Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_I23
         (312 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    20   5.3  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    20   6.9  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    20   6.9  

>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 20.2 bits (40), Expect = 5.3
 Identities = 8/29 (27%), Positives = 16/29 (55%)
 Frame = -2

Query: 233 SVNPFIIKHGIQIRNQICNYHVLYNSYKI 147
           + N F  +HG++  NQ+  +  + N  +I
Sbjct: 176 AANFFGARHGLETLNQLIWFDEVVNELRI 204


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 19.8 bits (39), Expect = 6.9
 Identities = 7/27 (25%), Positives = 15/27 (55%)
 Frame = -3

Query: 226 ILLLSNMAYKSGIKFAIIMFYIIAIKF 146
           +L L  +   + +KF +  FY++ + F
Sbjct: 84  LLKLGQLLGLAPVKFYVQKFYVVILAF 110


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 19.8 bits (39), Expect = 6.9
 Identities = 7/27 (25%), Positives = 15/27 (55%)
 Frame = -3

Query: 226 ILLLSNMAYKSGIKFAIIMFYIIAIKF 146
           +L L  +   + +KF +  FY++ + F
Sbjct: 10  LLKLGQLLGLAPVKFYVQKFYVVILAF 36


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 47,996
Number of Sequences: 336
Number of extensions: 719
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  5730534
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)