Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_F_I22
(789 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly pro... 26 0.35
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 25 0.80
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 25 0.80
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 25 0.80
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 25 0.80
U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodops... 21 9.9
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 21 9.9
AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine beta-sy... 21 9.9
AB178034-1|BAD27112.1| 76|Apis mellifera apiceropsin protein. 21 9.9
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 21 9.9
>AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly
protein MRJP2 protein.
Length = 452
Score = 26.2 bits (55), Expect = 0.35
Identities = 10/32 (31%), Positives = 21/32 (65%)
Frame = +2
Query: 308 YLWLCLLFSCQVILCKEISTPSTDKNINVLNE 403
++ CL +CQ + +E S + +K++NV++E
Sbjct: 6 FMVACLGIACQGAIVRENSPRNLEKSLNVIHE 37
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 25.0 bits (52), Expect = 0.80
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -2
Query: 785 IYHFXYKFHCLNYVGKENRILHN 717
IY +F C+NYVG++ R +HN
Sbjct: 374 IYASLLEFVCVNYVGRK-RPMHN 395
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 25.0 bits (52), Expect = 0.80
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -2
Query: 785 IYHFXYKFHCLNYVGKENRILHN 717
IY +F C+NYVG++ R +HN
Sbjct: 343 IYASLLEFVCVNYVGRK-RPMHN 364
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 25.0 bits (52), Expect = 0.80
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -2
Query: 785 IYHFXYKFHCLNYVGKENRILHN 717
IY +F C+NYVG++ R +HN
Sbjct: 394 IYASLLEFVCVNYVGRK-RPMHN 415
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 25.0 bits (52), Expect = 0.80
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -2
Query: 785 IYHFXYKFHCLNYVGKENRILHN 717
IY +F C+NYVG++ R +HN
Sbjct: 343 IYASLLEFVCVNYVGRK-RPMHN 364
>U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodopsin
protein.
Length = 377
Score = 21.4 bits (43), Expect = 9.9
Identities = 8/30 (26%), Positives = 16/30 (53%)
Frame = +2
Query: 359 ISTPSTDKNINVLNECQQCKVLTDSFNYWF 448
+++ + +N N EC+ KV + + WF
Sbjct: 259 VASLRSSENQNTSAECKLAKVALMTISLWF 288
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 21.4 bits (43), Expect = 9.9
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = +2
Query: 32 LVSPPGTRRVSKSRKSIL 85
++ PPGTR RK ++
Sbjct: 647 IIEPPGTRFFYPDRKQVI 664
>AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine
beta-synthase protein.
Length = 504
Score = 21.4 bits (43), Expect = 9.9
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = +2
Query: 617 NVLXNWYYSEDHDTVNLYTWLCIQK 691
NV+ W +ED++++N L Q+
Sbjct: 276 NVIDKWIKTEDNESLNAARMLIRQE 300
>AB178034-1|BAD27112.1| 76|Apis mellifera apiceropsin protein.
Length = 76
Score = 21.4 bits (43), Expect = 9.9
Identities = 8/30 (26%), Positives = 16/30 (53%)
Frame = +2
Query: 359 ISTPSTDKNINVLNECQQCKVLTDSFNYWF 448
+++ + +N N EC+ KV + + WF
Sbjct: 9 VASLRSSENQNTSAECKLAKVALMTISLWF 38
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 21.4 bits (43), Expect = 9.9
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = +2
Query: 32 LVSPPGTRRVSKSRKSIL 85
++ PPGTR RK ++
Sbjct: 737 IIEPPGTRFFYPDRKQVI 754
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 206,027
Number of Sequences: 438
Number of extensions: 4075
Number of successful extensions: 28
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24882285
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -