Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_F_K05
(476 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q0ZD84 Cluster: Ribosomal protein S26; n=9; Coelomata|R... 150 1e-35
UniRef50_Q5JNZ5 Cluster: 40S ribosomal protein S26-like 1; n=110... 136 2e-31
UniRef50_P39938 Cluster: 40S ribosomal protein S26-A; n=68; Euka... 129 3e-29
UniRef50_Q8LPJ7 Cluster: 40S ribosomal protein S26-2; n=4; Eukar... 129 4e-29
UniRef50_Q5MGL0 Cluster: Ribosomal protein S26e; n=1; Lonomia ob... 127 1e-28
UniRef50_UPI000049A1F9 Cluster: 40S ribosomal protein S26; n=4; ... 120 2e-26
UniRef50_UPI0000E1F674 Cluster: PREDICTED: similar to 40S riboso... 110 1e-23
UniRef50_UPI00001CB188 Cluster: UPI00001CB188 related cluster; n... 106 3e-22
UniRef50_Q01E61 Cluster: Ribosomal protein S26, cytosolic; n=2; ... 103 2e-21
UniRef50_A2DST7 Cluster: 40S ribosomal protein S26, putative; n=... 100 1e-20
UniRef50_Q23PT4 Cluster: Ribosomal protein S26e containing prote... 98 1e-19
UniRef50_Q9BHU1 Cluster: 40S ribosomal protein S26; n=1; Sterkie... 97 1e-19
UniRef50_Q4Q6X0 Cluster: Ribosomal protein s26, putative; n=6; T... 89 5e-17
UniRef50_Q8SRN2 Cluster: 40S RIBOSOMAL PROTEIN S26; n=2; Apanspo... 83 3e-15
UniRef50_UPI00005A1FB7 Cluster: PREDICTED: similar to 40S riboso... 82 7e-15
UniRef50_Q9AW37 Cluster: 40S ribosomal protein S26; n=1; Guillar... 81 1e-14
UniRef50_UPI0000DA2056 Cluster: PREDICTED: similar to Ankyrin re... 65 7e-10
UniRef50_Q3LVZ2 Cluster: Ribosomal protein S26; n=1; Bigelowiell... 58 1e-07
UniRef50_UPI0000DC1C52 Cluster: UPI0000DC1C52 related cluster; n... 49 6e-05
UniRef50_Q6CS02 Cluster: Similarity; n=1; Kluyveromyces lactis|R... 48 8e-05
UniRef50_A3H8X5 Cluster: Ribosomal protein S26E; n=2; Thermoprot... 47 2e-04
UniRef50_Q05DX2 Cluster: 30S ribosomal protein S26e; n=5; Crenar... 41 0.016
UniRef50_Q8ZVQ6 Cluster: Ribosomal protein S26; n=10; Thermoprot... 39 0.050
UniRef50_UPI0000499B8D Cluster: hypothetical protein 53.t00011; ... 32 5.7
UniRef50_A7P6R9 Cluster: Chromosome chr9 scaffold_7, whole genom... 32 5.7
UniRef50_Q7RHF5 Cluster: Putative uncharacterized protein PY0403... 31 10.0
UniRef50_Q74N49 Cluster: NEQ043; n=1; Nanoarchaeum equitans|Rep:... 31 10.0
>UniRef50_Q0ZD84 Cluster: Ribosomal protein S26; n=9; Coelomata|Rep:
Ribosomal protein S26 - Pectinaria gouldii (Trumpet
worm) (Ice-cream cone worm)
Length = 109
Score = 150 bits (364), Expect = 1e-35
Identities = 70/93 (75%), Positives = 78/93 (83%)
Frame = +1
Query: 85 HVKAVXCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVS 264
H + V CTNCARCVPKDKAIKKFVIRNIVEAAAVRDI++ASVY + LPKLYAKLHYCVS
Sbjct: 17 HTRPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVYEGYPLPKLYAKLHYCVS 76
Query: 265 CAIHSKVVRNRSKKDRRIRTPPKSNFPRDMSRP 363
CAIHSKVVRNRS++ R+ RTPP P M +P
Sbjct: 77 CAIHSKVVRNRSREARKDRTPPPRFKPGAMRKP 109
>UniRef50_Q5JNZ5 Cluster: 40S ribosomal protein S26-like 1; n=110;
Fungi/Metazoa group|Rep: 40S ribosomal protein S26-like
