Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_F_K02
(771 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI00015B6099 Cluster: PREDICTED: similar to Mitochondr... 195 9e-49
UniRef50_UPI0000DB6B51 Cluster: PREDICTED: similar to mitochondr... 185 9e-46
UniRef50_Q9VXQ0 Cluster: CG8288-PA; n=7; Neoptera|Rep: CG8288-PA... 183 4e-45
UniRef50_Q5DGM0 Cluster: SJCHGC01793 protein; n=2; Schistosoma j... 120 3e-26
UniRef50_UPI0000E48888 Cluster: PREDICTED: similar to mitochondr... 95 2e-18
UniRef50_P09001 Cluster: Mitochondrial 39S ribosomal protein L3;... 89 9e-17
UniRef50_Q5KGQ8 Cluster: Ribosomal large subunit assembly and ma... 75 1e-12
UniRef50_P49404 Cluster: Putative mitochondrial 39S ribosomal pr... 73 6e-12
UniRef50_A7SQV4 Cluster: Predicted protein; n=1; Nematostella ve... 60 8e-08
UniRef50_Q9LRN8 Cluster: 50S ribosomal protein L3-2, chloroplast... 54 4e-06
UniRef50_A0D1W5 Cluster: Chromosome undetermined scaffold_34, wh... 49 1e-04
UniRef50_Q22HG3 Cluster: Ribosomal protein L3 containing protein... 44 0.003
UniRef50_Q54I61 Cluster: Putative uncharacterized protein; n=1; ... 42 0.017
UniRef50_Q7WRC5 Cluster: 50S ribosomal protein L3; n=112; Bacter... 40 0.091
UniRef50_Q0CHL1 Cluster: 60S ribosomal protein L9, mitochondrial... 37 0.64
UniRef50_Q2JFH6 Cluster: 50S ribosomal protein L3; n=53; Bacteri... 37 0.64
UniRef50_A6NRY7 Cluster: Putative uncharacterized protein; n=1; ... 36 1.5
UniRef50_Q5P332 Cluster: 50S ribosomal protein L3; n=9; Bacteria... 36 1.5
UniRef50_A3HUN9 Cluster: Putative uncharacterized protein; n=1; ... 35 2.6
UniRef50_A0AFR7 Cluster: Complete genome; n=7; Listeria|Rep: Com... 34 3.4
UniRef50_A2FG46 Cluster: Putative uncharacterized protein; n=2; ... 34 3.4
UniRef50_Q3YRK9 Cluster: 50S ribosomal protein L3; n=3; Anaplasm... 34 3.4
UniRef50_Q22KH8 Cluster: Putative uncharacterized protein; n=1; ... 34 4.5
UniRef50_Q3Y0K3 Cluster: Putative uncharacterized protein; n=1; ... 33 5.9
UniRef50_Q4N6B8 Cluster: Putative uncharacterized protein; n=2; ... 33 5.9
UniRef50_Q23EV8 Cluster: Putative uncharacterized protein; n=1; ... 33 5.9
UniRef50_A7TEL2 Cluster: Putative uncharacterized protein; n=1; ... 33 5.9
>UniRef50_UPI00015B6099 Cluster: PREDICTED: similar to Mitochondrial
39S ribosomal protein L3; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to Mitochondrial 39S ribosomal
protein L3 - Nasonia vitripennis
Length = 375
Score = 195 bits (476), Expect = 9e-49
Identities = 97/182 (53%), Positives = 125/182 (68%), Gaps = 1/182 (0%)
Frame = +3
Query: 225 PRFRPPYWYVPKERVWTDDYLTKENKQFLEEVIKDKLEAQTALEKKALTSPILNDVKKNV 404
PR R P W+V + RV ++ LTKENK+F++ VI+DK A SP+ + + V
Sbjct: 39 PRKRFPPWFVKQTRVQHEEDLTKENKEFIQTVIRDKYPLPDIGFGSA--SPLKLETIEPV 96
Query: 405 T-WTPQTKRVGLIARKIGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVK 581
T W P +RVG++ARKIG P+W KDGKKV TT+ QV DNHVIKYIPPEEYKPMI
