Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_I18
         (637 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           29   0.16 
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    26   0.87 
AY534995-1|AAT07393.1|  461|Anopheles gambiae XK-related protein.      24   4.6  
U50479-1|AAA93478.1|  151|Anopheles gambiae protein ( Anopheles ...    23   8.1  

>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 28.7 bits (61), Expect = 0.16
 Identities = 11/17 (64%), Positives = 13/17 (76%)
 Frame = -3

Query: 149  FEGYFNLIFCIFCFXKE 99
            F G+F LIF IFC+ KE
Sbjct: 1033 FVGFFGLIFGIFCYRKE 1049


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 26.2 bits (55), Expect = 0.87
 Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 3/47 (6%)
 Frame = +3

Query: 375 VPIKPKSVPAPAGNKMPIWEPRQPNA---EKTHMQAQTSAISNPNIM 506
           +P++P+  P       P  +PR P+A   ++  M  Q   I  PN M
Sbjct: 226 MPMRPQMPPGAVPGMQPGMQPRPPSAQGMQRPPMMGQPPPIRPPNPM 272


>AY534995-1|AAT07393.1|  461|Anopheles gambiae XK-related protein.
          Length = 461

 Score = 23.8 bits (49), Expect = 4.6
 Identities = 14/35 (40%), Positives = 17/35 (48%)
 Frame = -2

Query: 501 YWDLISLRSELACVFFRHSVDEAPKSASCSQLVQE 397
           YW   SLR   AC   +H  D A +  +   LVQE
Sbjct: 190 YWH--SLRLSYACYRAKHRQDWAAQKRTYELLVQE 222


>U50479-1|AAA93478.1|  151|Anopheles gambiae protein ( Anopheles
           gambiae putativeribosomal protein S13 mRNA, complete
           cds. ).
          Length = 151

 Score = 23.0 bits (47), Expect = 8.1
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -3

Query: 470 LHVCFFGIRLTRLPNRHLVPSWCR 399
           +H    GI  + LP R  VPSW +
Sbjct: 4   MHAPGKGISKSALPYRRSVPSWLK 27


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 632,692
Number of Sequences: 2352
Number of extensions: 12011
Number of successful extensions: 33
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62305095
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)