Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_F_J21
(559 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P18935 Cluster: Cytochrome b; n=3382; root|Rep: Cytochr... 132 4e-30
UniRef50_O47901 Cluster: Cytochrome b; n=17; Euteleostomi|Rep: C... 113 3e-24
UniRef50_O78784 Cluster: Cytochrome b; n=653; Coelomata|Rep: Cyt... 111 8e-24
UniRef50_Q959C6 Cluster: Cytochrome b; n=28; Coelomata|Rep: Cyto... 108 7e-23
UniRef50_Q8WCJ7 Cluster: Cytochrome b; n=2933; root|Rep: Cytochr... 107 1e-22
UniRef50_Q76F81 Cluster: Cytochrome b protein; n=12; Coelomata|R... 103 2e-21
UniRef50_A5D6K1 Cluster: Apocytochrome b; n=10; Arthropoda|Rep: ... 99 6e-20
UniRef50_P00156 Cluster: Cytochrome b; n=22548; root|Rep: Cytoch... 99 6e-20
UniRef50_Q00228 Cluster: Cytochrome b; n=19; Mytilus|Rep: Cytoch... 98 1e-19
UniRef50_A1BQ48 Cluster: Cytochrome b; n=105; Clupeocephala|Rep:... 91 1e-17
UniRef50_Q9TAE6 Cluster: Cytochrome b; n=1; Anniella geronimensi... 89 5e-17
UniRef50_P42792 Cluster: Cytochrome b; n=6041; root|Rep: Cytochr... 89 9e-17
UniRef50_Q8WF54 Cluster: Cytochrome b; n=23; Eukaryota|Rep: Cyto... 88 1e-16
UniRef50_Q94NM9 Cluster: Cytochrome b; n=4; Cricetidae|Rep: Cyto... 85 8e-16
UniRef50_P23134 Cluster: Cytochrome b; n=8595; root|Rep: Cytochr... 85 1e-15
UniRef50_Q6JCT1 Cluster: Cytochrome b; n=6; Neoptera|Rep: Cytoch... 81 2e-14
UniRef50_Q76CU5 Cluster: Cytochrome b; n=1; Galaxea fascicularis... 81 2e-14
UniRef50_Q2HJL4 Cluster: Cytochrome b; n=1; Campanulotes bidenta... 81 2e-14
UniRef50_Q950S3 Cluster: Cytochrome b; n=144; Eukaryota|Rep: Cyt... 79 5e-14
UniRef50_Q952Z5 Cluster: Cytochrome b; n=1; Partula turgida|Rep:... 79 7e-14
UniRef50_Q2I6Z5 Cluster: Cytochrome b; n=41; Fungi/Metazoa group... 79 9e-14
UniRef50_O21345 Cluster: Apocytochrome b; n=1; Euhadra herklotsi... 78 1e-13
UniRef50_A6YHJ9 Cluster: Apocytochrome b; n=2; Hexasterophora|Re... 78 2e-13
UniRef50_P51131 Cluster: Cytochrome b/c1 [Contains: Cytochrome b... 77 2e-13
UniRef50_Q8SHP6 Cluster: Apocytochrome B; n=1; Hypocrea jecorina... 74 2e-12
UniRef50_Q0Z877 Cluster: Cytochrome b; n=7; Mermithidae|Rep: Cyt... 74 3e-12
UniRef50_Q4FE09 Cluster: Cytochrome b apoenzyme; n=4; Pectinidae... 71 2e-11
UniRef50_A1C1A8 Cluster: Apocytochrome b; n=88; Magnoliophyta|Re... 69 6e-11
UniRef50_O03355 Cluster: Cytochrome b; n=14; Pancrustacea|Rep: C... 69 6e-11
UniRef50_Q5DKX9 Cluster: Cytochrome b; n=8; Pseudococcidae|Rep: ... 69 1e-10
UniRef50_Q8M370 Cluster: Cytochrome b; n=46; Neoptera|Rep: Cytoc... 68 1e-10
UniRef50_Q3YFJ1 Cluster: Cytochrome b; n=27; Coelomata|Rep: Cyto... 66 7e-10
UniRef50_P24890 Cluster: Cytochrome b; n=210; Chromadorea|Rep: C... 65 9e-10
UniRef50_Q06SB2 Cluster: Cytochrome b; n=1; Hiatella arctica|Rep... 63 5e-09
UniRef50_Q6TY86 Cluster: Cytochrome b; n=1; Xiphinema americanum... 62 6e-09
UniRef50_Q5DNB7 Cluster: Cytochrome b; n=1; Leptorhynchoides the... 62 1e-08
UniRef50_Q5NNX9 Cluster: Cytochrome b subunit; n=1; Zymomonas mo... 61 1e-08
UniRef50_O48101 Cluster: Cytochrome b; n=110; Serpentes|Rep: Cyt... 60 3e-08
UniRef50_Q4KRX9 Cluster: Cytochrome b; n=3; Crassostrea|Rep: Cyt... 59 6e-08
UniRef50_Q8LYW3 Cluster: Apocytochrome b; n=2; Polytomella|Rep: ... 58 2e-07
UniRef50_Q5FTF2 Cluster: Ubiquinol-cytochrome c reductase cytoch... 55 1e-06
UniRef50_Q5W910 Cluster: Cytochrome b; n=1; Lingula anatina|Rep:... 55 1e-06
UniRef50_P05418 Cluster: Cytochrome b; n=11; Alphaproteobacteria... 54 2e-06
UniRef50_Q74CM4 Cluster: Cytochrome b/b6; n=4; Geobacter|Rep: Cy... 54 3e-06
UniRef50_O66459 Cluster: Cytochrome b; n=2; Aquifex aeolicus|Rep... 54 3e-06
UniRef50_Q8HN51 Cluster: Cytochrome b; n=4; Chromadorea|Rep: Cyt... 54 3e-06
UniRef50_A3QRH7 Cluster: Cytochrome b; n=1; Microcotyle sebastis... 54 3e-06
UniRef50_Q9B8V1 Cluster: Cytochrome b; n=66; Platyhelminthes|Rep... 53 5e-06
UniRef50_Q9B8A8 Cluster: Apocytochrome b; n=1; Trichinella spira... 53 5e-06
UniRef50_UPI00015C5733 Cluster: hypothetical protein CKO_01262; ... 52 9e-06
UniRef50_Q02761 Cluster: Cytochrome b; n=15; Rhodobacterales|Rep... 52 1e-05
UniRef50_A6Q5D2 Cluster: Ubiquinol cytochrome c oxidoreductase, ... 49 8e-05
UniRef50_Q8M4X4 Cluster: Cytochrome b; n=76; Dinophyceae|Rep: Cy... 49 8e-05
UniRef50_Q9L597 Cluster: Subunit IV; n=2; Heliobacteriaceae|Rep:... 48 2e-04
UniRef50_P81376 Cluster: Cytochrome b; n=1; Plasmodium gallinace... 46 5e-04
UniRef50_Q8M833 Cluster: Cytochrome b; n=1; Microstomum lineare|... 46 6e-04
UniRef50_P56774 Cluster: Cytochrome b6-f complex subunit 4; n=24... 44 0.002
UniRef50_O31215 Cluster: Cytochrome b; n=132; cellular organisms... 44 0.002
UniRef50_Q9PEW9 Cluster: Ubiquinol cytochrome C oxidoreductase, ... 44 0.002
UniRef50_Q18UP2 Cluster: Putative uncharacterized protein; n=2; ... 44 0.002
UniRef50_A7QK39 Cluster: Chromosome chr16 scaffold_110, whole ge... 43 0.006
UniRef50_Q02768 Cluster: Cytochrome b; n=889; Apicomplexa|Rep: C... 42 0.007
UniRef50_Q9B305 Cluster: Cytochrome b; n=19; Eukaryota|Rep: Cyto... 42 0.013
UniRef50_Q1HTY3 Cluster: Cytochrome oxidase B; n=11; Stolidobran... 40 0.039
UniRef50_A1W459 Cluster: Cytochrome b/b6, N-terminal domain; n=6... 40 0.052
UniRef50_Q1EN74 Cluster: Cytochrome b; n=2; Heligmosomoides poly... 38 0.16
UniRef50_Q3LHR7 Cluster: Cytochrome b; n=1; Trichosporon domesti... 38 0.21
UniRef50_Q9KIW3 Cluster: Putative cytochrome b precursor; n=7; A... 37 0.37
UniRef50_Q36099 Cluster: Cytochrome b; n=12; Piroplasmida|Rep: C... 35 1.1
UniRef50_A3KPX5 Cluster: Transient receptor potential cation cha... 32 7.9
>UniRef50_P18935 Cluster: Cytochrome b; n=3382; root|Rep: Cytochrome
b - Drosophila melanogaster (Fruit fly)
Length = 378
Score = 132 bits (320), Expect = 4e-30
Identities = 67/131 (51%), Positives = 74/131 (56%)
Frame = +3
Query: 57 NPYLLGDPDNFTPANPLVTPVHIQPE*YFLFAYAILRSIPNKLGGVXXXXXXXXXXXXXP 236
+P LLGDPDNF PA PLVTP HIQPE YFLFAYAILRSIPNKLGGV P
Sbjct: 247 SPNLLGDPDNFIPATPLVTPAHIQPEWYFLFAYAILRSIPNKLGGVIALVLSIAILMILP 306
Query: 237 FTFKKKIQGIQFYPINQXXXXXXXXXXXXXXXXGARPVENPYIITGQXXXXXXXXXXXXN 416
F K +GIQFYPINQ GARPVE PY++ GQ N
Sbjct: 307 FYNLSKFRGIQFYPINQVMFWSMLVTVILLTWIGARPVEEPYVLIGQILTVVYFLYYLVN 366
Query: 417 PIIGIY*DKIL 449
P+I + D +L
Sbjct: 367 PLITKWWDNLL 377
>UniRef50_O47901 Cluster: Cytochrome b; n=17; Euteleostomi|Rep:
Cytochrome b - Leuciscus carolitertii
Length = 345
Score = 113 bits (272), Expect = 3e-24
Identities = 56/107 (52%), Positives = 62/107 (57%)
Frame = +3
Query: 57 NPYLLGDPDNFTPANPLVTPVHIQPE*YFLFAYAILRSIPNKLGGVXXXXXXXXXXXXXP 236
+P LLGDP+NFTPANPLVTP HIQPE YFLFAYAILRSIPNKLGGV P
Sbjct: 211 SPNLLGDPENFTPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVP 270
Query: 237 FTFKKKIQGIQFYPINQXXXXXXXXXXXXXXXXGARPVENPYIITGQ 377
K +G+ F P Q G PVE+PYI+ GQ
Sbjct: 271 ILHTSKQRGLTFRPATQFLFWTLVADMLILTWIGGMPVEHPYIVIGQ 317
>UniRef50_O78784 Cluster: Cytochrome b; n=653; Coelomata|Rep:
Cytochrome b - Capra sibirica (Siberian ibex)
Length = 380
Score = 111 bits (268), Expect = 8e-24
Identities = 55/106 (51%), Positives = 63/106 (59%)
Frame = +3
Query: 60 PYLLGDPDNFTPANPLVTPVHIQPE*YFLFAYAILRSIPNKLGGVXXXXXXXXXXXXXPF 239
P LLGDPDN+TPANPL TP HI+PE YFLFAYAILRSIPNKLGGV PF
Sbjct: 247 PDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALALSILILVLVPF 306
Query: 240 TFKKKIQGIQFYPINQXXXXXXXXXXXXXXXXGARPVENPYIITGQ 377
K + + F PI+Q G +PVE+PY+I GQ
Sbjct: 307 LHTSKQRSMMFRPISQCMFWVLVADLLTLTWIGGQPVEHPYVIIGQ 352
>UniRef50_Q959C6 Cluster: Cytochrome b; n=28; Coelomata|Rep:
Cytochrome b - Galaxias sp. 'teviot'
Length = 386
Score = 108 bits (260), Expect = 7e-23
Identities = 54/107 (50%), Positives = 61/107 (57%)
Frame = +3
Query: 57 NPYLLGDPDNFTPANPLVTPVHIQPE*YFLFAYAILRSIPNKLGGVXXXXXXXXXXXXXP 236
+P +LGD +NF PANPLVTP HIQPE YFLFAYAILRSIPNKLGGV P
Sbjct: 247 SPNMLGDSENFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVLALLFSILVLLVVP 306
Query: 237 FTFKKKIQGIQFYPINQXXXXXXXXXXXXXXXXGARPVENPYIITGQ 377
K +G+ F P+ Q G PVE+PYII GQ
Sbjct: 307 ILHTSKQRGLTFRPLTQFLFWALVADVLVLTWIGGMPVEHPYIIIGQ 353
>UniRef50_Q8WCJ7 Cluster: Cytochrome b; n=2933; root|Rep: Cytochrome
b - Cryptotis parva (Least shrew)
Length = 379
Score = 107 bits (258), Expect = 1e-22
Identities = 53/107 (49%), Positives = 63/107 (58%)
Frame = +3
Query: 57 NPYLLGDPDNFTPANPLVTPVHIQPE*YFLFAYAILRSIPNKLGGVXXXXXXXXXXXXXP 236
+P LLGDPDN+TPANPL TP HI+PE YFLFAYAILRSIPNKLGGV P
Sbjct: 246 SPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILAFIP 305
Query: 237 FTFKKKIQGIQFYPINQXXXXXXXXXXXXXXXXGARPVENPYIITGQ 377
K + + F P++Q G +PVE+P+II GQ
Sbjct: 306 LLHTSKQRSMMFRPLSQCLFWILVADLLTLTWIGGQPVEHPFIIIGQ 352
>UniRef50_Q76F81 Cluster: Cytochrome b protein; n=12; Coelomata|Rep:
Cytochrome b protein - Ornithodoros porcinus
Length = 365
Score = 103 bits (248), Expect = 2e-21
Identities = 49/106 (46%), Positives = 59/106 (55%)
Frame = +3
Query: 60 PYLLGDPDNFTPANPLVTPVHIQPE*YFLFAYAILRSIPNKLGGVXXXXXXXXXXXXXPF 239
PY+ DP+NF ANPL+TP HIQPE YFLFAYAILRSIPNKLGGV P
Sbjct: 244 PYMFSDPENFLEANPLITPPHIQPEWYFLFAYAILRSIPNKLGGVTALIMSIMILTLLPL 303
Query: 240 TFKKKIQGIQFYPINQXXXXXXXXXXXXXXXXGARPVENPYIITGQ 377
T K K + + P+ + GA PVE P+++ GQ
Sbjct: 304 TMKPKFKALTMSPLKKIIFWIFTNTFILLTFIGACPVEPPFMMLGQ 349
>UniRef50_A5D6K1 Cluster: Apocytochrome b; n=10; Arthropoda|Rep:
Apocytochrome b - Bothropolys sp. SP-2004
Length = 378
Score = 99.1 bits (236), Expect = 6e-20
Identities = 55/128 (42%), Positives = 63/128 (49%)
Frame = +3
Query: 60 PYLLGDPDNFTPANPLVTPVHIQPE*YFLFAYAILRSIPNKLGGVXXXXXXXXXXXXXPF 239
PY LGD +NF ANPLVTP+HI+PE YFLFAYAILRSIPNKLGGV F
Sbjct: 249 PYDLGDSENFIFANPLVTPIHIKPEWYFLFAYAILRSIPNKLGGVIALIMSILILLTLSF 308
Query: 240 TFKKKIQGIQFYPINQXXXXXXXXXXXXXXXXGARPVENPYIITGQXXXXXXXXXXXXNP 419
+ K+ I YP+N+ GA PVE P GQ P
Sbjct: 309 SVKRNILSSAAYPMNKVLFWFLVMTVFILTWIGASPVEPPLEGIGQIFTVLYFLLYLFIP 368
Query: 420 IIGIY*DK 443
+ Y DK
Sbjct: 369 LASTYMDK 376
>UniRef50_P00156 Cluster: Cytochrome b; n=22548; root|Rep:
Cytochrome b - Homo sapiens (Human)
Length = 380
Score = 99.1 bits (236), Expect = 6e-20
Identities = 49/107 (45%), Positives = 58/107 (54%)
Frame = +3
Query: 57 NPYLLGDPDNFTPANPLVTPVHIQPE*YFLFAYAILRSIPNKLGGVXXXXXXXXXXXXXP 236
+P LLGDPDN+T ANPL TP HI+PE YFLFAY ILRS+PNKLGGV P
Sbjct: 246 SPDLLGDPDNYTLANPLNTPPHIKPEWYFLFAYTILRSVPNKLGGVLALLLSILILAMIP 305
