Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_F_J05
(801 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U28928-14|AAL16319.1| 197|Caenorhabditis elegans Hypothetical p... 116 3e-26
AF040661-1|AAK82922.2| 508|Caenorhabditis elegans Hypothetical ... 37 0.019
Z73896-4|CAA98057.2| 503|Caenorhabditis elegans Hypothetical pr... 33 0.18
U21323-5|AAA62550.1| 124|Caenorhabditis elegans Hypothetical pr... 33 0.18
Z67995-6|CAA91946.1| 2692|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z67737-7|CAA91543.1| 2692|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z78198-2|CAB01567.1| 296|Caenorhabditis elegans Hypothetical pr... 28 8.9
L16679-1|AAA28092.5| 2104|Caenorhabditis elegans Muscle position... 28 8.9
AL132876-1|CAB60842.2| 132|Caenorhabditis elegans Hypothetical ... 28 8.9
AL117206-11|CAB60453.3| 1237|Caenorhabditis elegans Hypothetical... 28 8.9
AF289202-1|AAK69172.1| 2104|Caenorhabditis elegans transmembrane... 28 8.9
AF025453-4|ABC48262.1| 905|Caenorhabditis elegans Hypothetical ... 28 8.9
AF025453-3|AAM98053.2| 828|Caenorhabditis elegans Hypothetical ... 28 8.9
>U28928-14|AAL16319.1| 197|Caenorhabditis elegans Hypothetical
protein C44B7.1 protein.
Length = 197
Score = 116 bits (278), Expect = 3e-26
Identities = 66/191 (34%), Positives = 106/191 (55%)
Frame = +3
Query: 228 KLMEEKDRIEHLIRGHYAVLASNNVGLKGSLVDELGYPRDDIDVYEVRHARHKIICLQND 407
+L++++D ++ I+ VL +NN + L+D GYP + IDVY VRHARH +ICL+ND
Sbjct: 9 ELLQQRDELDGKIKELMLVLETNNSTMDSPLLDAEGYPLNTIDVYAVRHARHDLICLRND 68
Query: 408 HKKVMQLIERGIAKVYEDLIDSPGIDSEEINSCLNGYPVFKKDETVNDPTFATISFVDKG 587
+ + I + +++ E+ PV + T N+P F IS V +
Sbjct: 69 RAALTEKIVVEMENENKEVSGQTATSEEK--------PVHR---TSNEP-FVKISSVVEL 116
Query: 588 SPAEEAGLRAHDELVQFGSVNYKNFKDVSQIMRIVSHSINYGITVIVRRENADLTFELVP 767
SPA+ G R D ++Q+G++++ NF D+ ++ +I S + I V V REN + E+ P
Sbjct: 117 SPADIGGFRKDDLIIQYGNLHHGNFNDMQEVAQITKQSEDKIIRVTVIRENRPVRLEICP 176
Query: 768 XPWAKPGLLGC 800
W+ PGLLGC
Sbjct: 177 KKWSGPGLLGC 187
>AF040661-1|AAK82922.2| 508|Caenorhabditis elegans Hypothetical
protein W10G11.19 protein.
Length = 508
Score = 36.7 bits (81), Expect = 0.019
Identities = 29/111 (26%), Positives = 55/111 (49%), Gaps = 3/111 (2%)
Frame = +3
Query: 420 MQLIERGIAKVYEDL-IDS-PGIDSEEINSCLNGYPVFKKDETVNDPTFATISFVDKGSP 593
++L ++ K+Y +L +DS P D+ E+ L + +F+KDET + TF ++ G
Sbjct: 93 VELFQKFADKLYTNLALDSLPIFDAGELKKSLKNFEIFEKDET--EETFPFDFWMKIGE- 149
Query: 594 AEEAGLRAHDELVQFGSV-NYKNFKDVSQIMRIVSHSINYGITVIVRRENA 743
E R D V F ++++++ +S + + S G V + EN+
Sbjct: 150 -NELKTRNRDRFVLFTRADSFEHWEAISHFLDALKRSKQIGYVVDCKNENS 199
>Z73896-4|CAA98057.2| 503|Caenorhabditis elegans Hypothetical
protein F09E8.6 protein.
