Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_I18
         (637 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0986 - 26574083-26574952                                         30   1.8  
03_02_0149 + 5933134-5933207,5935039-5935267,5935370-5935468,593...    27   2.1  
04_01_0244 - 3194141-3195091,3195301-3195312                           29   4.1  
07_03_1601 - 28047764-28047845,28048043-28048078,28048209-280483...    28   5.4  
02_01_0041 + 279583-281622,281724-282047,282315-282443,282526-28...    28   5.4  
07_03_1600 - 28024495-28024509,28024681-28024731,28025083-280253...    28   7.1  

>06_03_0986 - 26574083-26574952
          Length = 289

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 18/73 (24%), Positives = 35/73 (47%)
 Frame = +3

Query: 342 NSNLIRVTNNIVPIKPKSVPAPAGNKMPIWEPRQPNAEKTHMQAQTSAISNPNIMQMNNI 521
           N ++++++N +VP    + P P    +P+  P  P  +   +    + +  P   +M  I
Sbjct: 179 NISVLQISNFVVPPGVLTRPRPGPGPLPLPSPPLPRMKPMAIAPTPAPVPAPT--KMVPI 236

Query: 522 PFSXSLTAPAENN 560
           P S  LT PA+ +
Sbjct: 237 PPSLPLTDPADED 249


>03_02_0149 +
           5933134-5933207,5935039-5935267,5935370-5935468,
           5935582-5935616,5935694-5935769,5936552-5936662,
           5937001-5937087,5937302-5937395,5937489-5937606,
           5938047-5938542,5939263-5939298,5940047-5940578,
           5940668-5940792
          Length = 703

 Score = 27.5 bits (58), Expect(2) = 2.1
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = +3

Query: 387 PKSVPAPAGNKMPIWEPRQPNAEKTHMQAQTSAISNP 497
           PKS+P P    MP   P+ P+ E +  + + S ++ P
Sbjct: 588 PKSMPPPPPKSMPPPPPKFPSNEMSRNEDRRSDLNKP 624



 Score = 20.6 bits (41), Expect(2) = 2.1
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +3

Query: 369 NIVPIKPKSVPAP 407
           N++P  PKS+P P
Sbjct: 550 NMLPPPPKSMPPP 562


>04_01_0244 - 3194141-3195091,3195301-3195312
          Length = 320

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 17/53 (32%), Positives = 23/53 (43%)
 Frame = +3

Query: 333 RKANSNLIRVTNNIVPIKPKSVPAPAGNKMPIWEPRQPNAEKTHMQAQTSAIS 491
           RK  +  +R+   + P  P    APA   +P   P  P     HM A  SA+S
Sbjct: 196 RKTTTAPVRI--QLAPRNPPPPAAPAAPPVPPAVPAAPAPAPVHMSAPASALS 246


>07_03_1601 -
           28047764-28047845,28048043-28048078,28048209-28048339,
           28048695-28048967,28049039-28049166,28049250-28049369,
           28049461-28049538,28049598-28049669,28049790-28049849,
           28050096-28050217,28052918-28053048,28053382-28053534,
           28053628-28053755,28053831-28053968,28054056-28054144,
           28055741-28055878,28056870-28057102
          Length = 703

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = -1

Query: 631 FS*SRKGLSCTPVILGC*SSHTGILFSAGAVKLXE 527
           F+   +  +CT + +GC  S+T IL SA  V++ +
Sbjct: 486 FNGEERIFACTGIFIGCDESNTRILTSASLVRISD 520


>02_01_0041 + 279583-281622,281724-282047,282315-282443,282526-282648,
            282768-282923,283224-283349,283426-283560,283815-283942,
            284037-284148,284233-284547,284655-284771,284871-285166,
            285252-285783,287980-288082,288808-288881,288965-289062,
            289340-289380,289977-290032,290170-290244,290377-290469,
            290602-290850,290930-291002,291681-291766,291853-291938,
            292067-292142,292280-292347,292430-292496,292570-292665,
            292741-292843,293214-293309,293396-293466
          Length = 2047

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 8/59 (13%)
 Frame = +3

Query: 378  PIKPKSVPAPAGNKMPIWEPR---QPNAEKTHMQAQTSA--ISNP---NIMQMNNIPFS 530
            P +PK+ P PA  K+   EP    +P A KT   +Q      S+P    + + NN+P S
Sbjct: 1720 PSEPKAQPEPAEPKVKETEPSRTPEPKAPKTEEASQPGGRIFSSPLARKLAEDNNVPLS 1778


>07_03_1600 -
           28024495-28024509,28024681-28024731,28025083-28025355,
           28025427-28025554,28025645-28025764,28025856-28025933,
           28025993-28026061,28026183-28026213
          Length = 254

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = -1

Query: 607 SCTPVILGC*SSHTGILFSAGAVKLXE 527
           +CT + +GC  S+T IL SA  V++ +
Sbjct: 106 ACTGIFIGCSESNTRILTSASLVRISD 132


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,060,422
Number of Sequences: 37544
Number of extensions: 279917
Number of successful extensions: 728
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 708
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 728
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1561213104
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)