Query: 237 FTFKKKIQGIQFYPINQXXXXXXXXXXXXXXXXGARPVENPYIITGQ 377
K Q + F P++Q G +PV P+ I GQ
Sbjct: 306 ILHMSKQQSMMFRPLSQSLYWLLAADLLILTWIGGQPVSYPFTIIGQ 352
>UniRef50_Q00228 Cluster: Cytochrome b; n=19; Mytilus|Rep:
Cytochrome b - Mytilus edulis (Blue mussel)
Length = 397
Score = 97.9 bits (233), Expect = 1e-19
Identities = 48/106 (45%), Positives = 59/106 (55%)
Frame = +3
Query: 57 NPYLLGDPDNFTPANPLVTPVHIQPE*YFLFAYAILRSIPNKLGGVXXXXXXXXXXXXXP 236
+P LLG+ N+ PANP+ TP+H+QPE YF+FAYAILRSIP+K GGV P
Sbjct: 261 DPELLGNHLNYWPANPMKTPIHVQPEWYFMFAYAILRSIPHKAGGVYVMFLSIVVLYLIP 320
Query: 237 FTFKKKIQGIQFYPINQXXXXXXXXXXXXXXXXGARPVENPYIITG 374
K + + FYP+NQ GARPV PYII G
Sbjct: 321 TLHTGKYRSLCFYPLNQVVFWVLVGSFISLTWIGARPVREPYIILG 366
>UniRef50_A1BQ48 Cluster: Cytochrome b; n=105; Clupeocephala|Rep:
Cytochrome b - Priapella chamulae
Length = 256
Score = 91.5 bits (217), Expect = 1e-17
Identities = 46/95 (48%), Positives = 52/95 (54%)
Frame = +3
Query: 93 PANPLVTPVHIQPE*YFLFAYAILRSIPNKLGGVXXXXXXXXXXXXXPFTFKKKIQGIQF 272
PANPLVTP HI+PE YFLFAYAILRSIPNKLGGV PF K + + F
Sbjct: 135 PANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLASILVLMLIPFLHTSKQRSLTF 194
Query: 273 YPINQXXXXXXXXXXXXXXXXGARPVENPYIITGQ 377
P+ Q G PVE+P+II GQ
Sbjct: 195 RPLTQFLFWLLIADVAILTWIGGMPVEHPFIIIGQ 229
>UniRef50_Q9TAE6 Cluster: Cytochrome b; n=1; Anniella
geronimensis|Rep: Cytochrome b - Anniella geronimensis
Length = 262
Score = 89.4 bits (212), Expect = 5e-17
Identities = 44/95 (46%), Positives = 54/95 (56%)
Frame = +3
Query: 93 PANPLVTPVHIQPE*YFLFAYAILRSIPNKLGGVXXXXXXXXXXXXXPFTFKKKIQGIQF 272
PANPL+TP HI+PE YFLFAYAILRSIPNK+GGV P+ K + F
Sbjct: 148 PANPLITPPHIKPEWYFLFAYAILRSIPNKIGGVFALLSSVLILTIIPYLHTSKQLTMTF 207
Query: 273 YPINQXXXXXXXXXXXXXXXXGARPVENPYIITGQ 377
P++Q GA+PVE+P+II GQ
Sbjct: 208 RPLSQLTLWFIIINIMLLTWIGAQPVEHPFIIIGQ 242
>UniRef50_P42792 Cluster: Cytochrome b; n=6041; root|Rep: Cytochrome
b - Arabidopsis thaliana (Mouse-ear cress)
Length = 393
Score = 88.6 bits (210), Expect = 9e-17
Identities = 47/123 (38%), Positives = 57/123 (46%)
Frame = +3
Query: 60 PYLLGDPDNFTPANPLVTPVHIQPE*YFLFAYAILRSIPNKLGGVXXXXXXXXXXXXXPF 239
P +LG PDN+ PANP+ TP HI PE YFL YAILRSIP+K GGV PF
Sbjct: 254 PNVLGHPDNYIPANPMSTPPHIVPEWYFLPIYAILRSIPDKAGGVAAIALVFICLLALPF 313
Query: 240 TFKKKIQGIQFYPINQXXXXXXXXXXXXXXXXGARPVENPYIITGQXXXXXXXXXXXXNP 419
++ F PI Q G +PVE P++ GQ P
Sbjct: 314 FKSMYVRSSSFRPIYQGMFWLLLADCLLLGWIGCQPVEAPFVTIGQISSLVFFLFFAITP 373
Query: 420 IIG 428
I+G
Sbjct: 374 ILG 376
>UniRef50_Q8WF54 Cluster: Cytochrome b; n=23; Eukaryota|Rep:
Cytochrome b - Venerupis (Ruditapes) philippinarum
Length = 440
Score = 87.8 bits (208), Expect = 1e-16
Identities = 48/107 (44%), Positives = 55/107 (51%)
Frame = +3
Query: 57 NPYLLGDPDNFTPANPLVTPVHIQPE*YFLFAYAILRSIPNKLGGVXXXXXXXXXXXXXP 236
+P L DP NF ANP+ TPVHIQPE YFLFAY+ILRSIP+KLGGV P
Sbjct: 257 SPDLFLDPTNFIVANPMKTPVHIQPEWYFLFAYSILRSIPSKLGGVLALAASVVVLFLMP 316
Query: 237 FTFKKKIQGIQFYPINQXXXXXXXXXXXXXXXXGARPVENPYIITGQ 377
K GI +Q G PVE+PYII G+
Sbjct: 317 LYPKVLFSGISMNIFSQMLFFEFVGNFILLTYIGMCPVESPYIIFGK 363
>UniRef50_Q94NM9 Cluster: Cytochrome b; n=4; Cricetidae|Rep:
Cytochrome b - Lemmus lemmus (Norway lemming)
Length = 211
Score = 85.4 bits (202), Expect = 8e-16
Identities = 38/45 (84%), Positives = 41/45 (91%)
Frame = +3
Query: 60 PYLLGDPDNFTPANPLVTPVHIQPE*YFLFAYAILRSIPNKLGGV 194
P +LGDPDN+TPANPL TP HI+PE YFLFAYAILRSIPNKLGGV
Sbjct: 166 PDILGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGV 210
>UniRef50_P23134 Cluster: Cytochrome b; n=8595; root|Rep: Cytochrome
b - Rhodospirillum rubrum
Length = 405
Score = 84.6 bits (200), Expect = 1e-15
Identities = 44/124 (35%), Positives = 58/124 (46%), Gaps = 1/124 (0%)
Frame = +3
Query: 60 PYLLGDPDNFTPANPLVTPVHIQPE*YFLFAYAILRSIPNKLGGVXXXXXXXXXXXXXPF 239
P G+PDN+ PANP+VTP HI PE YFL YAILR++P+KLGGV P+
Sbjct: 262 PNFFGEPDNYIPANPMVTPTHIVPEWYFLPFYAILRAVPDKLGGVLAMFGAILILFVLPW 321
Query: 240 TFKKKIQGIQFYPINQXXXXXXXXXXXXXXXXGARPVENPYI-ITGQXXXXXXXXXXXXN 416
K++ F P+ + GA P E PY+ IT
Sbjct: 322 LDTSKVRSATFRPVFKGFFWVFLADCLLLGYLGAMPAEEPYVTITQLATIYYFLHFLVIT 381
Query: 417 PIIG 428
P++G
Sbjct: 382 PLVG 385
>UniRef50_Q6JCT1 Cluster: Cytochrome b; n=6; Neoptera|Rep:
Cytochrome b - Aleyrodes elevatus
Length = 232
Score = 81.0 bits (191), Expect = 2e-14
Identities = 41/106 (38%), Positives = 54/106 (50%)
Frame = +3
Query: 60 PYLLGDPDNFTPANPLVTPVHIQPE*YFLFAYAILRSIPNKLGGVXXXXXXXXXXXXXPF 239
P +L D +NF AN ++TP+HIQPE Y+LF+YAILRS+PNKLGGV F
Sbjct: 104 PLILVDSENFIVANSMITPLHIQPEWYYLFSYAILRSVPNKLGGVISLFCSILILLILMF 163
Query: 240 TFKKKIQGIQFYPINQXXXXXXXXXXXXXXXXGARPVENPYIITGQ 377
K ++FYP G+ P+E P+ GQ
Sbjct: 164 -INSKFNSLKFYPFMDFMYFLFINNLFLLMWVGSCPIEYPFYSLGQ 208
>UniRef50_Q76CU5 Cluster: Cytochrome b; n=1; Galaxea
fascicularis|Rep: Cytochrome b - Galaxea fascicularis
Length = 137
Score = 80.6 bits (190), Expect = 2e-14
Identities = 46/121 (38%), Positives = 58/121 (47%), Gaps = 1/121 (0%)
Frame = +3
Query: 96 ANPLVTPVHIQPE*YFLFAYAILRSIPNKLGGVXXXXXXXXXXXXXPFTFKKKIQGIQFY 275
AN LVTPVHIQPE YFLFAYAILRSIPNK GGV P + ++G+ F
Sbjct: 8 ANSLVTPVHIQPEWYFLFAYAILRSIPNKFGGVVSMFFSILILFFFPLFHRSWLRGLPFR 67