Length = 503
Score = 33.5 bits (73), Expect = 0.18
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = -1
Query: 441 YLSRSVALLSCDHFVGKLSCDARVSLHKRLCHHEGILAHQL 319
Y+ R+VA C +VG+ + VSL C +GI+AH+L
Sbjct: 173 YVKRNVAF-GCSSYVGRAGGNQTVSLEVDKCFSKGIIAHEL 212
>U21323-5|AAA62550.1| 124|Caenorhabditis elegans Hypothetical
protein C45G9.7 protein.
Length = 124
Score = 33.5 bits (73), Expect = 0.18
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +3
Query: 567 ISFVDKGSPAEEAGLRAHDELVQFGSVNY 653
I+ V+ GSPA+ AGLR HD+++Q ++
Sbjct: 63 ITNVESGSPADVAGLRKHDKILQVNGADF 91
>Z67995-6|CAA91946.1| 2692|Caenorhabditis elegans Hypothetical protein
T01H10.8 protein.
Length = 2692
Score = 28.3 bits (60), Expect = 6.8
Identities = 26/119 (21%), Positives = 50/119 (42%)
Frame = +3
Query: 204 PATREFVMKLMEEKDRIEHLIRGHYAVLASNNVGLKGSLVDELGYPRDDIDVYEVRHARH 383
P + + ++ + +IE R + A N + LG PR + V ++ R
Sbjct: 1820 PRNMKRINEICDLMGKIEENERVFSRLAAVKNNYHPRKITSTLG-PRGERMVTDLTDVRT 1878
Query: 384 KIICLQNDHKKVMQLIERGIAKVYEDLIDSPGIDSEEINSCLNGYPVFKKDETVNDPTF 560
K + + ++H K + + + LI P I + N+CL+G + +T +P F
Sbjct: 1879 KDMFVMHEHTKKISIFSEMFDALNFSLIRKPSIFATLRNACLHGILIMNGIQT--NPVF 1935
>Z67737-7|CAA91543.1| 2692|Caenorhabditis elegans Hypothetical protein
T01H10.8 protein.
Length = 2692
Score = 28.3 bits (60), Expect = 6.8
Identities = 26/119 (21%), Positives = 50/119 (42%)
Frame = +3
Query: 204 PATREFVMKLMEEKDRIEHLIRGHYAVLASNNVGLKGSLVDELGYPRDDIDVYEVRHARH 383
P + + ++ + +IE R + A N + LG PR + V ++ R
Sbjct: 1820 PRNMKRINEICDLMGKIEENERVFSRLAAVKNNYHPRKITSTLG-PRGERMVTDLTDVRT 1878
Query: 384 KIICLQNDHKKVMQLIERGIAKVYEDLIDSPGIDSEEINSCLNGYPVFKKDETVNDPTF 560
K + + ++H K + + + LI P I + N+CL+G + +T +P F
Sbjct: 1879 KDMFVMHEHTKKISIFSEMFDALNFSLIRKPSIFATLRNACLHGILIMNGIQT--NPVF 1935
>Z78198-2|CAB01567.1| 296|Caenorhabditis elegans Hypothetical
protein F55C5.2 protein.
Length = 296
Score = 27.9 bits (59), Expect = 8.9
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -3
Query: 130 KSIMLDGYNYCNCKFADLIRCIDFCFENALQ 38
++++L+ N N K L IDFC EN L+
Sbjct: 101 EAVVLNPVNGVNAKIPRLNEAIDFCVENGLK 131
>L16679-1|AAA28092.5| 2104|Caenorhabditis elegans Muscle positioning
protein 4 protein.