1 - Homo sapiens (Human)
Length = 115
Score = 136 bits (329), Expect = 2e-31
Identities = 61/82 (74%), Positives = 70/82 (85%)
Frame = +1
Query: 85 HVKAVXCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVS 264
HV+ + CTNC RCVP DKAIKKFVIRNIVEAAAVRDI++ SV+ + LPKLY KLHYCVS
Sbjct: 17 HVQPIRCTNCVRCVPTDKAIKKFVIRNIVEAAAVRDISEVSVFDAYVLPKLYVKLHYCVS 76
Query: 265 CAIHSKVVRNRSKKDRRIRTPP 330
CAIHSKVVRNRS++ + RTPP
Sbjct: 77 CAIHSKVVRNRSREACKDRTPP 98
>UniRef50_P39938 Cluster: 40S ribosomal protein S26-A; n=68;
Eukaryota|Rep: 40S ribosomal protein S26-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 119
Score = 129 bits (312), Expect = 3e-29
Identities = 55/83 (66%), Positives = 70/83 (84%)
Frame = +1
Query: 85 HVKAVXCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVS 264
HVK V C NC++ +PKDKAIK+ IRNIVEAAAVRD+++ASVYP + LPK Y KLHYCVS
Sbjct: 17 HVKPVRCVNCSKSIPKDKAIKRMAIRNIVEAAAVRDLSEASVYPEYALPKTYNKLHYCVS 76
Query: 265 CAIHSKVVRNRSKKDRRIRTPPK 333
CAIH+++VR RS++DR+ R PP+
Sbjct: 77 CAIHARIVRVRSREDRKNRAPPQ 99
>UniRef50_Q8LPJ7 Cluster: 40S ribosomal protein S26-2; n=4;
Eukaryota|Rep: 40S ribosomal protein S26-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 133
Score = 129 bits (311), Expect = 4e-29
Identities = 57/97 (58%), Positives = 71/97 (73%)
Frame = +1
Query: 85 HVKAVXCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVS 264
HV + C+NC +C PKDKAIK+F++RNIVE AA+RD+ +ASVY + LPKLYAK YCVS
Sbjct: 17 HVNPIRCSNCGKCCPKDKAIKRFIVRNIVEQAAIRDVQEASVYEGYTLPKLYAKTQYCVS 76
Query: 265 CAIHSKVVRNRSKKDRRIRTPPKSNFPRDMSRPQAVQ 375
CAIHS VVR RS+ +RR+RTPP R P+ Q
Sbjct: 77 CAIHSHVVRVRSRTNRRVRTPPPRFARRKEDTPKPGQ 113
>UniRef50_Q5MGL0 Cluster: Ribosomal protein S26e; n=1; Lonomia
obliqua|Rep: Ribosomal protein S26e - Lonomia obliqua
(Moth)
Length = 82
Score = 127 bits (306), Expect = 1e-28
Identities = 57/71 (80%), Positives = 64/71 (90%)
Frame = +1
Query: 166 IVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKSNFP 345
+++ +RDIN+ASVY FQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPK+ FP
Sbjct: 11 LLKLLPLRDINEASVYTSFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKNTFP 70
Query: 346 RDMSRPQAVQR 378
RDM+RPQ VQR
Sbjct: 71 RDMARPQNVQR 81
>UniRef50_UPI000049A1F9 Cluster: 40S ribosomal protein S26; n=4;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S26 - Entamoeba histolytica HM-1:IMSS
Length = 147
Score = 120 bits (288), Expect = 2e-26
Identities = 56/97 (57%), Positives = 71/97 (73%)
Frame = +1
Query: 85 HVKAVXCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVS 264
H + V C++C RCVPKDKAIK++ I+NIVEAAAVRDI+D S ++LPK Y KL YCVS
Sbjct: 17 HTQNVRCSHCGRCVPKDKAIKRYQIKNIVEAAAVRDISDNSALTKYKLPKTYMKLEYCVS 76
Query: 265 CAIHSKVVRNRSKKDRRIRTPPKSNFPRDMSRPQAVQ 375
C IH +VVR RS+ DRR R PPK + ++ QAV+
Sbjct: 77 CGIHGRVVRVRSRTDRRNRLPPK-RVVKKTNKQQAVK 112
>UniRef50_UPI0000E1F674 Cluster: PREDICTED: similar to 40S ribosomal
protein S26-2, partial; n=4; Pan troglodytes|Rep:
PREDICTED: similar to 40S ribosomal protein S26-2,
partial - Pan troglodytes
Length = 196
Score = 110 bits (265), Expect = 1e-23
Identities = 55/96 (57%), Positives = 69/96 (71%), Gaps = 2/96 (2%)
Frame = +1
Query: 85 HVKAVXCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPK--LYAKLHYC 258
H++ + CTN A+ VPKDKAIKKF+IRN+VEAAAVRDI++ASV+ + LPK LY KL+YC
Sbjct: 12 HMQRIRCTNYAQRVPKDKAIKKFIIRNVVEAAAVRDISEASVFNAYVLPKLYLYVKLNYC 71
Query: 259 VSCAIHSKVVRNRSKKDRRIRTPPKSNFPRDMSRPQ 366
V CAIH KVVRN K + +T P P + PQ
Sbjct: 72 VRCAIHGKVVRNPPCKAHKDQTHPPRFRPSRSAAPQ 107
>UniRef50_UPI00001CB188 Cluster: UPI00001CB188 related cluster; n=2;
Rattus norvegicus|Rep: UPI00001CB188 UniRef100 entry -
Rattus norvegicus
Length = 107
Score = 106 bits (254), Expect = 3e-22
Identities = 51/81 (62%), Positives = 62/81 (76%)
Frame = +1
Query: 85 HVKAVXCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVS 264
HV+ V C + A C+PKDKAIK F+I+NI+EAAAVRDI+ A+V+ + LP LY KLHYCVS
Sbjct: 18 HVQPVPCRSSAWCLPKDKAIK-FIIQNILEAAAVRDIDKANVFKAYMLPMLYVKLHYCVS 76
Query: 265 CAIHSKVVRNRSKKDRRIRTP 327
CAIHS+VVRN K RR P
Sbjct: 77 CAIHSEVVRNHLLKLRRTEHP 97
>UniRef50_Q01E61 Cluster: Ribosomal protein S26, cytosolic; n=2;
Ostreococcus|Rep: Ribosomal protein S26, cytosolic -
Ostreococcus tauri
Length = 221
Score = 103 bits (248), Expect = 2e-21
Identities = 45/82 (54%), Positives = 63/82 (76%)
Frame = +1
Query: 88 VKAVXCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSC 267
VK V C + VPKDKA+++F++RNIVE+AA+RD+ ++ + + LPKLY K++Y +S
Sbjct: 127 VKRVFCESSGALVPKDKAVRRFMVRNIVESAAIRDLQESCAFESYTLPKLYRKVYYSISA 186
Query: 268 AIHSKVVRNRSKKDRRIRTPPK 333
AIHSKVVR RS++ RRIR PPK
Sbjct: 187 AIHSKVVRVRSREARRIRDPPK 208
>UniRef50_A2DST7 Cluster: 40S ribosomal protein S26, putative; n=1;
Trichomonas vaginalis G3|Rep: 40S ribosomal protein S26,
putative - Trichomonas vaginalis G3
Length = 118
Score = 100 bits (240), Expect = 1e-20
Identities = 42/81 (51%), Positives = 58/81 (71%)
Frame = +1
Query: 85 HVKAVXCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVS 264
H + V C NC R VPKDKAI +F I+N+V+A++ +D++DA +Y ++LPK Y K +YCVS
Sbjct: 17 HTRTVNCMNCGRQVPKDKAITRFAIKNMVDASSAKDVSDACIYQGYELPKTYQKQYYCVS 76
Query: 265 CAIHSKVVRNRSKKDRRIRTP 327
CA+H VVR R+ RR R P
Sbjct: 77 CAVHRHVVRPRNVNVRRNRVP 97
>UniRef50_Q23PT4 Cluster: Ribosomal protein S26e containing protein;
n=12; Alveolata|Rep: Ribosomal protein S26e containing
protein - Tetrahymena thermophila SB210
Length = 197
Score = 97.9 bits (233), Expect = 1e-19
Identities = 44/87 (50%), Positives = 60/87 (68%), Gaps = 2/87 (2%)
Frame = +1
Query: 85 HVKAVXCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQ--LPKLYAKLHYC 258
H + V CTNC R V KDKA+K++ +R++V+ ++ RDI + + +PKLY KL YC
Sbjct: 95 HTRTVPCTNCGRQVAKDKAVKRYTVRDMVDPSSKRDIQQKLAFENEKQGIPKLYVKLQYC 154
Query: 259 VSCAIHSKVVRNRSKKDRRIRTPPKSN 339
+SCAIHS+VVR R +DRRIR PP N
Sbjct: 155 ISCAIHSRVVRVRCAEDRRIRRPPIRN 181
>UniRef50_Q9BHU1 Cluster: 40S ribosomal protein S26; n=1; Sterkiella