Query: 276 PINQXXXXXXXXXXXXXXXXGARPVENPYIITGQ-XXXXXXXXXXXXNPIIGIY*DKILF 452
P + G+ VE P+I+ GQ P++G + +LF
Sbjct: 68 PFGRMAFWSFIVNFILLTWVGSLVVEEPFILLGQLVALYYFFYFLILIPLLGEIENYVLF 127
Query: 453 N 455
N
Sbjct: 128 N 128
>UniRef50_Q2HJL4 Cluster: Cytochrome b; n=1; Campanulotes bidentatus
compar|Rep: Cytochrome b - Campanulotes bidentatus
compar (small pigeon louse)
Length = 374
Score = 80.6 bits (190), Expect = 2e-14
Identities = 44/104 (42%), Positives = 53/104 (50%)
Frame = +3
Query: 66 LLGDPDNFTPANPLVTPVHIQPE*YFLFAYAILRSIPNKLGGVXXXXXXXXXXXXXPFTF 245
+L DPDNF PANP+ TP HIQPE YFLFAY ILRS+P+KLGGV PF
Sbjct: 254 VLMDPDNFIPANPMSTPPHIQPEWYFLFAYTILRSVPSKLGGVVALVFSILFLVFLPFIS 313
Query: 246 KKKIQGIQFYPINQXXXXXXXXXXXXXXXXGARPVENPYIITGQ 377
K I+ + G+ PVE PY + G+
Sbjct: 314 LSKSLKIRTGWEYKFLVVVLFVVFFLLTWIGSMPVEYPYELVGK 357
>UniRef50_Q950S3 Cluster: Cytochrome b; n=144; Eukaryota|Rep:
Cytochrome b - Spizellomyces punctatus
Length = 396
Score = 79.4 bits (187), Expect = 5e-14
Identities = 42/106 (39%), Positives = 52/106 (49%)
Frame = +3
Query: 60 PYLLGDPDNFTPANPLVTPVHIQPE*YFLFAYAILRSIPNKLGGVXXXXXXXXXXXXXPF 239
PY LG PDN PANPLVTP I PE YFL YAILR+IP+KLGGV
Sbjct: 248 PYYLGHPDNSIPANPLVTPHSIVPEWYFLPFYAILRAIPSKLGGVIAMFGALLILFPLAL 307
Query: 240 TFKKKIQGIQFYPINQXXXXXXXXXXXXXXXXGARPVENPYIITGQ 377
++ ++ P+ GA+P+ PYI+ GQ
Sbjct: 308 IHTNNVRSNRYRPLLNLLFWIFVFNFFVLLWVGAKPIAQPYILIGQ 353
>UniRef50_Q952Z5 Cluster: Cytochrome b; n=1; Partula turgida|Rep:
Cytochrome b - Partula turgida
Length = 211
Score = 79.0 bits (186), Expect = 7e-14
Identities = 41/76 (53%), Positives = 44/76 (57%)
Frame = +3
Query: 60 PYLLGDPDNFTPANPLVTPVHIQPE*YFLFAYAILRSIPNKLGGVXXXXXXXXXXXXXPF 239
PYLL DP+N AN +VTPVHIQPE YFLFAYAILRSIP+KLGG P
Sbjct: 87 PYLLSDPENLINANSMVTPVHIQPEWYFLFAYAILRSIPSKLGGDLALAMSIFILYLMPL 146
Query: 240 TFKKKIQGIQFYPINQ 287
KK F I Q
Sbjct: 147 GMVKKSVPTSFNVIYQ 162
>UniRef50_Q2I6Z5 Cluster: Cytochrome b; n=41; Fungi/Metazoa
group|Rep: Cytochrome b - Lottia digitalis (California
fingered limpet)
Length = 389
Score = 78.6 bits (185), Expect = 9e-14
Identities = 43/106 (40%), Positives = 50/106 (47%)
Frame = +3
Query: 60 PYLLGDPDNFTPANPLVTPVHIQPE*YFLFAYAILRSIPNKLGGVXXXXXXXXXXXXXPF 239
P++LG P+NF PANPL TP HIQPE YFLFAY ILRS+PNK GV
Sbjct: 251 PHMLGAPENFFPANPLSTPAHIQPEWYFLFAYTILRSMPNKSLGVLYMGFSIFSLVFFSM 310
Query: 240 TFKKKIQGIQFYPINQXXXXXXXXXXXXXXXXGARPVENPYIITGQ 377
Q + P G +P E PYI+ GQ
Sbjct: 311 YHTSVFQSSFWTPPLGVLFALQGFVWVMLTWLGGKPAEPPYIMWGQ 356
>UniRef50_O21345 Cluster: Apocytochrome b; n=1; Euhadra
herklotsi|Rep: Apocytochrome b - Euhadra herklotsi
Length = 139
Score = 78.2 bits (184), Expect = 1e-13
Identities = 43/103 (41%), Positives = 52/103 (50%), Gaps = 1/103 (0%)
Frame = +3
Query: 60 PYLLGDPDNFTPANPLVTPVHIQPE*YFLFAYAILRSIPNKLGGVXXXXXXXXXXXXXPF 239
P + DP+NF AN +VTP+HIQPE YFLFAYAILRS+P+KLGGV P
Sbjct: 9 PNMFTDPENFLEANSMVTPIHIQPEWYFLFAYAILRSVPSKLGGVVALAASVLYLYVFPL 68
Query: 240 TFKKKIQ-GIQFYPINQXXXXXXXXXXXXXXXXGARPVENPYI 365
+ F I Q GA PVENP++
Sbjct: 69 LAAWIPKWSTPFNIIGQFIFWLYVVVFMLLTWLGACPVENPFV 111
>UniRef50_A6YHJ9 Cluster: Apocytochrome b; n=2; Hexasterophora|Rep:
Apocytochrome b - Iphiteon panicea
Length = 397
Score = 77.8 bits (183), Expect = 2e-13
Identities = 41/101 (40%), Positives = 49/101 (48%)
Frame = +3
Query: 60 PYLLGDPDNFTPANPLVTPVHIQPE*YFLFAYAILRSIPNKLGGVXXXXXXXXXXXXXPF 239
P + DP+NF ANPL+TP HIQPE Y LFAYAILRSIPNKLGGV
Sbjct: 254 PNIFTDPENFIKANPLITPTHIQPEWYLLFAYAILRSIPNKLGGVLALTSSIAVLYLIIL 313
Query: 240 TFKKKIQGIQFYPINQXXXXXXXXXXXXXXXXGARPVENPY 362
++ I+ P + G+ P E PY
Sbjct: 314 IKQQNIKTNNNRPNFKLTTWTLGIVFIILTWAGSVPAEEPY 354
>UniRef50_P51131 Cluster: Cytochrome b/c1 [Contains: Cytochrome b;
Cytochrome c1]; n=2697; root|Rep: Cytochrome b/c1
[Contains: Cytochrome b; Cytochrome c1] - Bradyrhizobium
japonicum
Length = 687
Score = 77.4 bits (182), Expect = 2e-13
Identities = 42/106 (39%), Positives = 53/106 (50%)
Frame = +3
Query: 60 PYLLGDPDNFTPANPLVTPVHIQPE*YFLFAYAILRSIPNKLGGVXXXXXXXXXXXXXPF 239
P LGD DN+ PANP VTP HI PE Y+L YAILRSIPNKL GV P+
Sbjct: 264 PNYLGDADNYIPANPGVTPPHIVPEWYYLPFYAILRSIPNKLAGVIGMFSAIIILCFLPW 323
Query: 240 TFKKKIQGIQFYPINQXXXXXXXXXXXXXXXXGARPVENPYIITGQ 377
K + ++ P+ + GA+P E Y+I G+
Sbjct: 324 LDAAKTRSSKYRPLAKQFFWIFVAVCILLGYLGAQPPEGIYVIAGR 369
>UniRef50_Q8SHP6 Cluster: Apocytochrome B; n=1; Hypocrea
jecorina|Rep: Apocytochrome B - Trichoderma reesei
(Hypocrea jecorina)
Length = 427
Score = 74.1 bits (174), Expect = 2e-12
Identities = 42/106 (39%), Positives = 54/106 (50%)
Frame = +3
Query: 60 PYLLGDPDNFTPANPLVTPVHIQPE*YFLFAYAILRSIPNKLGGVXXXXXXXXXXXXXPF 239
P +LGD +N+ ANP+ TP I PE Y L YAILRSIPNKL GV P
Sbjct: 287 PNVLGDSENYVMANPMQTPAAIVPEWYLLPFYAILRSIPNKLLGVVAMFASLLIILVLPK 346
Query: 240 TFKKKIQGIQFYPINQXXXXXXXXXXXXXXXXGARPVENPYIITGQ 377
T +G+QF P+++ GA+ VE+P+I GQ
Sbjct: 347 TDLGLTKGLQFRPLSKVMFYIFVINFLILQQLGAKHVESPFIEFGQ 392
>UniRef50_Q0Z877 Cluster: Cytochrome b; n=7; Mermithidae|Rep:
Cytochrome b - Agamermis sp. BH-2006
Length = 388
Score = 73.7 bits (173), Expect = 3e-12
Identities = 30/46 (65%), Positives = 39/46 (84%)
Frame = +3
Query: 57 NPYLLGDPDNFTPANPLVTPVHIQPE*YFLFAYAILRSIPNKLGGV 194
+PY + DP+NF +NP+++P+HIQPE YFL YAILR+IPNKLGGV
