Query: 447 LPRYMFARRKLESPLPKWEFTLKK*SISLRSTWR 548
           L R   A RKL +P+  W   +    +S+R  WR
Sbjct: 375 LQRAAEATRKLGTPISSWSLVVDLDGLSMRHLWR 408


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,571,371
Number of Sequences: 27780
Number of extensions: 309324
Number of successful extensions: 971
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 929
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 971
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)