Sbjct: 97 TEWKPHYQRVGVLARKIGIVPMWMKDGKKVLTTMFQVADNHVIKYIPPEEYKPMITQKKN 156
Query: 582 WVEKQKYGCILVGAENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPESALPNGTPLYA 761
+ + GC+LVGA++ DP + TK+YCG+F+ G++PKR L RF VSPE AL GTPL+A
Sbjct: 157 PLPRNT-GCLLVGADSCDPQLFTKEYCGLFNEAGVMPKRLLARFHVSPEGALQPGTPLFA 215
Query: 762 TH 767
TH
Sbjct: 216 TH 217
>UniRef50_UPI0000DB6B51 Cluster: PREDICTED: similar to mitochondrial
ribosomal protein L3 CG8288-PA; n=1; Apis mellifera|Rep:
PREDICTED: similar to mitochondrial ribosomal protein L3
CG8288-PA - Apis mellifera
Length = 352
Score = 185 bits (451), Expect = 9e-46
Identities = 88/182 (48%), Positives = 123/182 (67%), Gaps = 1/182 (0%)
Frame = +3
Query: 225 PRFRPPYWYVPKERVWTDDYLTKENKQFLEEVIKDKLEAQTALEKKALTSPILND-VKKN 401
P+ R P W RV ++ LT ENK+FL E++ + L TSP+ N+ ++ N
Sbjct: 26 PKKRHPEWLPKPTRVLYNEELTSENKEFLSEIVSS---TKGLLNNN--TSPLNNELIQSN 80
Query: 402 VTWTPQTKRVGLIARKIGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVK 581
TWTP +KR GLI +KIG YP+W K+G+KV TTL+Q+VDN V+KYIPPEEYKP+ ++
Sbjct: 81 ATWTPNSKRTGLIGKKIGVYPMWLKNGRKVLTTLIQIVDNEVVKYIPPEEYKPV--KPIR 138
Query: 582 WVEKQKYGCILVGAENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPESALPNGTPLYA 761
+ K GC+++GA N+DP ++TK+Y GIF+ G+ PK+ L RF +SP + L GTPLYA
Sbjct: 139 HRIEVKNGCLVLGAINVDPQLLTKEYYGIFNKAGVTPKKVLMRFTISPNAVLQPGTPLYA 198
Query: 762 TH 767
TH
Sbjct: 199 TH 200
>UniRef50_Q9VXQ0 Cluster: CG8288-PA; n=7; Neoptera|Rep: CG8288-PA -
Drosophila melanogaster (Fruit fly)
Length = 362
Score = 183 bits (446), Expect = 4e-45
Identities = 87/187 (46%), Positives = 120/187 (64%)
Frame = +3
Query: 207 RGASRQPRFRPPYWYVPKERVWTDDYLTKENKQFLEEVIKDKLEAQTALEKKALTSPILN 386
+G +PR R P W++ KE +D +T ENKQF+ EV + ++ + +
Sbjct: 28 KGHLSRPRLRNPQWFLRKEITKYNDLMTAENKQFVNEVGTNNFGVPAVIKDSLVKTA--G 85
Query: 387 DVKKNVTWTPQTKRVGLIARKIGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPEEYKPMI 566
WTP +R G+IARKIG YPLW K+G+++ TTLLQ+VDNHVIKYIPPEEY P
Sbjct: 86 PTANEAVWTPNLRRCGVIARKIGQYPLWLKNGERIRTTLLQIVDNHVIKYIPPEEYLPAQ 145
Query: 567 KSNVKWVEKQKYGCILVGAENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPESALPNG 746
V + K+ GCILVG+E +P+++TK+Y GIF + G+LPK++L RF+VSPE+ L G
Sbjct: 146 VPTVANLHKR--GCILVGSETTNPALLTKEYAGIFRNSGVLPKKNLARFIVSPEAQLAPG 203
Query: 747 TPLYATH 767
TPL H
Sbjct: 204 TPLNVNH 210
>UniRef50_Q5DGM0 Cluster: SJCHGC01793 protein; n=2; Schistosoma
japonicum|Rep: SJCHGC01793 protein - Schistosoma
japonicum (Blood fluke)
Length = 391
Score = 120 bits (290), Expect = 3e-26
Identities = 71/191 (37%), Positives = 102/191 (53%), Gaps = 13/191 (6%)
Frame = +3
Query: 234 RPPYWYVPKERVWTDDYLTKENKQFLEEVIKDKLEAQTALEKKALTSPILNDVKKNVTWT 413
+ P+W + + D+ +T ENK+FLE + ++EA T TSPI+ + V WT
Sbjct: 39 KKPFWVTQEANPYADEDITPENKEFLE---RQRIEALT-------TSPIITEQWTQVPWT 88
Query: 414 PQ-TKRVGLIARKIGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPEEYKPMI-------- 566
