Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_J05
         (801 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            24   4.8  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            24   4.8  
AF045250-1|AAC02700.1|  259|Anopheles gambiae serine proteinase ...    24   4.8  

>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 24.2 bits (50), Expect = 4.8
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = +3

Query: 408  HKKVMQLIERGIAKVYEDLIDSPGIDSEE 494
            H K+M  +++  A++ +D+ D P    EE
Sbjct: 1000 HGKIMDEVDKIKAQIEQDIRDQPNAPEEE 1028


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 24.2 bits (50), Expect = 4.8
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = +3

Query: 408  HKKVMQLIERGIAKVYEDLIDSPGIDSEE 494
            H K+M  +++  A++ +D+ D P    EE
Sbjct: 1001 HGKIMDEVDKIKAQIEQDIRDQPNAPEEE 1029


>AF045250-1|AAC02700.1|  259|Anopheles gambiae serine proteinase
           protein.
          Length = 259

 Score = 24.2 bits (50), Expect = 4.8
 Identities = 16/59 (27%), Positives = 25/59 (42%)
 Frame = +2

Query: 602 GWSSCSR*TGPIWFSKLQELQRCLADYENCVTLYQLWHHSYC*EGKC*PNLRACAXTLG 778
           GW S S+    I+  KL ++   L   E+C T+ ++     C  G    N+  C    G
Sbjct: 154 GWGSISKTWEDIYPDKLMKVNLILRTEEDCQTIGKIDETQICAGGY--KNVTGCTADSG 210


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 780,406
Number of Sequences: 2352
Number of extensions: 15344
Number of successful extensions: 75
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 72
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 75
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 84408009
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)