Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_I23
         (312 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75549-3|CAA99915.1|  301|Caenorhabditis elegans Hypothetical pr...    26   6.4  
AF098501-10|AAC67405.3| 1744|Caenorhabditis elegans Mtm (myotubu...    25   8.4  

>Z75549-3|CAA99915.1|  301|Caenorhabditis elegans Hypothetical
           protein T19C4.3 protein.
          Length = 301

 Score = 25.8 bits (54), Expect = 6.4
 Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = -3

Query: 175 IMFYIIAIKFKDSNN*IKYFSNQVKYFSDF-SYYFA 71
           IMF + A  F D++   KY S +V Y S+  SY FA
Sbjct: 133 IMFVVFAFPFADTHRCFKY-STKVTYDSESDSYSFA 167


>AF098501-10|AAC67405.3| 1744|Caenorhabditis elegans Mtm
           (myotubularin) family protein 5 protein.
          Length = 1744

 Score = 25.4 bits (53), Expect = 8.4
 Identities = 12/23 (52%), Positives = 13/23 (56%)
 Frame = -3

Query: 88  FSYYFAR*LFKITYYELATCFKG 20
           F YYFA  L+   YY L T  KG
Sbjct: 339 FIYYFAELLYGYQYYILYTRIKG 361


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,369,462
Number of Sequences: 27780
Number of extensions: 61516
Number of successful extensions: 103
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 100
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 103
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 344570176
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)