P T+R GLIA K+G YPLW K G+K+ T+ QV DNH ++Y PP E I
Sbjct: 89 PYVTQRCGLIAIKLGVYPLWTKTGEKMDCTVFQVPDNHALRYTPPSEIDKYISLLHPRHY 148
Query: 567 ----KSNVKWVEKQKYGCILVGAENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPESA 734
K W+ ++++G LVGA + D + G+ PKR + RF+VSP++A
Sbjct: 149 WLNSKRPPSWITQKRWGIQLVGAFSADLLNSLLNGVAYLKEAGVPPKRKISRFLVSPDAA 208
Query: 735 LPNGTPLYATH 767
L GTPL H
Sbjct: 209 LKPGTPLSVHH 219
>UniRef50_UPI0000E48888 Cluster: PREDICTED: similar to mitochondrial
ribosomal protein L3; n=2; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to mitochondrial
ribosomal protein L3 - Strongylocentrotus purpuratus
Length = 343
Score = 95.1 bits (226), Expect = 2e-18
Identities = 61/168 (36%), Positives = 95/168 (56%), Gaps = 7/168 (4%)
Frame = +3
Query: 285 LTKEN-KQFLEEVIKDKL--EAQTALEKKALTSPILNDVKK----NVTWTPQTKRVGLIA 443
L+KEN +F + ++ L E +T + K + T +++ +K+ WTPQ+KR G+IA
Sbjct: 60 LSKENFNRFKQRPVEGDLTKENETFVYKWSQTKHMMSPLKQAPWLKGEWTPQSKRAGVIA 119
Query: 444 RKIGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKYGCILVGA 623
K+G PLW K+GK+V TTLLQV++ +VI + P + ++ G +LV A
Sbjct: 120 IKLGMQPLWTKEGKRVPTTLLQVLECNVIDFHP---------QGLNGSDRP--GTVLVAA 168
Query: 624 ENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPESALPNGTPLYATH 767
+N P ++Y +F SV + K H+ F V+ +AL GTPLYA H
Sbjct: 169 KNAPPYYKDEEYADLFKSVCLPVKEHITSFNVTDNAALQPGTPLYAAH 216
>UniRef50_P09001 Cluster: Mitochondrial 39S ribosomal protein L3;
n=31; Deuterostomia|Rep: Mitochondrial 39S ribosomal
protein L3 - Homo sapiens (Human)
Length = 348
Score = 89.4 bits (212), Expect = 9e-17
Identities = 55/170 (32%), Positives = 86/170 (50%)
Frame = +3
Query: 258 KERVWTDDYLTKENKQFLEEVIKDKLEAQTALEKKALTSPILNDVKKNVTWTPQTKRVGL 437
K W D++L++EN F+++++ D+ +AQ A + P+ ++ W P + RVGL
Sbjct: 44 KSGTWWDEHLSEENVPFIKQLVSDEDKAQLASK----LCPLKDEPWPIHPWEPGSFRVGL 99
Query: 438 IARKIGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKYGCILV 617
IA K+G PLW KDG+K TLLQV D HV+KY E K + V
Sbjct: 100 IALKLGMMPLWTKDGQKHVVTLLQVQDCHVLKYTSKENC------------NGKMATLSV 147
Query: 618 GAENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPESALPNGTPLYATH 767
G + + + +G+ PK+ + F ++ +A+ GTPLYA H
Sbjct: 148 GGKTVSRFRKATSILEFYRELGLPPKQTVKIFNITDNAAIKPGTPLYAAH 197
>UniRef50_Q5KGQ8 Cluster: Ribosomal large subunit assembly and
maintenance-related protein, putative; n=1;
Filobasidiella neoformans|Rep: Ribosomal large subunit
assembly and maintenance-related protein, putative -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 308
Score = 75.4 bits (177), Expect = 1e-12
Identities = 46/120 (38%), Positives = 58/120 (48%)
Frame = +3
Query: 408 WTPQTKRVGLIARKIGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWV 587
WTPQT R GLIARK G LW DG++ T+LQV N V+++ PP P
Sbjct: 38 WTPQTLRTGLIARKRGMTALWDADGRRWPVTVLQVDANQVVRHSPPPPTSP--------- 88
