Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_I22
         (789 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    25   0.91 
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    25   0.91 
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       24   1.6  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   6.4  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   6.4  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    22   6.4  

>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 24.6 bits (51), Expect = 0.91
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = +1

Query: 139 LTYLNLNQFLNLMVFVKLQLASEDYNINLNTIQTPSFYES 258
           L+Y+ L  FLN   F+  Q+    Y     T++T  ++ S
Sbjct: 285 LSYIILTSFLNNFYFIIFQVFESFYLHKATTLETVYYFIS 324


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 24.6 bits (51), Expect = 0.91
 Identities = 8/28 (28%), Positives = 14/28 (50%)
 Frame = +2

Query: 704 CPLSHYGESCSPCPHNLNNEICXGNGKC 787
           CP   YG++C    ++ ++  C   G C
Sbjct: 364 CPEGFYGKNCEFSGYDCDSNPCQNGGVC 391



 Score = 21.8 bits (44), Expect = 6.4
 Identities = 8/28 (28%), Positives = 10/28 (35%)
 Frame = +2

Query: 704 CPLSHYGESCSPCPHNLNNEICXGNGKC 787
           CPL   G +C     +     C   G C
Sbjct: 11  CPLGFSGINCQTNDEDCTETSCMNGGTC 38


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +2

Query: 254 NLKMLNNFQYLMDPNSYKYLW 316
           +++ LNN+Q +M+P S    W
Sbjct: 15  SVRTLNNYQQVMEPRSPHTAW 35


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = +2

Query: 542 EIQEGLCSELKANKDQCYSLADVAENVL 625
           ++ + L  +L  N DQC  L+   E  L
Sbjct: 293 DLPQDLSMKLSKNNDQCLDLSKTKETNL 320


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = +2

Query: 542 EIQEGLCSELKANKDQCYSLADVAENVL 625
           ++ + L  +L  N DQC  L+   E  L
Sbjct: 185 DLPQDLSMKLSKNNDQCLDLSKTKETNL 212


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = +3

Query: 288 WTPTLTNIFGCAYYLVVK*YC 350
           WT  L N+  CA     K YC
Sbjct: 94  WTRLLKNLESCAKIKKTKRYC 114


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,222
Number of Sequences: 336
Number of extensions: 4005
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21376414
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)