Sbjct: 239 SPYFMVDPENFIKSNPMISPIHIQPEWYFLQYYAILRAIPNKLGGV 284
>UniRef50_Q4FE09 Cluster: Cytochrome b apoenzyme; n=4;
Pectinidae|Rep: Cytochrome b apoenzyme - Placopecten
magellanicus (Sea scallop)
Length = 395
Score = 70.9 bits (166), Expect = 2e-11
Identities = 35/106 (33%), Positives = 52/106 (49%)
Frame = +3
Query: 60 PYLLGDPDNFTPANPLVTPVHIQPE*YFLFAYAILRSIPNKLGGVXXXXXXXXXXXXXPF 239
PY L D ++F P + + TP I PE YFLFAYAILRS+PNK GG+ P
Sbjct: 248 PYSLVDGESFVPCDYMDTPPSIHPEWYFLFAYAILRSVPNKAGGILLMLSSILILFILPE 307
Query: 240 TFKKKIQGIQFYPINQXXXXXXXXXXXXXXXXGARPVENPYIITGQ 377
+ ++ + +YP+ Q G++ + P+I G+
Sbjct: 308 LWYGHMESLAYYPLCQALFWLWVANFCVLTFVGSQGADEPFISAGE 353
>UniRef50_A1C1A8 Cluster: Apocytochrome b; n=88; Magnoliophyta|Rep:
Apocytochrome b - Doryphora sassafras
Length = 347
Score = 69.3 bits (162), Expect = 6e-11
Identities = 38/102 (37%), Positives = 46/102 (45%)
Frame = +3
Query: 72 GDPDNFTPANPLVTPVHIQPE*YFLFAYAILRSIPNKLGGVXXXXXXXXXXXXXPFTFKK 251
G PDN N TP HI PE YFL +AILRSIP+K GGV PF
Sbjct: 244 GHPDNXXXXNXXPTPPHIVPEWYFLPIHAILRSIPDKSGGVAAIAPVSISLLALPFFKSM 303
Query: 252 KIQGIQFYPINQXXXXXXXXXXXXXXXXGARPVENPYIITGQ 377
++ F PI+Q G +PVE P++ GQ
Sbjct: 304 YVRSSSFRPIHQGIFWLLLADRLLLGWIGCQPVEAPFVTIGQ 345
>UniRef50_O03355 Cluster: Cytochrome b; n=14; Pancrustacea|Rep:
Cytochrome b - Lutzomyia whitmani
Length = 97
Score = 69.3 bits (162), Expect = 6e-11
Identities = 38/97 (39%), Positives = 43/97 (44%)
Frame = +3
Query: 165 RSIPNKLGGVXXXXXXXXXXXXXPFTFKKKIQGIQFYPINQXXXXXXXXXXXXXXXXGAR 344
RSIPNKLGGV P K QG+QFYPINQ GAR
Sbjct: 1 RSIPNKLGGVIALVMSIAILFFLPILHMSKNQGLQFYPINQILFWYMLIIVILLTWIGAR 60
Query: 345 PVENPYIITGQXXXXXXXXXXXXNPIIGIY*DKILFN 455
PVE+PYI+TGQ NP++ D L N
Sbjct: 61 PVEDPYILTGQLLTVIYFLYYIINPMVSKIWDSYLAN 97
>UniRef50_Q5DKX9 Cluster: Cytochrome b; n=8; Pseudococcidae|Rep:
Cytochrome b - Antonina pretiosa
Length = 211
Score = 68.5 bits (160), Expect = 1e-10
Identities = 37/101 (36%), Positives = 47/101 (46%)
Frame = +3
Query: 60 PYLLGDPDNFTPANPLVTPVHIQPE*YFLFAYAILRSIPNKLGGVXXXXXXXXXXXXXPF 239
P LL + DNF N +TP HI+PE YFLF Y+ILRSI NKL G+ PF
Sbjct: 80 PMLLNNFDNFNEMNYFITPNHIEPEWYFLFFYSILRSINNKLSGLMLMFSSMMFFMIFPF 139
Query: 240 TFKKKIQGIQFYPINQXXXXXXXXXXXXXXXXGARPVENPY 362
F Q +F +N G++ +E PY
Sbjct: 140 MFNLNKQNNKFNYLNNYMNIMFYLIIINITILGSKMIEYPY 180
>UniRef50_Q8M370 Cluster: Cytochrome b; n=46; Neoptera|Rep:
Cytochrome b - Procladius villosimanus
Length = 233
Score = 68.1 bits (159), Expect = 1e-10
Identities = 64/131 (48%), Positives = 72/131 (54%)
Frame = +3
Query: 57 NPYLLGDPDNFTPANPLVTPVHIQPE*YFLFAYAILRSIPNKLGGVXXXXXXXXXXXXXP 236
+PY +GDPDNF PANPLVTP HIQPE YFLFAY
Sbjct: 102 SPYGMGDPDNFIPANPLVTPPHIQPEWYFLFAYXXXXXXXXXXXXXXXXXXXXXXXXXXX 161
Query: 237 FTFKKKIQGIQFYPINQXXXXXXXXXXXXXXXXGARPVENPYIITGQXXXXXXXXXXXXN 416
GAR VE+PYI+TGQ +
Sbjct: 162 XXXXXXXXXXXXXXXXXXLFWFMVSXXXXXXXXGARSVEDPYILTGQILTILYFSYYIID 221
Query: 417 PIIGIY*DKIL 449
PI+ + D +L
Sbjct: 222 PILTKWWDNLL 232
>UniRef50_Q3YFJ1 Cluster: Cytochrome b; n=27; Coelomata|Rep:
Cytochrome b - Laonastes aenigmamus (Laotian rock rat)
Length = 378
Score = 65.7 bits (153), Expect = 7e-10
Identities = 34/80 (42%), Positives = 41/80 (51%)
Frame = +3
Query: 138 YFLFAYAILRSIPNKLGGVXXXXXXXXXXXXXPFTFKKKIQGIQFYPINQXXXXXXXXXX 317
YFLFAYAILRSIPNKLGGV P T K + + F P++Q
Sbjct: 273 YFLFAYAILRSIPNKLGGVLALVSSILILFITPLTHCSKQRTMMFRPLSQCLFWLFTANL 332
Query: 318 XXXXXXGARPVENPYIITGQ 377
G +PVE+PYII G+
Sbjct: 333 LLLTWIGGQPVEHPYIIIGR 352
>UniRef50_P24890 Cluster: Cytochrome b; n=210; Chromadorea|Rep:
Cytochrome b - Caenorhabditis elegans
Length = 370
Score = 65.3 bits (152), Expect = 9e-10
Identities = 29/45 (64%), Positives = 37/45 (82%)
Frame = +3
Query: 60 PYLLGDPDNFTPANPLVTPVHIQPE*YFLFAYAILRSIPNKLGGV 194
P+ LGD + F A+P+++PVHI PE YFLFAYAILR+IPNK+ GV
Sbjct: 243 PFNLGDAEMFIEADPMMSPVHIVPEWYFLFAYAILRAIPNKVLGV 287
>UniRef50_Q06SB2 Cluster: Cytochrome b; n=1; Hiatella arctica|Rep:
Cytochrome b - Hiatella arctica
Length = 384
Score = 62.9 bits (146), Expect = 5e-09
Identities = 28/44 (63%), Positives = 33/44 (75%)
Frame = +3
Query: 63 YLLGDPDNFTPANPLVTPVHIQPE*YFLFAYAILRSIPNKLGGV 194
+L DP N ANP+ TPVHIQPE YFLFAY+ILR + +K GGV
Sbjct: 249 WLFQDPTNSIMANPMYTPVHIQPEWYFLFAYSILRCVDSKTGGV 292
>UniRef50_Q6TY86 Cluster: Cytochrome b; n=1; Xiphinema
americanum|Rep: Cytochrome b - Xiphinema americanum
Length = 366
Score = 62.5 bits (145), Expect = 6e-09
Identities = 28/45 (62%), Positives = 34/45 (75%)
Frame = +3
Query: 60 PYLLGDPDNFTPANPLVTPVHIQPE*YFLFAYAILRSIPNKLGGV 194
P L DP NF PA+ +PVHIQPE YFL YA+LR+IPNK+GG+
Sbjct: 239 PDLFSDPVNFLPADLSSSPVHIQPEWYFLHFYAVLRAIPNKVGGL 283
>UniRef50_Q5DNB7 Cluster: Cytochrome b; n=1; Leptorhynchoides
thecatus|Rep: Cytochrome b - Leptorhynchoides thecatus
Length = 372
Score = 61.7 bits (143), Expect = 1e-08
Identities = 29/45 (64%), Positives = 33/45 (73%)
Frame = +3
Query: 60 PYLLGDPDNFTPANPLVTPVHIQPE*YFLFAYAILRSIPNKLGGV 194
PYLL D NF N ++TP HI+PE YFLF Y ILRS P+KLGGV
Sbjct: 243 PYLLLDAINFEEINFMMTPSHIKPEWYFLFIYCILRSTPSKLGGV 287
>UniRef50_Q5NNX9 Cluster: Cytochrome b subunit; n=1; Zymomonas
mobilis|Rep: Cytochrome b subunit - Zymomonas mobilis
