Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_F_I18
(637 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y08766-1|CAA70019.1| 638|Homo sapiens SF1-Bo isoform protein. 31 4.5
Y08765-1|CAA70018.1| 639|Homo sapiens SF1-Hl1 isoform protein. 31 4.5
U42390-1|AAC34245.1| 2861|Homo sapiens Trio protein. 31 4.5
L49380-1|AAB04033.1| 639|Homo sapiens transcription factor ZFM1... 31 4.5
D26120-2|BAA05117.1| 623|Homo sapiens ZFM1 protein protein. 31 4.5
BC000773-1|AAH00773.1| 265|Homo sapiens Similar to zinc finger ... 31 4.5
Y18448-1|CAA77176.1| 3851|Homo sapiens Bassoon protein protein. 30 7.9
AF052224-1|AAC83555.1| 3926|Homo sapiens neuronal double zinc fi... 30 7.9
AB007894-1|BAA23707.1| 1571|Homo sapiens KIAA0434 protein. 30 7.9
>Y08766-1|CAA70019.1| 638|Homo sapiens SF1-Bo isoform protein.
Length = 638
Score = 30.7 bits (66), Expect = 4.5
Identities = 19/79 (24%), Positives = 33/79 (41%)
Frame = +3
Query: 399 PAPAGNKMPIWEPRQPNAEKTHMQAQTSAISNPNIMQMNNIPFSXSLTAPAENNMPVWEL 578
P P +P W+ +Q + + A S P Q N + + T+ ++P W+
Sbjct: 490 PPPPSGPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQQNT---TTTTTSAGTGSIPPWQQ 546
Query: 579 QQPNITGVQESPFRLQLNP 635
QQ +P ++Q NP
Sbjct: 547 QQAAAAASPGAP-QMQGNP 564
>Y08765-1|CAA70018.1| 639|Homo sapiens SF1-Hl1 isoform protein.
Length = 639
Score = 30.7 bits (66), Expect = 4.5
Identities = 19/79 (24%), Positives = 33/79 (41%)
Frame = +3
Query: 399 PAPAGNKMPIWEPRQPNAEKTHMQAQTSAISNPNIMQMNNIPFSXSLTAPAENNMPVWEL 578
P P +P W+ +Q + + A S P Q N + + T+ ++P W+
Sbjct: 490 PPPPSGPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQQNT---TTTTTSAGTGSIPPWQQ 546
Query: 579 QQPNITGVQESPFRLQLNP 635
QQ +P ++Q NP
Sbjct: 547 QQAAAAASPGAP-QMQGNP 564
>U42390-1|AAC34245.1| 2861|Homo sapiens Trio protein.
Length = 2861
Score = 30.7 bits (66), Expect = 4.5
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +3
Query: 387 PKSVPAPAGNKMPIWEPRQPNAEKTHMQAQTSAISNPNIMQM 512
P P+ + P W P QP A + + Q+ + S+ NI M
Sbjct: 2279 PPGSPSLSDTTPPCWSPLQPRARQRQTRCQSESSSSSNISTM 2320
>L49380-1|AAB04033.1| 639|Homo sapiens transcription factor ZFM1
protein.
Length = 639
Score = 30.7 bits (66), Expect = 4.5
Identities = 19/79 (24%), Positives = 33/79 (41%)
Frame = +3
Query: 399 PAPAGNKMPIWEPRQPNAEKTHMQAQTSAISNPNIMQMNNIPFSXSLTAPAENNMPVWEL 578
P P +P W+ +Q + + A S P Q N + + T+ ++P W+
Sbjct: 490 PPPPSGPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQQNT---TTTTTSAGTGSIPPWQQ 546
Query: 579 QQPNITGVQESPFRLQLNP 635
QQ +P ++Q NP
Sbjct: 547 QQAAAAASPGAP-QMQGNP 564
>D26120-2|BAA05117.1| 623|Homo sapiens ZFM1 protein protein.
Length = 623
Score = 30.7 bits (66), Expect = 4.5
Identities = 19/79 (24%), Positives = 33/79 (41%)
Frame = +3
Query: 399 PAPAGNKMPIWEPRQPNAEKTHMQAQTSAISNPNIMQMNNIPFSXSLTAPAENNMPVWEL 578
P P +P W+ +Q + + A S P Q N + + T+ ++P W+
Sbjct: 490 PPPPSGPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQQNT---TTTTTSAGTGSIPPWQQ 546
Query: 579 QQPNITGVQESPFRLQLNP 635
QQ +P ++Q NP
Sbjct: 547 QQAAAAASPGAP-QMQGNP 564
>BC000773-1|AAH00773.1| 265|Homo sapiens Similar to zinc finger
protein 162 protein.
Length = 265
Score = 30.7 bits (66), Expect = 4.5
Identities = 19/79 (24%), Positives = 33/79 (41%)
Frame = +3
Query: 399 PAPAGNKMPIWEPRQPNAEKTHMQAQTSAISNPNIMQMNNIPFSXSLTAPAENNMPVWEL 578
P P +P W+ +Q + + A S P Q N + + T+ ++P W+
Sbjct: 116 PPPPSGPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQQNT---TTTTTSAGTGSIPPWQQ 172
Query: 579 QQPNITGVQESPFRLQLNP 635
QQ +P ++Q NP
Sbjct: 173 QQAAAAASPGAP-QMQGNP 190
>Y18448-1|CAA77176.1| 3851|Homo sapiens Bassoon protein protein.
Length = 3851
Score = 29.9 bits (64), Expect = 7.9
Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = +3
Query: 399 PAPAGNKMPIWEPRQPNAEKTHMQAQTS--AISNPNIMQMNNIPFSXSLTAPA 551
P PA ++ P+ +PRQ + + T+ I++P ++ M++ P S + PA
Sbjct: 3058 PVPADSRAPLQKPRQTSLADLEQKVPTNYEVIASP-VVPMSSAPSETSYSGPA 3109
>AF052224-1|AAC83555.1| 3926|Homo sapiens neuronal double zinc finger
protein protein.
Length = 3926
Score = 29.9 bits (64), Expect = 7.9
Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = +3
Query: 399 PAPAGNKMPIWEPRQPNAEKTHMQAQTS--AISNPNIMQMNNIPFSXSLTAPA 551
P PA ++ P+ +PRQ + + T+ I++P ++ M++ P S + PA
Sbjct: 3133 PVPADSRAPLQKPRQTSLADLEQKVPTNYEVIASP-VVPMSSAPSETSYSGPA 3184
>AB007894-1|BAA23707.1| 1571|Homo sapiens KIAA0434 protein.
Length = 1571
Score = 29.9 bits (64), Expect = 7.9
Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = +3
Query: 399 PAPAGNKMPIWEPRQPNAEKTHMQAQTS--AISNPNIMQMNNIPFSXSLTAPA 551
P PA ++ P+ +PRQ + + T+ I++P ++ M++ P S + PA
Sbjct: 778 PVPADSRAPLQKPRQTSLADLEQKVPTNYEVIASP-VVPMSSAPSETSYSGPA 829
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,640,958
Number of Sequences: 237096
Number of extensions: 1665603
Number of successful extensions: 3898
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3786
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3898
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6972732040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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