Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_F_K03
(807 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC417.12 |||carboxylesterase-lipase family |Schizosaccharomyce... 34 0.021
SPCC31H12.06 |mug111||sequence orphan|Schizosaccharomyces pombe|... 28 1.8
SPAC26H5.08c |bgl2||glucan 1,3-beta-glucosidase Bgl2|Schizosacch... 27 3.1
SPAC9E9.03 |leu2||3-isopropylmalate dehydratase Leu2 |Schizosacc... 27 4.1
SPAC630.08c |erg25||C-4 methylsterol oxidase|Schizosaccharomyces... 26 7.2
SPBC20F10.02c |||DUF1741 family protein|Schizosaccharomyces pomb... 26 7.2
SPBC17A3.03c |||phosphoprotein phosphatase |Schizosaccharomyces ... 26 7.2
SPBC365.12c |ish1||LEA domain protein|Schizosaccharomyces pombe|... 26 7.2
SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom... 25 9.6
SPAC13G7.10 |mug152||transcription factor |Schizosaccharomyces p... 25 9.6
SPAC1565.07c |||TATA binding protein interacting protein |Schizo... 25 9.6
>SPCC417.12 |||carboxylesterase-lipase family |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 520
Score = 34.3 bits (75), Expect = 0.021
Identities = 15/36 (41%), Positives = 24/36 (66%), Gaps = 3/36 (8%)
Frame = +2
Query: 542 EDCLTINVYIPALARKPL---PVMVYVHGGAFVLGS 640
EDCL +N+++PA KP PV+ ++HGG +G+
Sbjct: 80 EDCLFLNIWVPA-GEKPAEGWPVLYFIHGGWLQVGN 114
>SPCC31H12.06 |mug111||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 468
Score = 27.9 bits (59), Expect = 1.8
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = -1
Query: 177 FINIIVLLRTSLLFYHMSNIIHHEVNFCFRSI 82
F+ I+LLR SLL ++ + H +NF F S+
Sbjct: 174 FLGSILLLRVSLLQLYLISWTIHFINFVFHSL 205
>SPAC26H5.08c |bgl2||glucan 1,3-beta-glucosidase
Bgl2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 321
Score = 27.1 bits (57), Expect = 3.1
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +2
Query: 503 MCPQASIIGIIGSEDCLTINVYIPALARKP 592
+ P ++I + DC T+ +PALA+ P
Sbjct: 68 LAPYTNMIRTYATSDCNTLEYLLPALAQSP 97
>SPAC9E9.03 |leu2||3-isopropylmalate dehydratase Leu2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 758
Score = 26.6 bits (56), Expect = 4.1
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +2
Query: 344 IEQGILSGKISPDGSFFEYV 403
IE G +G I+PD + FEYV
Sbjct: 236 IEAGARAGMIAPDATTFEYV 255
>SPAC630.08c |erg25||C-4 methylsterol oxidase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 300
Score = 25.8 bits (54), Expect = 7.2
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +1
Query: 520 DYWDYWFRRLFNYKRVHTRFSEK 588
D W YW RLF+Y + RF K
Sbjct: 147 DTWHYWAHRLFHY-GIFYRFIHK 168
>SPBC20F10.02c |||DUF1741 family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 600
Score = 25.8 bits (54), Expect = 7.2
Identities = 9/30 (30%), Positives = 20/30 (66%)
Frame = -2
Query: 287 QDISYASLLLCFILYFIKALFHF*FISYLH 198
+D+ + L F+L+F+ L++ FIS+++
Sbjct: 141 EDVQSVEISLRFVLHFVSFLYNSSFISHIY 170
>SPBC17A3.03c |||phosphoprotein phosphatase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 263
Score = 25.8 bits (54), Expect = 7.2
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +2
Query: 419 TSNINTRFK-APLPPPSWNGVFKAVEETSMCPQASIIGIIGSEDCLTI 559
TSN + F +PL P ++ V+ + S CP+AS + S TI
Sbjct: 45 TSNDASTFSNSPLVPDNFGVVYPGIIYRSACPRASNFNFLESLHIRTI 92
>SPBC365.12c |ish1||LEA domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 684
Score = 25.8 bits (54), Expect = 7.2
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = -1
Query: 450 GALNLVLMLLVAYGIPTYSKNDPSGL 373
G L ++ + YG TY KND S +
Sbjct: 10 GVLLAIVFYIFTYGFSTYRKNDTSAV 35
>SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 781
Score = 25.4 bits (53), Expect = 9.6
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +1
Query: 439 VQGAIAATIMEWSFQSSRRNIYVSASI 519
+Q AIA T + F +SRRN +S SI
Sbjct: 137 LQSAIAQTGNNYMFTTSRRNNSISGSI 163
>SPAC13G7.10 |mug152||transcription factor |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 390
Score = 25.4 bits (53), Expect = 9.6
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = -1
Query: 741 PKHIKPKAPSL*LNVTKITSCLTRKSGAYNSLPPLPST 628
P H++P S LN + + S +N+ PPLPST
Sbjct: 342 PLHLEPPLSSNTLNSSTLPQ---PNSTDFNTFPPLPST 376
>SPAC1565.07c |||TATA binding protein interacting protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1220
Score = 25.4 bits (53), Expect = 9.6
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +2
Query: 488 VEETSMCPQASIIGIIGSEDCLTINVYIPALARKPLPVMV 607
+ E S+C + II +I E+ L + + A+KP+ MV
Sbjct: 758 LNEESVCLLSRIIAVISKEEDLELIINSFTCAQKPVEEMV 797
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,171,908
Number of Sequences: 5004
Number of extensions: 68576
Number of successful extensions: 191
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 183
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 190
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 392429240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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