Length = 418
Score = 61.3 bits (142), Expect = 1e-08
Identities = 37/113 (32%), Positives = 50/113 (44%), Gaps = 7/113 (6%)
Frame = +3
Query: 60 PYLLGDPDNFTPANPLVTPVHIQPE*YFLFAYAILRS-------IPNKLGGVXXXXXXXX 218
P + DPDN+ PANP TP HI+PE YF YA+LRS IP KL GV
Sbjct: 266 PNVFTDPDNYIPANPFSTPAHIKPEWYFWPFYAVLRSFTVNFMGIPAKLWGVLGMGLSVL 325
Query: 219 XXXXXPFTFKKKIQGIQFYPINQXXXXXXXXXXXXXXXXGARPVENPYIITGQ 377
P+ ++ ++ P+ + G +P E P+I GQ
Sbjct: 326 VWGLLPWLDNSPVRSGRYRPVFRCFFLLFLADILLLGFCGKQPAEEPWIRLGQ 378
>UniRef50_O48101 Cluster: Cytochrome b; n=110; Serpentes|Rep:
Cytochrome b - Micrurus fulvius microgalbineus (Mexican
coral snake)
Length = 371
Score = 60.1 bits (139), Expect = 3e-08
Identities = 36/131 (27%), Positives = 48/131 (36%)
Frame = +3
Query: 57 NPYLLGDPDNFTPANPLVTPVHIQPE*YFLFAYAILRSIPNKLGGVXXXXXXXXXXXXXP 236
+P LL DP+ T NP Y +LRSIPNKLGG P
Sbjct: 238 SPDLLXDPEKLTKPNPXXXXXXXXXXXXXXXXYGLLRSIPNKLGGTLALLMSILILTLPP 297
Query: 237 FTFKKKIQGIQFYPINQXXXXXXXXXXXXXXXXGARPVENPYIITGQXXXXXXXXXXXXN 416
FT I+ + F P++Q +PVE P+I Q N
Sbjct: 298 FTHTSYIRPMTFRPLSQTLFWTLIATFVMITWTATKPVEPPFITISQLTSIFYFSFFIMN 357
Query: 417 PIIGIY*DKIL 449
P++ KI+
Sbjct: 358 PLLSWTEHKIM 368
>UniRef50_Q4KRX9 Cluster: Cytochrome b; n=3; Crassostrea|Rep:
Cytochrome b - Crassostrea virginica (Eastern oyster)
Length = 403
Score = 59.3 bits (137), Expect = 6e-08
Identities = 33/102 (32%), Positives = 48/102 (47%), Gaps = 1/102 (0%)
Frame = +3
Query: 75 DPDNFTPANPLVTPVHIQPE*YFLFAYAILRSIPNKLGGVXXXXXXXXXXXXXPFTFK-K 251
DP + P N + TP I+PE YFL+AYAILRSIP+K GGV P K +
Sbjct: 253 DPLQWQPINKMKTPAVIKPEWYFLYAYAILRSIPHKAGGVAMMFLAIVGVAIMPLLSKTE 312
Query: 252 KIQGIQFYPINQXXXXXXXXXXXXXXXXGARPVENPYIITGQ 377
+ Q ++ P+ + GA+ +++ GQ
Sbjct: 313 QYQSMKASPVGRWIFFIWAANFCFLTIIGAQEPSGGWVLAGQ 354
>UniRef50_Q8LYW3 Cluster: Apocytochrome b; n=2; Polytomella|Rep:
Apocytochrome b - Polytomella parva
Length = 370
Score = 57.6 bits (133), Expect = 2e-07
Identities = 30/67 (44%), Positives = 35/67 (52%)
Frame = +3
Query: 60 PYLLGDPDNFTPANPLVTPVHIQPE*YFLFAYAILRSIPNKLGGVXXXXXXXXXXXXXPF 239
P L DN+ PANP TP HI PE YFL YAILRSIP+K G+ PF
Sbjct: 247 PEALNHSDNYIPANPYSTPAHIVPEWYFLPVYAILRSIPDKGIGILAVLLFFIGLGLQPF 306
Query: 240 TFKKKIQ 260
+ K +
Sbjct: 307 LSQGKAE 313
>UniRef50_Q5FTF2 Cluster: Ubiquinol-cytochrome c reductase
cytochrome b subunit; n=1; Gluconobacter oxydans|Rep:
Ubiquinol-cytochrome c reductase cytochrome b subunit -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 392
Score = 54.8 bits (126), Expect = 1e-06
Identities = 28/67 (41%), Positives = 38/67 (56%)
Frame = +3
Query: 60 PYLLGDPDNFTPANPLVTPVHIQPE*YFLFAYAILRSIPNKLGGVXXXXXXXXXXXXXPF 239
P LL DN+ ANPLVTP I+PE YF YAILR++P++LGG+ P+
Sbjct: 263 PDLLTLADNYIQANPLVTPRDIRPEWYFAPFYAILRAVPSRLGGLLLASGSLAVLFVLPW 322
Query: 240 TFKKKIQ 260
+ I+
Sbjct: 323 LDRSTIR 329
>UniRef50_Q5W910 Cluster: Cytochrome b; n=1; Lingula anatina|Rep:
Cytochrome b - Lingula unguis
Length = 418
Score = 54.8 bits (126), Expect = 1e-06
Identities = 31/96 (32%), Positives = 42/96 (43%), Gaps = 1/96 (1%)
Frame = +3
Query: 81 DNFTPANPLVTPVHIQPE*YFLFAYAILRSIPNKLGGVXXXXXXXXXXXXXPFTFKKKIQ 260
+N+ A+P+ TP HI PE YFL+ Y ILRS P K GGV P Q
Sbjct: 254 ENWIKADPMTTPKHITPEWYFLWVYTILRSAPTKGGGVALMVLSILVLAILPLVPMTHWQ 313
Query: 261 -GIQFYPINQXXXXXXXXXXXXXXXXGARPVENPYI 365
G QF P+ + G++P P++
Sbjct: 314 GGTQFSPVGKMLFALWVSNWLIMTWVGSQPATWPFM 349
>UniRef50_P05418 Cluster: Cytochrome b; n=11;
Alphaproteobacteria|Rep: Cytochrome b - Paracoccus
denitrificans
Length = 440
Score = 54.0 bits (124), Expect = 2e-06
Identities = 25/37 (67%), Positives = 27/37 (72%)
Frame = +3
Query: 60 PYLLGDPDNFTPANPLVTPVHIQPE*YFLFAYAILRS 170
P LG PDN+ ANPLVTP HI PE YFL YAILR+
Sbjct: 271 PNYLGHPDNYIEANPLVTPAHIVPEWYFLPFYAILRA 307
>UniRef50_Q74CM4 Cluster: Cytochrome b/b6; n=4; Geobacter|Rep:
Cytochrome b/b6 - Geobacter sulfurreducens
Length = 367
Score = 53.6 bits (123), Expect = 3e-06
Identities = 26/61 (42%), Positives = 31/61 (50%)
Frame = +3
Query: 57 NPYLLGDPDNFTPANPLVTPVHIQPE*YFLFAYAILRSIPNKLGGVXXXXXXXXXXXXXP 236
NPYL P F PA+P TP HI+PE YFL Y L+ PN+L G+ P
Sbjct: 271 NPYLFFPPTAFIPADPFKTPPHIKPEWYFLANYQTLKVFPNELLGLMVQGAVMSLLALLP 330
Query: 237 F 239
F
Sbjct: 331 F 331
>UniRef50_O66459 Cluster: Cytochrome b; n=2; Aquifex aeolicus|Rep:
Cytochrome b - Aquifex aeolicus
Length = 409
Score = 53.6 bits (123), Expect = 3e-06
Identities = 25/54 (46%), Positives = 28/54 (51%)
Frame = +3
Query: 78 PDNFTPANPLVTPVHIQPE*YFLFAYAILRSIPNKLGGVXXXXXXXXXXXXXPF 239
P+NF PANPL TP HI PE Y L Y + RSIP+K G PF
Sbjct: 278 PENFEPANPLKTPAHIAPEWYLLGYYEVFRSIPSKFWGFVAFNALLLLLLLLPF 331
>UniRef50_Q8HN51 Cluster: Cytochrome b; n=4; Chromadorea|Rep:
Cytochrome b - Brugia malayi (Filarial nematode worm)
Length = 362
Score = 53.6 bits (123), Expect = 3e-06
Identities = 23/42 (54%), Positives = 30/42 (71%)
Frame = +3
Query: 69 LGDPDNFTPANPLVTPVHIQPE*YFLFAYAILRSIPNKLGGV 194
L DP F ++ + +P H+ PE YFLFA+ ILRS+PNKL GV
Sbjct: 238 LSDPMIFVESDSMASPAHVVPEWYFLFAFTILRSVPNKLFGV 279
>UniRef50_A3QRH7 Cluster: Cytochrome b; n=1; Microcotyle
sebastis|Rep: Cytochrome b - Microcotyle sebastis
Length = 386
Score = 53.6 bits (123), Expect = 3e-06