Query: 588 EKQKYGCILVGAENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPESALPNGTPLYATH 767
Y + +GA TK G F G+ PK L F VS ++ +P GT L A H
Sbjct: 89 ----YHTLQIGASPRREKTTTKQQLGHFKKAGVEPKYRLKEFQVSEDAVVPVGTELSAGH 144
>UniRef50_P49404 Cluster: Putative mitochondrial 39S ribosomal
protein L3; n=2; Caenorhabditis|Rep: Putative
mitochondrial 39S ribosomal protein L3 - Caenorhabditis
elegans
Length = 403
Score = 73.3 bits (172), Expect = 6e-12
Identities = 64/190 (33%), Positives = 91/190 (47%), Gaps = 7/190 (3%)
Frame = +3
Query: 219 RQPRFRPPYWYVP-KERVWTDDY-LTKENKQFLEEVI-KDKLEAQT-ALEKKALTSPILN 386
R+ P W P KE V +++ K LE VI K+ L A T A + T+ +
Sbjct: 35 RRRTLTPAPWLPPVKESVPKSSVGISQGTKNLLETVIEKETLAASTIAFQNSQETNVSVV 94
Query: 387 DVKKNVTWTPQTKRVGLIARKIGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPEE-YKPM 563
D+ + ++RVGL+ RKIG P W +G ++ T+L+V +NHV+ PE YK
Sbjct: 95 DIPDS------SRRVGLVVRKIGMLPQWTNEGNRILCTVLEVDENHVVSITSPEAWYKSS 148
Query: 564 IKSNVKWVEKQ-KYGCILVGAENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPESALP 740
K + + VGA N DP+ T Y F G+ K L F+V+ E ALP
Sbjct: 149 AVGKRKAFNRHGPMWRVTVGAGNDDPTKYTLGYRRQFVRAGIPVKEKLGCFLVT-EDALP 207
Query: 741 N-GTPLYATH 767
+ G PL A H
Sbjct: 208 SAGQPLDARH 217
>UniRef50_A7SQV4 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 264
Score = 59.7 bits (138), Expect = 8e-08
Identities = 37/121 (30%), Positives = 60/121 (49%), Gaps = 1/121 (0%)
Frame = +3
Query: 408 WTPQTKRVGLIARKIGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWV 587
W +KR G + K+G LW KDG+++ TL+Q+ D V+ + +
Sbjct: 2 WQKSSKRTGAVGVKLGMSALWLKDGRRLPVTLIQIKDCEVV--------QARVAKGHGGR 53
Query: 588 EKQKYGCILVGAEN-IDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPESALPNGTPLYAT 764
+ Q + VGA N ++ + + K G F + PKR +C F V+P++ L GTP+ A
Sbjct: 54 DPQTE--LQVGAVNKLELNQIGKAQFGHFKRFSVRPKRKVCSFPVTPDALLTPGTPITAA 111
Query: 765 H 767
H
Sbjct: 112 H 112
>UniRef50_Q9LRN8 Cluster: 50S ribosomal protein L3-2, chloroplast
precursor; n=6; Magnoliophyta|Rep: 50S ribosomal protein
L3-2, chloroplast precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 324
Score = 54.0 bits (124), Expect = 4e-06
Identities = 40/117 (34%), Positives = 57/117 (48%)
Frame = +3
Query: 417 QTKRVGLIARKIGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQ 596
++KR G+IA K G LW K GK++ ++L V DN I S VK VEK+
Sbjct: 73 RSKRTGIIAVKCGMTALWDKWGKRIPISILWVDDN--------------IVSQVKTVEKE 118
Query: 597 KYGCILVGAENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPESALPNGTPLYATH 767
+ +G P ++K G F + G+ KR L F V+ ++ LP GT L H
Sbjct: 119 GIFALQIGCGQKKPKHLSKAVVGHFRAQGVPLKRKLREFPVTEDALLPVGTSLGVRH 175
>UniRef50_A0D1W5 Cluster: Chromosome undetermined scaffold_34, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_34,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 409
Score = 49.2 bits (112), Expect = 1e-04
Identities = 34/115 (29%), Positives = 55/115 (47%)