Length = 2104
Score = 27.9 bits (59), Expect = 8.9
Identities = 20/72 (27%), Positives = 31/72 (43%)
Frame = +3
Query: 396 LQNDHKKVMQLIERGIAKVYEDLIDSPGIDSEEINSCLNGYPVFKKDETVNDPTFATISF 575
L +DHK ++ E G+A+ Y+ + E+N N P +K + S
Sbjct: 1523 LNDDHKDLVSRFESGVAQSYDKTPLKGAFVTAEVNEIEN--PESRKKSWDTGILYNFTSH 1580
Query: 576 VDKGSPAEEAGL 611
KGS AE A +
Sbjct: 1581 FVKGSVAEPASV 1592
>AL132876-1|CAB60842.2| 132|Caenorhabditis elegans Hypothetical
protein Y105E8A.1 protein.
Length = 132
Score = 27.9 bits (59), Expect = 8.9
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +3
Query: 318 LVDELGYPRDDIDVYEVRHARHKIICLQNDHKK 416
++D LG P D ID+ + HA + +N KK
Sbjct: 27 ILDGLGIPFDSIDITKPEHAEQRRFMRENASKK 59
>AL117206-11|CAB60453.3| 1237|Caenorhabditis elegans Hypothetical
protein Y67A10A.3 protein.
Length = 1237
Score = 27.9 bits (59), Expect = 8.9
Identities = 10/41 (24%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
Frame = +3
Query: 426 LIERGIAKVYE--DLIDSPGIDSEEINSCLNGYPVFKKDET 542
++ R +++VYE +++ + ++++N+ ++G PV+K T
Sbjct: 590 IVLRKMSEVYEKSEIVSAAASSADDVNNLISGVPVYKSSWT 630
>AF289202-1|AAK69172.1| 2104|Caenorhabditis elegans transmembrane
matrix receptor MUP-4 protein.
Length = 2104
Score = 27.9 bits (59), Expect = 8.9
Identities = 20/72 (27%), Positives = 31/72 (43%)
Frame = +3
Query: 396 LQNDHKKVMQLIERGIAKVYEDLIDSPGIDSEEINSCLNGYPVFKKDETVNDPTFATISF 575
L +DHK ++ E G+A+ Y+ + E+N N P +K + S
Sbjct: 1523 LNDDHKDLVSRFESGVAQSYDKTPLKGAFVTAEVNEIEN--PESRKKSWDTGILYNFTSH 1580
Query: 576 VDKGSPAEEAGL 611
KGS AE A +
Sbjct: 1581 FVKGSVAEPASV 1592
>AF025453-4|ABC48262.1| 905|Caenorhabditis elegans Hypothetical
protein C08F1.5b protein.
Length = 905
Score = 27.9 bits (59), Expect = 8.9
Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = -2
Query: 692 HNSHNLRDIFEVLVV-Y*TKLDQFIVSTKTSLFSR*TFIHKTDSSKSWIIDSLILLKD 522
HN N + V+ + L Q++V + +R F H TD S+ L+ LKD
Sbjct: 729 HNFENAESAGDSKVIRWEDMLSQYVVDDSVTFKARVVFTHITDLLPSYSFTMLLTLKD 786
>AF025453-3|AAM98053.2| 828|Caenorhabditis elegans Hypothetical
protein C08F1.5a protein.
Length = 828
Score = 27.9 bits (59), Expect = 8.9
Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = -2
Query: 692 HNSHNLRDIFEVLVV-Y*TKLDQFIVSTKTSLFSR*TFIHKTDSSKSWIIDSLILLKD 522
HN N + V+ + L Q++V + +R F H TD S+ L+ LKD
Sbjct: 652 HNFENAESAGDSKVIRWEDMLSQYVVDDSVTFKARVVFTHITDLLPSYSFTMLLTLKD 709
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,206,855
Number of Sequences: 27780
Number of extensions: 356010
Number of successful extensions: 977
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 928
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 976
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1956310428
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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