Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_J19
         (790 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    25   0.91 
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    24   1.2  
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    23   2.1  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    22   6.4  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    22   6.4  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   8.5  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 24.6 bits (51), Expect = 0.91
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = -3

Query: 608 FMMHAMITCPI*SRILKSQGIEDDKDNT*RPL 513
           F  H   T P+ S ILK  GI++  D T +PL
Sbjct: 750 FPGHGPTTAPMGSSILKRLGIDESVDYT-KPL 780


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -2

Query: 606 YDACDDHVPNLKQNP 562
           +  C DHVP +  NP
Sbjct: 700 FPTCGDHVPEINSNP 714


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
 Frame = -1

Query: 538 IRITRRGH-FALYDLCAHNLCAPAVMPSP--DITYNI 437
           I I   GH F L D   H+L +P+  P+P  D T N+
Sbjct: 252 IGIAFYGHAFTLVDASQHDLGSPSSGPAPPGDFTENM 288


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = -1

Query: 763 WNRRMGSAYKSLRSRPLPFLF 701
           W+  MGS    L   PLP LF
Sbjct: 41  WSEDMGSFSLPLDLEPLPSLF 61


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +3

Query: 582 ARDHRMHHKYSETDADPHNATRGFFFSHIGW 674
           +R+H    + +ET A   N T  F+ S  GW
Sbjct: 190 SRNHLFLVRRTETLAQILNQTVNFYNSAFGW 220


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 6/13 (46%), Positives = 7/13 (53%)
 Frame = -2

Query: 264 HHFQREHHLHPLH 226
           HH    HH+H  H
Sbjct: 322 HHHHAGHHIHAQH 334


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 194,012
Number of Sequences: 336
Number of extensions: 4506
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21376414
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)