Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_J12
         (810 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    24   1.2  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   1.6  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    23   2.9  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   6.6  

>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 24/96 (25%), Positives = 37/96 (38%)
 Frame = +3

Query: 255 GLDKRIAAFKRDGFKVDDEDAEEYVEQSESDFYKVGEVYNEHLNETLMGKYEQRHQIIKE 434
           GL   + +F R    V   +  E+V     D     E  NEHL E L   +E+  Q    
Sbjct: 430 GLKTAVGSFSRAMDVVLGTEVREFVVNYIDDLLVASETLNEHL-EHLRQVFEKLKQ--AR 486

Query: 435 KYFKQNMPNLLTWSEKEQIRHLATTQPDEWTPEKLA 542
                   N +   E + + H+ T    +  PEK++
Sbjct: 487 MTINLEKSNFIQ-KEVKFLGHILTINGIKADPEKIS 521


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
 Frame = -2

Query: 533 FWSPLVWLRCGQMSYLFFFAPSQ*IRHILFKVLLFNYLMTLFIFT-H*CFIQMFV 372
           F  PL +L C    Y F+ A      H+LF + ++++     IFT H  F   F+
Sbjct: 136 FVVPLFFLLC---IYYFYCAFIIFTVHLLFLLCIYHFFCAFIIFTMHLLFCCAFI 187


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +3

Query: 645 RNWKELKEGTLSISEDVRAHFLKFSERTIPPLNRN 749
           RN  +  +  L+ +  V+   +KFS+RT+ P  RN
Sbjct: 649 RNGVDTLQQFLTPNMRVQDVTIKFSDRTVRPKQRN 683


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 9/11 (81%), Positives = 9/11 (81%)
 Frame = +3

Query: 306 DEDAEEYVEQS 338
           D DAEEY EQS
Sbjct: 177 DNDAEEYDEQS 187


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,164
Number of Sequences: 336
Number of extensions: 3882
Number of successful extensions: 15
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22102797
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)