Identities = 24/46 (52%), Positives = 32/46 (69%)
Frame = +3
Query: 57 NPYLLGDPDNFTPANPLVTPVHIQPE*YFLFAYAILRSIPNKLGGV 194
+P+ +NF NPL TP +I+PE YFL YA+LRSI NK+GG+
Sbjct: 260 SPWFTSLKENFITPNPLATPXNIKPEWYFLPFYALLRSIENKIGGL 305
>UniRef50_Q9B8V1 Cluster: Cytochrome b; n=66; Platyhelminthes|Rep:
Cytochrome b - Schistosoma mekongi
Length = 372
Score = 52.8 bits (121), Expect = 5e-06
Identities = 25/46 (54%), Positives = 34/46 (73%)
Frame = +3
Query: 57 NPYLLGDPDNFTPANPLVTPVHIQPE*YFLFAYAILRSIPNKLGGV 194
+P ++ D + F ANPLVTP I+PE YFL YA+LRSI +K+GG+
Sbjct: 237 DPNIILDVEAFIVANPLVTPDSIKPEWYFLLFYAMLRSINSKVGGL 282
>UniRef50_Q9B8A8 Cluster: Apocytochrome b; n=1; Trichinella
spiralis|Rep: Apocytochrome b - Trichinella spiralis
(Trichina worm)
Length = 371
Score = 52.8 bits (121), Expect = 5e-06
Identities = 24/45 (53%), Positives = 32/45 (71%)
Frame = +3
Query: 60 PYLLGDPDNFTPANPLVTPVHIQPE*YFLFAYAILRSIPNKLGGV 194
PY DP+NF+ A+ L +P++IQPE YFL Y LRS +KLGG+
Sbjct: 243 PYWSSDPENFSYADRLSSPINIQPEWYFLPMYGFLRSSDSKLGGL 287
>UniRef50_UPI00015C5733 Cluster: hypothetical protein CKO_01262;
n=1; Citrobacter koseri ATCC BAA-895|Rep: hypothetical
protein CKO_01262 - Citrobacter koseri ATCC BAA-895
Length = 390
Score = 52.0 bits (119), Expect = 9e-06
Identities = 23/45 (51%), Positives = 30/45 (66%)
Frame = +3
Query: 60 PYLLGDPDNFTPANPLVTPVHIQPE*YFLFAYAILRSIPNKLGGV 194
P+ L DNF PA+P VTP + PE YFL ++ILR PN+L G+
Sbjct: 249 PHYLSSADNFIPADPTVTPAVVAPEWYFLPFFSILRCFPNELLGI 293
>UniRef50_Q02761 Cluster: Cytochrome b; n=15; Rhodobacterales|Rep:
Cytochrome b - Rhodobacter sphaeroides (Rhodopseudomonas
sphaeroides)
Length = 445
Score = 51.6 bits (118), Expect = 1e-05
Identities = 24/37 (64%), Positives = 26/37 (70%)
Frame = +3
Query: 60 PYLLGDPDNFTPANPLVTPVHIQPE*YFLFAYAILRS 170
P LG PDN+ ANPL TP HI PE YFL YAILR+
Sbjct: 271 PNYLGHPDNYIEANPLSTPAHIVPEWYFLPFYAILRA 307
>UniRef50_A6Q5D2 Cluster: Ubiquinol cytochrome c oxidoreductase,
cytochrome b subunit; n=26; Epsilonproteobacteria|Rep:
Ubiquinol cytochrome c oxidoreductase, cytochrome b
subunit - Nitratiruptor sp. (strain SB155-2)
Length = 465
Score = 48.8 bits (111), Expect = 8e-05
Identities = 20/31 (64%), Positives = 24/31 (77%)
Frame = +3
Query: 75 DPDNFTPANPLVTPVHIQPE*YFLFAYAILR 167
DP NF PANP+ TP HI PE YFL++Y +LR
Sbjct: 281 DPINFDPANPMKTPPHIYPEWYFLWSYEVLR 311
>UniRef50_Q8M4X4 Cluster: Cytochrome b; n=76; Dinophyceae|Rep:
Cytochrome b - Pfiesteria piscicida
Length = 374
Score = 48.8 bits (111), Expect = 8e-05
Identities = 22/41 (53%), Positives = 28/41 (68%)
Frame = +3
Query: 69 LGDPDNFTPANPLVTPVHIQPE*YFLFAYAILRSIPNKLGG 191
L PDN A L+TP+HI PE YFL YA+L+++PNK G
Sbjct: 253 LSHPDNALEACALLTPLHIVPEWYFLCQYAMLKAVPNKNAG 293
>UniRef50_Q9L597 Cluster: Subunit IV; n=2; Heliobacteriaceae|Rep:
Subunit IV - Heliobacterium gestii
Length = 133
Score = 47.6 bits (108), Expect = 2e-04
Identities = 19/34 (55%), Positives = 27/34 (79%)
Frame = +3
Query: 93 PANPLVTPVHIQPE*YFLFAYAILRSIPNKLGGV 194
PA+ LVTP+ ++PE Y+L+AY IL +PNKL G+
Sbjct: 45 PADKLVTPIGLKPEWYYLWAYVILEKVPNKLMGI 78
>UniRef50_P81376 Cluster: Cytochrome b; n=1; Plasmodium
gallinaceum|Rep: Cytochrome b - Plasmodium gallinaceum
Length = 300
Score = 46.4 bits (105), Expect = 5e-04
Identities = 21/42 (50%), Positives = 27/42 (64%)
Frame = +3
Query: 69 LGDPDNFTPANPLVTPVHIQPE*YFLFAYAILRSIPNKLGGV 194
L PDN + TP+HI PE YFL YA+L++IPNK G+
Sbjct: 189 LSHPDNAITVDRYATPLHIVPEWYFLPFYAMLKTIPNKTAGL 230
>UniRef50_Q8M833 Cluster: Cytochrome b; n=1; Microstomum
lineare|Rep: Cytochrome b - Microstomum lineare
Length = 234
Score = 46.0 bits (104), Expect = 6e-04
Identities = 24/45 (53%), Positives = 27/45 (60%)
Frame = +3
Query: 60 PYLLGDPDNFTPANPLVTPVHIQPE*YFLFAYAILRSIPNKLGGV 194
PYL D NF A+ TP HI+PE YFL YAILR+ K GV
Sbjct: 105 PYLFCDAANFMEASFSETPEHIKPEWYFLPFYAILRAFATKSSGV 149
>UniRef50_P56774 Cluster: Cytochrome b6-f complex subunit 4; n=247;
cellular organisms|Rep: Cytochrome b6-f complex subunit
4 - Arabidopsis thaliana (Mouse-ear cress)
Length = 160
Score = 44.4 bits (100), Expect = 0.002
Identities = 21/49 (42%), Positives = 26/49 (53%)
Frame = +3
Query: 93 PANPLVTPVHIQPE*YFLFAYAILRSIPNKLGGVXXXXXXXXXXXXXPF 239
PA+P TP+ I PE YF + ILR++PNKL GV PF
Sbjct: 65 PADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPF 113
>UniRef50_O31215 Cluster: Cytochrome b; n=132; cellular
organisms|Rep: Cytochrome b - Chromatium vinosum
(Allochromatium vinosum)
Length = 411
Score = 44.4 bits (100), Expect = 0.002
Identities = 28/103 (27%), Positives = 43/103 (41%), Gaps = 5/103 (4%)
Frame = +3
Query: 84 NFTPANPLVTPVHIQPE*YFLFAYAILRSIPNKLG----GVXXXXXXXXXXXXXPFTFKK 251
NF PANP+ TP HI P YF YA+LR++P G GV P+ +
Sbjct: 281 NFQPANPMQTPAHIAPVWYFTPFYAMLRAVPPMYGSQFPGVVVMFAAILILFVLPWLDRS 340
Query: 252 KIQGIQFY-PINQXXXXXXXXXXXXXXXXGARPVENPYIITGQ 377
++ +++ PI + G +P + Y + Q
Sbjct: 341 PVKSMRYKGPIFKWATGIFVVSFVALAWLGIQPASDFYTLLSQ 383
>UniRef50_Q9PEW9 Cluster: Ubiquinol cytochrome C oxidoreductase,
cytochrome B subunit; n=20; cellular organisms|Rep:
Ubiquinol cytochrome C oxidoreductase, cytochrome B
subunit - Xylella fastidiosa
Length = 420
Score = 44.0 bits (99), Expect = 0.002
