Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_J12
         (810 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    22   7.7  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          22   7.7  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    22   7.7  

>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 21.8 bits (44), Expect = 7.7
 Identities = 11/48 (22%), Positives = 21/48 (43%)
 Frame = -2

Query: 383 QMFVVNLTNFIKITLRLFDILFSIFVVNFEAVSFECSNSLVQTWIWSE 240
           + ++   TN+   +L   D L  + V+ F A+     N  + T  W +
Sbjct: 73  ERYLHTATNYFVTSLAFADCLVGLVVMPFSAIYEVLENRWLFTTDWCD 120


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 21.8 bits (44), Expect = 7.7
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = -3

Query: 760 FFTEFLLRGGIVLSENLRKCALTSSEMLKV 671
           F  EF+ RG I +S+   +  L +++ LK+
Sbjct: 88  FIIEFVYRGEIDVSQAELQSLLKTADQLKI 117


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.8 bits (44), Expect = 7.7
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -2

Query: 272 NSLVQTWIWSERV*PHSV 219
           N +V+TWI  +R  P+S+
Sbjct: 797 NGIVKTWIAHDRYLPNSL 814


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 211,229
Number of Sequences: 438
Number of extensions: 4214
Number of successful extensions: 17
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25731924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)