Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_F_J10
(514 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR542155-1|CAG46952.1| 94|Homo sapiens ATP5J2 protein. 54 4e-07
CR456891-1|CAG33172.1| 94|Homo sapiens ATP5J2 protein. 54 4e-07
BC003678-1|AAH03678.1| 94|Homo sapiens ATP synthase, H+ transp... 54 4e-07
AY046911-1|AAL06647.1| 88|Homo sapiens F1Fo-ATP synthase compl... 54 4e-07
AF088918-1|AAC34895.1| 94|Homo sapiens F1F0-type ATPase subuni... 54 4e-07
AK223348-1|BAD97068.1| 94|Homo sapiens ATP synthase, H+ transp... 53 5e-07
AK126613-1|BAC86612.1| 182|Homo sapiens protein ( Homo sapiens ... 30 4.1
U80759-1|AAB91450.1| 182|Homo sapiens CAGH4 alternate open read... 29 9.5
>CR542155-1|CAG46952.1| 94|Homo sapiens ATP5J2 protein.
Length = 94
Score = 53.6 bits (123), Expect = 4e-07
Identities = 23/75 (30%), Positives = 41/75 (54%)
Frame = +2
Query: 116 QLXLXXIGSWFGRRSKPPSAVAGAFSRAWWXWQHKYVQPKKVGMAPFYQLLVGSMVFFYA 295
++ L + SW R PS + GAF R ++ + +KY+ KK ++ +L ++F Y+
Sbjct: 20 EVKLGELPSWILMRDFSPSGIFGAFQRGYYRYYNKYINVKKGSISGITMVLACYVLFSYS 79
Query: 296 INYGRIKHHKNYKYH 340
+Y +KH + KYH
Sbjct: 80 FSYKHLKHERLRKYH 94
>CR456891-1|CAG33172.1| 94|Homo sapiens ATP5J2 protein.
Length = 94
Score = 53.6 bits (123), Expect = 4e-07
Identities = 23/75 (30%), Positives = 41/75 (54%)
Frame = +2
Query: 116 QLXLXXIGSWFGRRSKPPSAVAGAFSRAWWXWQHKYVQPKKVGMAPFYQLLVGSMVFFYA 295
++ L + SW R PS + GAF R ++ + +KY+ KK ++ +L ++F Y+
Sbjct: 20 EVKLGELPSWILMRDFSPSGIFGAFQRGYYRYYNKYINVKKGSISGITMVLACYVLFSYS 79
Query: 296 INYGRIKHHKNYKYH 340
+Y +KH + KYH
Sbjct: 80 FSYKHLKHERLRKYH 94
>BC003678-1|AAH03678.1| 94|Homo sapiens ATP synthase, H+
transporting, mitochondrial F0 complex, subunit F2
protein.
Length = 94
Score = 53.6 bits (123), Expect = 4e-07
Identities = 23/75 (30%), Positives = 41/75 (54%)
Frame = +2
Query: 116 QLXLXXIGSWFGRRSKPPSAVAGAFSRAWWXWQHKYVQPKKVGMAPFYQLLVGSMVFFYA 295
++ L + SW R PS + GAF R ++ + +KY+ KK ++ +L ++F Y+
Sbjct: 20 EVKLLELPSWILMRDFSPSGIFGAFQRGYYRYYNKYINVKKGSISGITMVLACYVLFSYS 79
Query: 296 INYGRIKHHKNYKYH 340
+Y +KH + KYH
Sbjct: 80 FSYKHLKHERLRKYH 94
>AY046911-1|AAL06647.1| 88|Homo sapiens F1Fo-ATP synthase complex
Fo membrane domain f subunit protein.
Length = 88
Score = 53.6 bits (123), Expect = 4e-07
Identities = 23/75 (30%), Positives = 41/75 (54%)
Frame = +2
Query: 116 QLXLXXIGSWFGRRSKPPSAVAGAFSRAWWXWQHKYVQPKKVGMAPFYQLLVGSMVFFYA 295
++ L + SW R PS + GAF R ++ + +KY+ KK ++ +L ++F Y+
Sbjct: 14 EVKLGELPSWILMRDFSPSGIFGAFQRGYYRYYNKYINVKKGSISGITMVLACYVLFSYS 73
Query: 296 INYGRIKHHKNYKYH 340
+Y +KH + KYH
Sbjct: 74 FSYKHLKHERLRKYH 88
>AF088918-1|AAC34895.1| 94|Homo sapiens F1F0-type ATPase subunit f
protein.
Length = 94
Score = 53.6 bits (123), Expect = 4e-07
Identities = 23/75 (30%), Positives = 41/75 (54%)
Frame = +2
Query: 116 QLXLXXIGSWFGRRSKPPSAVAGAFSRAWWXWQHKYVQPKKVGMAPFYQLLVGSMVFFYA 295
++ L + SW R PS + GAF R ++ + +KY+ KK ++ +L ++F Y+
Sbjct: 20 EVKLGELPSWILMRDFSPSGIFGAFQRGYYRYYNKYINVKKGSISGITMVLACYVLFSYS 79
Query: 296 INYGRIKHHKNYKYH 340
+Y +KH + KYH
Sbjct: 80 FSYKHLKHERLRKYH 94
>AK223348-1|BAD97068.1| 94|Homo sapiens ATP synthase, H+
transporting, mitochondrial F0 complex, subunit f
isoform 2a v protein.
Length = 94
Score = 53.2 bits (122), Expect = 5e-07
Identities = 23/75 (30%), Positives = 41/75 (54%)
Frame = +2
Query: 116 QLXLXXIGSWFGRRSKPPSAVAGAFSRAWWXWQHKYVQPKKVGMAPFYQLLVGSMVFFYA 295
++ L + SW R PS + GAF R ++ + +KY+ KK ++ +L ++F Y+
Sbjct: 20 EVKLGELPSWVLMRDFSPSGIFGAFQRGYYRYYNKYINVKKGSISGITMVLACYVLFSYS 79
Query: 296 INYGRIKHHKNYKYH 340
+Y +KH + KYH
Sbjct: 80 FSYKHLKHERLRKYH 94
>AK126613-1|BAC86612.1| 182|Homo sapiens protein ( Homo sapiens
cDNA FLJ44650 fis, clone BRACE2039607. ).
Length = 182
Score = 30.3 bits (65), Expect = 4.1
Identities = 11/19 (57%), Positives = 13/19 (68%), Gaps = 2/19 (10%)
Frame = +1
Query: 34 SPKVVSSCCPW--AFRSCP 84
SPK+ S CCPW R+CP
Sbjct: 24 SPKLASGCCPWPSRMRACP 42
>U80759-1|AAB91450.1| 182|Homo sapiens CAGH4 alternate open reading
frame protein.
Length = 182
Score = 29.1 bits (62), Expect = 9.5
Identities = 15/43 (34%), Positives = 17/43 (39%)
Frame = +3
Query: 168 RLPWPELSVEPGGXGNISTYNLRRLAWLHSTNYSLAAWSSSMP 296
R PW S G + AWLH + SL WS S P
Sbjct: 69 RPPWTPCSRPTRGCSTTQQPTQQPTAWLHLRSRSLQPWSPSSP 111
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,639,391
Number of Sequences: 237096
Number of extensions: 1090952
Number of successful extensions: 2294
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2187
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2294
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4820001670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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