nova|Rep: 40S ribosomal protein S26 - Oxytricha nova
Length = 125
Score = 97.5 bits (232), Expect = 1e-19
Identities = 50/97 (51%), Positives = 63/97 (64%), Gaps = 2/97 (2%)
Frame = +1
Query: 85 HVKAVXCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPM--FQLPKLYAKLHYC 258
H V CTNC R V KDKAIK+F RN+V+A++ RDI + Y F +PK+Y KL YC
Sbjct: 17 HADTVRCTNCGRVVSKDKAIKRFQQRNMVDASSKRDIQENYAYAQSDFTMPKIYVKLSYC 76
Query: 259 VSCAIHSKVVRNRSKKDRRIRTPPKSNFPRDMSRPQA 369
VSCAIH+++VR RS +DRR R K R RP+A
Sbjct: 77 VSCAIHARIVRVRSVEDRRHRYTTKL---RQHVRPEA 110
>UniRef50_Q4Q6X0 Cluster: Ribosomal protein s26, putative; n=6;
Trypanosomatidae|Rep: Ribosomal protein s26, putative -
Leishmania major
Length = 112
Score = 89.0 bits (211), Expect = 5e-17
Identities = 42/87 (48%), Positives = 59/87 (67%), Gaps = 2/87 (2%)
Frame = +1
Query: 88 VKAVXCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDAS-VY-PMFQLPKLYAKLHYCV 261
VK + C NC R PKDKA+ +FV+R +++AA+ RD+ +AS VY F +PKLY K +C+
Sbjct: 20 VKPIHCFNCGRLTPKDKAVGRFVVRRMLDAASARDVAEASPVYGANFPMPKLYMKQRFCI 79
Query: 262 SCAIHSKVVRNRSKKDRRIRTPPKSNF 342
+CAIHS+ VR R +R+IR K F
Sbjct: 80 ACAIHSRTVRARPVGNRKIRYTKKVPF 106
>UniRef50_Q8SRN2 Cluster: 40S RIBOSOMAL PROTEIN S26; n=2;
Apansporoblastina|Rep: 40S RIBOSOMAL PROTEIN S26 -
Encephalitozoon cuniculi
Length = 105
Score = 83.0 bits (196), Expect = 3e-15
Identities = 33/76 (43%), Positives = 54/76 (71%)
Frame = +1
Query: 94 AVXCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSCAI 273
++ C C PKDKAIK+F I++++E A+ D+ A++Y +F++P++ K +CVSCA
Sbjct: 17 SIQCDKCGSVTPKDKAIKRFRIQSLIEQASFDDLKQATIYDVFEVPRMGYKSQFCVSCAC 76
Query: 274 HSKVVRNRSKKDRRIR 321
H+K+VR RS + R+IR
Sbjct: 77 HAKIVRVRSSQARKIR 92
>UniRef50_UPI00005A1FB7 Cluster: PREDICTED: similar to 40S ribosomal
protein S26 isoform 3; n=1; Canis lupus familiaris|Rep:
PREDICTED: similar to 40S ribosomal protein S26 isoform
3 - Canis familiaris
Length = 118
Score = 81.8 bits (193), Expect = 7e-15
Identities = 36/43 (83%), Positives = 41/43 (95%)
Frame = +1
Query: 85 HVKAVXCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVY 213
HV+ + CTNCARCVPKDKAIKKFVIRNIVEAAAVRDI++ASV+
Sbjct: 17 HVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVF 59
>UniRef50_Q9AW37 Cluster: 40S ribosomal protein S26; n=1; Guillardia
theta|Rep: 40S ribosomal protein S26 - Guillardia theta
(Cryptomonas phi)
Length = 98
Score = 81.0 bits (191), Expect = 1e-14
Identities = 34/78 (43%), Positives = 55/78 (70%)
Frame = +1
Query: 88 VKAVXCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSC 267
V+ + C + VPKDKAI ++VI+NIV+ +++RD+ D+ +Y + +PKLY K + +
Sbjct: 18 VRRIHCNLTGKLVPKDKAIVRYVIKNIVDLSSLRDLQDSCIYEYYTMPKLYYKNTFSIES 77
Query: 268 AIHSKVVRNRSKKDRRIR 321
AIH+++VR RSK DR+ R
Sbjct: 78 AIHNRIVRVRSKADRKKR 95
>UniRef50_UPI0000DA2056 Cluster: PREDICTED: similar to Ankyrin
repeat domain protein 11 (Ankyrin repeat-containing
cofactor 1); n=1; Rattus norvegicus|Rep: PREDICTED:
similar to Ankyrin repeat domain protein 11 (Ankyrin
repeat-containing cofactor 1) - Rattus norvegicus
Length = 682
Score = 65.3 bits (152), Expect = 7e-10
Identities = 32/55 (58%), Positives = 39/55 (70%)
Frame = +1
Query: 85 HVKAVXCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKL 249
+V+ + NC + +PKDKA KKFV RNIVEAAAVRDI +A+V LPK Y KL
Sbjct: 36 YVRPIGYMNCVQYMPKDKASKKFVTRNIVEAAAVRDIAEANVLDANVLPKFYIKL 90
>UniRef50_Q3LVZ2 Cluster: Ribosomal protein S26; n=1; Bigelowiella
natans|Rep: Ribosomal protein S26 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 98
Score = 57.6 bits (133), Expect = 1e-07
Identities = 27/78 (34%), Positives = 44/78 (56%)
Frame = +1
Query: 85 HVKAVXCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVS 264
HV + C + VP+DKAIKK ++++ ++D + V P ++ PKLY+ + Y +S
Sbjct: 17 HVNRIHCMSSNALVPRDKAIKKLNVKSLFFPNILKDTPNVFVLPGYKAPKLYSYVFYSIS 76
Query: 265 CAIHSKVVRNRSKKDRRI 318
A K ++ KK RRI
Sbjct: 77 SAFSQKFIKPGRKKYRRI 94
>UniRef50_UPI0000DC1C52 Cluster: UPI0000DC1C52 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC1C52 UniRef100 entry -
Rattus norvegicus
Length = 70
Score = 48.8 bits (111), Expect = 6e-05
Identities = 31/59 (52%), Positives = 34/59 (57%)
Frame = +1
Query: 109 NCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSCAIHSKV 285
N C+ KDKA KFVI+NIVEAAA+R Y KLH CVSCAIH KV
Sbjct: 28 NFTGCMTKDKA-NKFVIQNIVEAAAIR---------------FYVKLHCCVSCAIHIKV 70
>UniRef50_Q6CS02 Cluster: Similarity; n=1; Kluyveromyces lactis|Rep:
Similarity - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 157
Score = 48.4 bits (110), Expect = 8e-05
Identities = 33/100 (33%), Positives = 46/100 (46%)
Frame = -3
Query: 336 TLGRSTDSSVFLRSVPDNFAVDGA*HAXXXXXXXXXXXEHWVYRGIVNISDRRRFYDVPN 157
+L RS+DSSV S +N +VD A + V RG ISD F DV +
Sbjct: 30 SLWRSSDSSVSSGSDSNNSSVDSARNTVVQLVVGLWKSIFSVDRGFRQISDSSSFNDVSD 89
Query: 156 HELFDGLVLWHAPRAVCAXHGFNVTTXMLGAAXXTALTRH 37
DGLVLW+ V +VT+ +L + ++L H
Sbjct: 90 SHSLDGLVLWNRSGTVDTSDRLDVTSTLLVSTVGSSLLWH 129
>UniRef50_A3H8X5 Cluster: Ribosomal protein S26E; n=2;
Thermoprotei|Rep: Ribosomal protein S26E - Caldivirga
maquilingensis IC-167
Length = 152
Score = 47.2 bits (107), Expect = 2e-04
Identities = 24/90 (26%), Positives = 45/90 (50%)
Frame = +1
Query: 97 VXCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSCAIH 276
V C NC + +P+ KA++ V + + +++ +P+ Y YCV+CAI+
Sbjct: 25 VYCDNCGKMIPRSKAVRVTVPYSPIPTDLAKELEKQGAI----VPRYYITKTYCVNCAIY 80
Query: 277 SKVVRNRSKKDRRIRTPPKSNFPRDMSRPQ 366
+++ RS+ +R+ + P R RPQ
Sbjct: 81 LGIIKVRSEDERKSKKP----ILRGQQRPQ 106
>UniRef50_Q05DX2 Cluster: 30S ribosomal protein S26e; n=5;
Crenarchaeota|Rep: 30S ribosomal protein S26e -
Aeropyrum pernix
Length = 95
Score = 40.7 bits (91), Expect = 0.016
Identities = 24/73 (32%), Positives = 36/73 (49%)
Frame = +1
Query: 97 VXCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSCAIH 276
V C NC R VP DKAI + + V+ ++ M + P YCVSCA+H
Sbjct: 21 VQCDNCGRVVPADKAICVTRMYSPVDPQLAEELEKKGAIIM-RYPVTKC---YCVSCAVH 76
