Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_J12
         (810 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-3802|AAF56469.1|  363|Drosophila melanogaster CG4553-PA...    91   2e-18

>AE014297-3802|AAF56469.1|  363|Drosophila melanogaster CG4553-PA
           protein.
          Length = 363

 Score = 91.1 bits (216), Expect = 2e-18
 Identities = 56/162 (34%), Positives = 84/162 (51%), Gaps = 3/162 (1%)
 Frame = +3

Query: 249 NPGLDKRIAAFKRDGFKVDDEDAEEYVEQSESDFYKVGEVYNEHLNETLMGKYEQRHQII 428
           NPGL  ++   +    K   E +E+Y +  ESDF  V + + ++  E    +   R  +I
Sbjct: 26  NPGLGYQLEQLQEHPEK-SSEASEDYADL-ESDFMDVQKTHRQYEREQQQHRDRIRQFMI 83

Query: 429 KEKYFKQ-NMPNLLTWSEKEQIRHLATTQPDEWTPEKLAESFXXXXXXXXXXXXXXXXXA 605
           K KYF+   +PNLL  +EKEQ+R L    P+EW+ E+LAESF                  
Sbjct: 84  KHKYFRDAKLPNLLLHAEKEQMRLLHERDPEEWSVERLAESFPATPDIVQKILRAKWRPR 143

Query: 606 TEQRIARHDQSVMRNWKEL--KEGTLSISEDVRAHFLKFSER 725
           + QRI  HD++V++NW+ L   +G  SI   +  H  KF+ER
Sbjct: 144 SVQRIRSHDETVIKNWQLLGTGKGDFSIPPSLLQHLQKFAER 185


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,805,430
Number of Sequences: 53049
Number of extensions: 646635
Number of successful extensions: 2108
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 2024
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2106
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3798466620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)