Frame = +3
Query: 423 KRVGLIARKIGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKY 602
KR GLIA K+G W K G + + T+LQ+ +N V++ V+ Y
Sbjct: 149 KRAGLIAVKVGMTAQWDKWGYRHALTVLQLDNNQVVQV----------------VKNDTY 192
Query: 603 GCILVGAENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPESALPNGTPLYATH 767
+ +GA ++ + K G F + PK+++ F ++PE+ LP G L A H
Sbjct: 193 TGLQIGAGRVNIKTLKKPQIGHFLKANIPPKKYIKEFPITPENTLPVGFMLTARH 247
>UniRef50_Q22HG3 Cluster: Ribosomal protein L3 containing protein;
n=1; Tetrahymena thermophila SB210|Rep: Ribosomal
protein L3 containing protein - Tetrahymena thermophila
SB210
Length = 488
Score = 44.4 bits (100), Expect = 0.003
Identities = 35/119 (29%), Positives = 51/119 (42%)
Frame = +3
Query: 411 TPQTKRVGLIARKIGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVE 590
T +KR G++ K+G +W K GK + T++Q+ V++ VK E
Sbjct: 229 TKTSKRTGILGYKLGMTSIWDKWGKLHALTVIQIDRCQVVQ--------------VKTEE 274
Query: 591 KQKYGCILVGAENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPESALPNGTPLYATH 767
K + +G + K G + PKRHL F VSP+ LP G L A H
Sbjct: 275 KDGVNALQLGVGEKSLKRINKPTIGHLMKNDIPPKRHLKEFKVSPDCFLPAGYMLSARH 333
>UniRef50_Q54I61 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 351
Score = 41.9 bits (94), Expect = 0.017
Identities = 39/138 (28%), Positives = 60/138 (43%), Gaps = 1/138 (0%)
Frame = +3
Query: 357 KKALTSPILNDVKKNVTWTPQTKRVGLIARKIGNYPLWCKDGKKVSTTLLQVVDNHVIKY 536
+KA+ +P D K WT + RVG I +K+G + D T++Q+ +N V
Sbjct: 45 QKAMEAPFRRDTKSG--WTKVSHRVGAIGKKVGMLTTYIGD-IAYPVTVIQLPNNQVT-- 99
Query: 537 IPPEEYKPMIKSNVKWVEKQKYGCILVGAENIDPSVVTKDYCGIFDSVGMLPKRHLCRFV 716
+ K + V ++ VGA+ I V+K G F + PKR L F
Sbjct: 100 ----QIKRKVNDGVDMIQ--------VGADEIKLKNVSKTLQGHFAKANVPPKRVLMEFR 147
Query: 717 VSPESA-LPNGTPLYATH 767
V+ + L GTP+ H
Sbjct: 148 VTRNAMNLELGTPILPKH 165
>UniRef50_Q7WRC5 Cluster: 50S ribosomal protein L3; n=112;
Bacteria|Rep: 50S ribosomal protein L3 - Bordetella
bronchiseptica (Alcaligenes bronchisepticus)
Length = 233
Score = 39.5 bits (88), Expect = 0.091
Identities = 17/43 (39%), Positives = 27/43 (62%)
Frame = +3
Query: 399 NVTWTPQTKRVGLIARKIGNYPLWCKDGKKVSTTLLQVVDNHV 527
N T TP R+GL+ RK+G ++ +DG+ + T+L V +N V
Sbjct: 7 NSTPTPAAHRLGLVGRKVGMTRIFTEDGESIPVTVLDVSNNRV 49
>UniRef50_Q0CHL1 Cluster: 60S ribosomal protein L9, mitochondrial;
n=11; Eukaryota|Rep: 60S ribosomal protein L9,
mitochondrial - Aspergillus terreus (strain NIH 2624)
Length = 335
Score = 36.7 bits (81), Expect = 0.64
Identities = 23/56 (41%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +3
Query: 600 YGCILVGAENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPESA-LPNGTPLYAT 764
Y + VGA PS VTK G F + G+ PKRH+ F V E+ LP G + A+
Sbjct: 159 YYAVQVGAGWKHPSNVTKSLLGHFSAHGVSPKRHVFEFRVRDEAGLLPVGRDIPAS 214
>UniRef50_Q2JFH6 Cluster: 50S ribosomal protein L3; n=53;
Bacteria|Rep: 50S ribosomal protein L3 - Frankia sp.
(strain CcI3)
Length = 235
Score = 36.7 bits (81), Expect = 0.64
Identities = 20/75 (26%), Positives = 36/75 (48%)
Frame = +3
Query: 480 GKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKYGCILVGAENIDPSVVTKDY 659
G K+ T + +N V+ + + P + + VK + Y + +G +DP + K
Sbjct: 11 GTKLGMTQVWDANNRVVP-VTVIKAGPNVVTQVKTPDSDGYSAVQLGYGEVDPRKINKPA 69
Query: 660 CGIFDSVGMLPKRHL 704
G F + G+ P+RHL
Sbjct: 70 RGHFATSGVTPRRHL 84
>UniRef50_A6NRY7 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 442
Score = 35.5 bits (78), Expect = 1.5
Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 4/78 (5%)
Frame = +3
Query: 225 PRFRPPYWYVPKERVWTDDYLTKENKQFLEEVI--KDKLEAQT--ALEKKALTSPILNDV 392
P+FR V ++W D+ L K F EV+ D E +T L + S +L +V
Sbjct: 282 PKFRGRLHLVTNGQIWNDELLGKITAVFQPEVLISIDAWEKETYEKLRRGGSYSQLLENV 341
Query: 393 KKNVTWTPQTKRVGLIAR 446
KK VT Q K ++AR
Sbjct: 342 KKYVTLQAQGKLSAVVAR 359
>UniRef50_Q5P332 Cluster: 50S ribosomal protein L3; n=9;
Bacteria|Rep: 50S ribosomal protein L3 - Azoarcus sp.
(strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 214
Score = 35.5 bits (78), Expect = 1.5
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +3
Query: 429 VGLIARKIGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPE 548
+GL+ RK+G ++ +DG+ V T+L V +N V + PE
Sbjct: 3 LGLVGRKVGMTRIFAEDGRSVPVTVLDVSNNRVTQIKTPE 42
>UniRef50_A3HUN9 Cluster: Putative uncharacterized protein; n=1;
Algoriphagus sp. PR1|Rep: Putative uncharacterized
protein - Algoriphagus sp. PR1
Length = 812
Score = 34.7 bits (76), Expect = 2.6
Identities = 15/28 (53%), Positives = 21/28 (75%), Gaps = 1/28 (3%)
Frame = +3
Query: 345 TALEKKALTSPILNDVK-KNVTWTPQTK 425
+ LE K L+ PILNDV +++TWTP+ K
Sbjct: 150 STLEAKKLSEPILNDVMGRSLTWTPENK 177
>UniRef50_A0AFR7 Cluster: Complete genome; n=7; Listeria|Rep:
Complete genome - Listeria welshimeri serovar 6b (strain
ATCC 35897 / DSM 20650 /SLCC5334)
Length = 2027
Score = 34.3 bits (75), Expect = 3.4
Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 8/86 (9%)
Frame = +3
Query: 288 TKENKQFLEEVIKDK-----LEAQTALEKKALTSPILNDVKKN---VTWTPQTKRVGLIA 443
T N ++ +KDK L +L++K + + +KN +T T + + L+A
Sbjct: 50 TDNNVIVIKGAVKDKEYKLSLPKSISLDEKKTGKEVEYNKEKNELTITGTGEEMTLYLLA 109
Query: 444 RKIGNYPLWCKDGKKVSTTLLQVVDN 521
K+G Y L K+G KV L VV N
Sbjct: 110 SKVGTYDLELKEGDKVQAELELVVKN 135
>UniRef50_A2FG46 Cluster: Putative uncharacterized protein; n=2;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 1008
Score = 34.3 bits (75), Expect = 3.4
Identities = 11/28 (39%), Positives = 22/28 (78%)
Frame = +3
Query: 519 NHVIKYIPPEEYKPMIKSNVKWVEKQKY 602
NH+ +IPPEEY+ ++ +NV++ +K+ +
Sbjct: 241 NHISPFIPPEEYECLMPNNVEYFKKKSF 268
>UniRef50_Q3YRK9 Cluster: 50S ribosomal protein L3; n=3;
Anaplasmataceae|Rep: 50S ribosomal protein L3 -
Ehrlichia canis (strain Jake)
Length = 231
Score = 34.3 bits (75), Expect = 3.4
Identities = 13/36 (36%), Positives = 24/36 (66%)
Frame = +3
Query: 423 KRVGLIARKIGNYPLWCKDGKKVSTTLLQVVDNHVI 530
KR+GL K+G+ ++ +GK++ TLL + D+ +I
Sbjct: 3 KRIGLFLEKVGHTAIFDNEGKRIPVTLLHLRDSFII 38