Identities = 22/63 (34%), Positives = 32/63 (50%)
Frame = +3
Query: 84 NFTPANPLVTPVHIQPE*YFLFAYAILRSIPNKLGGVXXXXXXXXXXXXXPFTFKKKIQG 263
NF ANPL+TP ++P YF YA+LR +P K GV P+ + K+
Sbjct: 288 NFVEANPLMTPEDMKPVWYFAPYYAMLRLVPGKSVGVLVMFSAIAILFLVPWLDRGKVYS 347
Query: 264 IQF 272
I++
Sbjct: 348 IRY 350
>UniRef50_Q18UP2 Cluster: Putative uncharacterized protein; n=2;
Desulfitobacterium hafniense|Rep: Putative
uncharacterized protein - Desulfitobacterium hafniense
(strain DCB-2)
Length = 131
Score = 44.0 bits (99), Expect = 0.002
Identities = 15/32 (46%), Positives = 25/32 (78%)
Frame = +3
Query: 93 PANPLVTPVHIQPE*YFLFAYAILRSIPNKLG 188
PANP++TP HI+P+ YF++ + +L+ +P LG
Sbjct: 48 PANPVMTPAHIEPDWYFMWLFGLLKIVPQLLG 79
>UniRef50_A7QK39 Cluster: Chromosome chr16 scaffold_110, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr16 scaffold_110, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 184
Score = 42.7 bits (96), Expect = 0.006
Identities = 20/38 (52%), Positives = 26/38 (68%)
Frame = +3
Query: 60 PYLLGDPDNFTPANPLVTPVHIQPE*YFLFAYAILRSI 173
P +LG +N+ P N ++TP HI PE YFL +AIL SI
Sbjct: 102 PNVLGHLNNYIPTNLMLTPPHIMPEWYFLPIHAILPSI 139
>UniRef50_Q02768 Cluster: Cytochrome b; n=889; Apicomplexa|Rep:
Cytochrome b - Plasmodium falciparum
Length = 376
Score = 42.3 bits (95), Expect = 0.007
Identities = 20/42 (47%), Positives = 26/42 (61%)
Frame = +3
Query: 69 LGDPDNFTPANPLVTPVHIQPE*YFLFAYAILRSIPNKLGGV 194
L PDN N VTP I PE YFL YA+L+++P+K G+
Sbjct: 240 LSHPDNAIVVNTYVTPSQIVPEWYFLPFYAMLKTVPSKPAGL 281
>UniRef50_Q9B305 Cluster: Cytochrome b; n=19; Eukaryota|Rep:
Cytochrome b - Ranina ranina
Length = 179
Score = 41.5 bits (93), Expect = 0.013
Identities = 16/17 (94%), Positives = 16/17 (94%)
Frame = +3
Query: 57 NPYLLGDPDNFTPANPL 107
NPYLLGDPDNF PANPL
Sbjct: 163 NPYLLGDPDNFVPANPL 179
>UniRef50_Q1HTY3 Cluster: Cytochrome oxidase B; n=11;
Stolidobranchia|Rep: Cytochrome oxidase B - Polycarpa
papillata
Length = 141
Score = 39.9 bits (89), Expect = 0.039
Identities = 15/23 (65%), Positives = 19/23 (82%)
Frame = +3
Query: 60 PYLLGDPDNFTPANPLVTPVHIQ 128
P + GDP+NF ANP+VTPVHI+
Sbjct: 116 PTVFGDPENFMKANPMVTPVHIK 138
>UniRef50_A1W459 Cluster: Cytochrome b/b6, N-terminal domain; n=64;
cellular organisms|Rep: Cytochrome b/b6, N-terminal
domain - Acidovorax sp. (strain JS42)
Length = 473
Score = 39.5 bits (88), Expect = 0.052
Identities = 17/35 (48%), Positives = 24/35 (68%)
Frame = +3
Query: 81 DNFTPANPLVTPVHIQPE*YFLFAYAILRSIPNKL 185
+NF PA+PL TP HI P YF Y++LR+I ++
Sbjct: 293 NNFIPADPLQTPAHIAPVWYFTPFYSMLRAITTEM 327
>UniRef50_Q1EN74 Cluster: Cytochrome b; n=2; Heligmosomoides
polygyrus|Rep: Cytochrome b - Heligmosomoides polygyrus
Length = 211
Score = 37.9 bits (84), Expect = 0.16
Identities = 14/25 (56%), Positives = 20/25 (80%)
Frame = +3
Query: 60 PYLLGDPDNFTPANPLVTPVHIQPE 134
P+ LGDP+ F A+P+++PVHI PE
Sbjct: 186 PFSLGDPEMFIEADPMMSPVHIVPE 210
>UniRef50_Q3LHR7 Cluster: Cytochrome b; n=1; Trichosporon
domesticum|Rep: Cytochrome b - Trichosporon domesticum
Length = 132
Score = 37.5 bits (83), Expect = 0.21
Identities = 17/33 (51%), Positives = 20/33 (60%)
Frame = +3
Query: 60 PYLLGDPDNFTPANPLVTPVHIQPE*YFLFAYA 158
P +G DN+ PANP+ TP I PE Y L YA
Sbjct: 100 PNAMGHSDNYIPANPMQTPPSIVPEWYLLPYYA 132
>UniRef50_Q9KIW3 Cluster: Putative cytochrome b precursor; n=7;
Acidithiobacillus ferrooxidans|Rep: Putative cytochrome
b precursor - Thiobacillus ferrooxidans
(Acidithiobacillus ferrooxidans)
Length = 402
Score = 36.7 bits (81), Expect = 0.37
Identities = 17/65 (26%), Positives = 31/65 (47%)
Frame = +3
Query: 87 FTPANPLVTPVHIQPE*YFLFAYAILRSIPNKLGGVXXXXXXXXXXXXXPFTFKKKIQGI 266
F ANP+V+ + P Y YA+LR++PNK G+ P+ + ++
Sbjct: 275 FLAANPMVSLPDVTPPWYLSPYYAMLRAVPNKYYGIAIMITSVLLPLLLPWLDRNPVRSS 334
Query: 267 QFYPI 281
++ P+
Sbjct: 335 RYRPV 339
>UniRef50_Q36099 Cluster: Cytochrome b; n=12; Piroplasmida|Rep:
Cytochrome b - Theileria parva
Length = 363
Score = 35.1 bits (77), Expect = 1.1
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = +3
Query: 75 DPDNFTPANPLVTPVHIQPE*YFLFAYAILRSIPNKLGGV 194
D DN ++ TP HI PE Y L YA L+ P K+ G+
Sbjct: 240 DNDNSILSSSENTPAHIIPEWYLLLFYATLKVFPTKVSGL 279
>UniRef50_A3KPX5 Cluster: Transient receptor potential cation
channel, subfamily A, member 1a; n=13; Euteleostomi|Rep:
Transient receptor potential cation channel, subfamily
A, member 1a - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 1125
Score = 32.3 bits (70), Expect = 7.9
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 3/57 (5%)
Frame = +2
Query: 194 NCLNY-INYNFNYLT--IYI*KKXXXXXXXXXXXXYFLNILSNYNFINMNRSPTCRK 355
NC NY I YNF +L + KK LN + N+N +N+ P C+K
Sbjct: 657 NCTNYYIEYNFRWLQHPLQNLKKTGMEKDMAYKPLSALNAMVNFNRVNLLTHPVCKK 713
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 308,323,102
Number of Sequences: 1657284
Number of extensions: 4089382
Number of successful extensions: 8247
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 7911
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8235
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 37071859483
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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