Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_I22
         (789 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_0673 - 18562497-18563010,18563080-18563471,18563553-185636...    30   1.8  
03_06_0082 - 31522369-31522773                                         30   1.8  
08_01_0806 - 7791882-7792219,7793553-7793649,7796593-7796733           29   3.2  
12_01_0065 - 558521-558675,558765-558835,558914-558998,559366-55...    29   5.6  
06_03_0032 - 15697530-15697669,15699215-15699437,15699823-156999...    28   7.4  
05_07_0191 - 28303642-28303952,28304044-28304149,28304926-28305654     28   7.4  
03_01_0423 + 3240224-3240394,3241464-3241628,3242322-3242339,324...    28   7.4  

>04_03_0673 -
           18562497-18563010,18563080-18563471,18563553-18563649,
           18563977-18564149,18564349-18564485,18564806-18564872
          Length = 459

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = +2

Query: 320 CLLFSCQVILCKEISTPSTDKNINVLNEC 406
           CLL  C++ L K I+ PS   N+  LN C
Sbjct: 120 CLLKECRIELAKCIANPSCAANVACLNTC 148


>03_06_0082 - 31522369-31522773
          Length = 134

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 14/35 (40%), Positives = 17/35 (48%)
 Frame = +2

Query: 680 CIQKLQNCCPLSHYGESCSPCPHNLNNEICXGNGK 784
           C  +LQ   P  H G SC     N+ N IC G G+
Sbjct: 71  CCMQLQGMIPQCHCGASCQ-MMQNMQNAICGGLGQ 104


>08_01_0806 - 7791882-7792219,7793553-7793649,7796593-7796733
          Length = 191

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 33/139 (23%), Positives = 59/139 (42%), Gaps = 12/139 (8%)
 Frame = +2

Query: 332 SCQVILCKEISTPSTDKNINVLNECQQCKVLTDSFN----YWFKKTSRGKYEGGDVAWEE 499
           S  V + + +S P      + ++ C+Q +V+  S N     WF  T+       D    E
Sbjct: 53  SACVNITRNLSLPIKTNPEHDISSCEQ-EVMDSSMNPSPLMWFDNTTHNLLRAADCYGLE 111

Query: 500 AKLKTYARSEVRL-VEIQEGLCSELKANKDQCYSLADVAENVLXNWYYSED-------HD 655
            +LK    +++ L ++++  +   L A++ QC  L     + + N    E        H 
Sbjct: 112 -RLKAICETKLCLDIDVKSVMVILLLADQHQCDMLKQACFSFIANPNTLETVTGTPEYHQ 170

Query: 656 TVNLYTWLCIQKLQNCCPL 712
             +LY  L I+ L+N C L
Sbjct: 171 FKSLYPILLIEVLENVCIL 189


>12_01_0065 -
           558521-558675,558765-558835,558914-558998,559366-559484,
           559570-559718,560116-560157,560413-560484,560788-560897,
           561446-561535,561633-561747
          Length = 335

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
 Frame = +2

Query: 524 SEVRLVEIQEG--LCSELKANKDQCYSLADVAENVLXNWYYSEDHDTVNLYT 673
           +E R+   +EG  LC+ L   ++   S A+  E+ + +   SED D  ++YT
Sbjct: 190 TEPRITSFEEGAILCNFLPLIREHLPSAAEEIESDIISLAQSEDSDVYDIYT 241


>06_03_0032 -
           15697530-15697669,15699215-15699437,15699823-15699929,
           15700047-15700224,15700393-15700455,15700474-15700602,
           15701211-15701430,15702162-15702262,15702954-15703062,
           15705169-15705290,15705473-15705515,15705848-15705903,
           15705983-15706089,15706167-15706342,15706507-15706618,
           15706711-15706759,15707184-15707276,15707452-15707571,
           15707686-15707787,15709442-15709540,15710103-15710237,
           15710421-15710499,15710747-15710822,15710904-15710993,
           15711139-15711217,15711304-15711338,15711457-15711531,
           15712628-15713375
          Length = 1221

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
 Frame = +2

Query: 560 CSELKANKDQCYSLADVAENVLXNWY--YSEDHDTVNLYTWLCIQKLQNC 703
           CS+L+A++ Q    AD   N L  W+  Y +  D V  Y  L    LQ C
Sbjct: 745 CSKLEASEQQLLCKADRLRNELLEWHEMYKKLTDEVKFYDGL--YALQRC 792


>05_07_0191 - 28303642-28303952,28304044-28304149,28304926-28305654
          Length = 381

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = +2

Query: 476 GGDVAWEEAKLKTYARSEVRLV 541
           GGDV W+EA L ++AR +  +V
Sbjct: 161 GGDVRWKEAMLASFARMDGEVV 182


>03_01_0423 + 3240224-3240394,3241464-3241628,3242322-3242339,
            3242494-3242836,3244138-3248540,3248928-3249107,
            3249108-3250892,3251055-3252173
          Length = 2727

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 16/67 (23%), Positives = 31/67 (46%)
 Frame = +2

Query: 233  YKHLVSTNLKMLNNFQYLMDPNSYKYLWLCLLFSCQVILCKEISTPSTDKNINVLNECQQ 412
            Y+ +VS+    + +   +++    K    C   S   ++ +     + DKN+ + NECQ+
Sbjct: 1764 YEEMVSSLQDKIRHMDQMLEHEQQK----CADASISTLILENSLVDARDKNLALFNECQK 1819

Query: 413  CKVLTDS 433
                TDS
Sbjct: 1820 FIQATDS 1826


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,486,680
Number of Sequences: 37544
Number of extensions: 343964
Number of successful extensions: 747
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 726
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 747
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2127163404
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)