>UniRef50_Q22KH8 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 1729
Score = 33.9 bits (74), Expect = 4.5
Identities = 30/111 (27%), Positives = 51/111 (45%), Gaps = 9/111 (8%)
Frame = +3
Query: 96 QLSILPKNCQNTMFPNSLKLLWGA------LQKSRFDNAACNIRGASRQPRFRPPYWYVP 257
Q SI+ KN N+ + +L LQK++ NI RQ +++P
Sbjct: 1526 QSSIISKNANNSTLASEKSILLNHSISANNLQKAKIQLFMKNINSKLRQSKYQP------ 1579
Query: 258 KERVWTDDY---LTKENKQFLEEVIKDKLEAQTALEKKALTSPILNDVKKN 401
E+++TD Y LTKE + ++E + + + ++ S L DV+KN
Sbjct: 1580 -EKMFTDRYEKQLTKEKQNQIDEQEQSQANNENKEFLDSIISEALQDVQKN 1629
>UniRef50_Q3Y0K3 Cluster: Putative uncharacterized protein; n=1;
Enterococcus faecium DO|Rep: Putative uncharacterized
protein - Enterococcus faecium DO
Length = 291
Score = 33.5 bits (73), Expect = 5.9
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Frame = +3
Query: 243 YWYVPKERVWTDDYLTKENKQFLEEVIK---DKLEAQTALEKKALTSPILNDVKKNV 404
YWY PK+ D L K+FLE++++ +L +T L ++A+ I+ KK +
Sbjct: 12 YWYRPKKIFNDDGQLLGYQKKFLEDILQKSYKQLSKKTGLSERAIKDAIVYLEKKGI 68
>UniRef50_Q4N6B8 Cluster: Putative uncharacterized protein; n=2;
Theileria|Rep: Putative uncharacterized protein -
Theileria parva
Length = 1790
Score = 33.5 bits (73), Expect = 5.9
Identities = 30/113 (26%), Positives = 53/113 (46%), Gaps = 7/113 (6%)
Frame = +3
Query: 285 LTKENKQFLEEVIKDKLEAQTALEKKALTSPILNDVKK--NVTWTPQTKR---VGLIARK 449
L + + +E+ K +E T ++ +LN V K ++ W T+R + L+ +K
Sbjct: 267 LPDDQEYSIEKDEKYSIELATYYPRRGF---VLNSVLKGEHIIWESATERCVSIRLVKKK 323
Query: 450 --IGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKY 602
+ L D ++ TTL + D++V K + EE+K K V + QKY
Sbjct: 324 GTVYGINLSLNDDRENHTTLNFIFDDYVFKNVTDEEFKEFGKKLVDPSDYQKY 376
>UniRef50_Q23EV8 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 302
Score = 33.5 bits (73), Expect = 5.9
Identities = 27/104 (25%), Positives = 53/104 (50%), Gaps = 2/104 (1%)
Frame = +3
Query: 291 KENKQFLEEVIKD--KLEAQTALEKKALTSPILNDVKKNVTWTPQTKRVGLIARKIGNYP 464
K++K+ LE+ D K + A+EK + +LN + +N +T ++R+ L ++K+ +
Sbjct: 103 KDSKEALEKADTDDNKQTQKEAIEKANKSIEMLNQMIQN--YTEISQRLTLYSQKVQSIS 160
Query: 465 LWCKDGKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQ 596
+ K S +LQ+ + K+I EE K + K E++
Sbjct: 161 ---DEVVKASDEVLQIASQKIEKFIAEEEAKKAEEEEAKKAEEE 201
>UniRef50_A7TEL2 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 1686
Score = 33.5 bits (73), Expect = 5.9
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +3
Query: 468 WCKDGKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQ 596
W G + T+ + + N +I YIP + P+I+S +K + Q
Sbjct: 506 WESQGNEKDTSYIYNISNLIISYIPERAFLPLIESKIKVKDSQ 548
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 759,398,566
Number of Sequences: 1657284
Number of extensions: 15289721
Number of successful extensions: 40582
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 39009
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40556
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 64615845515
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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