Query: 277 SKVVRNRSKKDRR 315
+V+ R ++ R+
Sbjct: 77 YGIVKIRPEEQRK 89
>UniRef50_Q8ZVQ6 Cluster: Ribosomal protein S26; n=10;
Thermoprotei|Rep: Ribosomal protein S26 - Pyrobaculum
aerophilum
Length = 98
Score = 39.1 bits (87), Expect = 0.050
Identities = 17/75 (22%), Positives = 38/75 (50%)
Frame = +1
Query: 103 CTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSCAIHSK 282
C NC + +P+ KA++ V + V R++ + + YC++CA+
Sbjct: 23 CDNCGKIMPRSKAVRVTVPYSPVPPDLARELEKQGAI----ISRYLVTKTYCINCAVFFG 78
Query: 283 VVRNRSKKDRRIRTP 327
+++ RS+++R+ + P
Sbjct: 79 IIKVRSREERKKKIP 93
>UniRef50_UPI0000499B8D Cluster: hypothetical protein 53.t00011;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 53.t00011 - Entamoeba histolytica HM-1:IMSS
Length = 586
Score = 32.3 bits (70), Expect = 5.7
Identities = 16/46 (34%), Positives = 29/46 (63%)
Frame = +1
Query: 109 NCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAK 246
N ++C+PKDK++ ++V N ++ +RDI +VY + + KL K
Sbjct: 173 NESKCIPKDKSLNEYVENNPIK-FTIRDI--VTVYSISDIKKLMMK 215
>UniRef50_A7P6R9 Cluster: Chromosome chr9 scaffold_7, whole genome
shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
chr9 scaffold_7, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 858
Score = 32.3 bits (70), Expect = 5.7
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = -3
Query: 213 VYRGIVNISDRRRFYDVPNHELFDGLVLWHAPRAVCAXHGF 91
VY G +SD +R ++V E F L+LW++ HG+
Sbjct: 75 VYAGFGLVSDAQRVFEVSPIECFSNLLLWNSILRANVAHGY 115
>UniRef50_Q7RHF5 Cluster: Putative uncharacterized protein PY04032;
n=4; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein PY04032 - Plasmodium yoelii yoelii
Length = 1508
Score = 31.5 bits (68), Expect = 10.0
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 6/73 (8%)
Frame = +1
Query: 124 VPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSCAI-HSKVVRNRS 300
V K + +K I+ I+ A+ +IND + MF + + CV+ I H+ + RN +
Sbjct: 589 VEKKRCEQKLDIKKIINNDALTNINDLEIRKMFDSSEYNTEKINCVTGDICHTTMFRNNN 648
Query: 301 -----KKDRRIRT 324
KKD++I++
Sbjct: 649 SNHEEKKDKKIKS 661
>UniRef50_Q74N49 Cluster: NEQ043; n=1; Nanoarchaeum equitans|Rep:
NEQ043 - Nanoarchaeum equitans
Length = 84
Score = 31.5 bits (68), Expect = 10.0
Identities = 19/71 (26%), Positives = 34/71 (47%)
Frame = +1
Query: 91 KAVXCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSCA 270
K V C C R +PK+KA + N+ ++++ V +F + K++ C SCA
Sbjct: 11 KTVRCYYCGRILPKEKAYVIYTKPNV-----AGELSENEVIAVFSQKR---KIYVCPSCA 62
Query: 271 IHSKVVRNRSK 303
H + +R +
Sbjct: 63 RHRGIKDHRKE 73
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 371,856,555
Number of Sequences: 1657284
Number of extensions: 6310639
Number of successful extensions: 15021
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 14611
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15010
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 26870548160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -