Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_I18
         (637 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U12966-6|AAM48533.1|  783|Caenorhabditis elegans Hypothetical pr...    32   0.30 
AF047653-2|AAC04459.1|  388|Caenorhabditis elegans Hypothetical ...    31   0.91 
Z70306-1|CAA94322.1|  355|Caenorhabditis elegans Hypothetical pr...    30   1.2  
U97196-12|AAB52456.2|  564|Caenorhabditis elegans Hypothetical p...    29   2.8  
U40059-1|AAA81138.3|  867|Caenorhabditis elegans Hypothetical pr...    28   4.9  

>U12966-6|AAM48533.1|  783|Caenorhabditis elegans Hypothetical
           protein F54D8.6 protein.
          Length = 783

 Score = 32.3 bits (70), Expect = 0.30
 Identities = 23/84 (27%), Positives = 35/84 (41%)
 Frame = +3

Query: 351 LIRVTNNIVPIKPKSVPAPAGNKMPIWEPRQPNAEKTHMQAQTSAISNPNIMQMNNIPFS 530
           L ++  N   I P ++P P     PI  P  PNA    +    + +S P   +   IP +
Sbjct: 242 LQKIPKNPQQIAPVTIPPPVVMPPPIVIPGMPNAPA--VTEVLNLVSLPLNAKPVPIPIA 299

Query: 531 XSLTAPAENNMPVWELQQPNITGV 602
            S+ AP     P   L  PN+  +
Sbjct: 300 SSVIAPNYATAPPIALTDPNVASI 323


>AF047653-2|AAC04459.1|  388|Caenorhabditis elegans Hypothetical
           protein W02F12.3 protein.
          Length = 388

 Score = 30.7 bits (66), Expect = 0.91
 Identities = 28/124 (22%), Positives = 57/124 (45%), Gaps = 15/124 (12%)
 Frame = +3

Query: 270 RYILKNANIYGDNCDFTVMKKRKANSNLIRVTNNIVPIKPKSVPAPAGNK---MPIWEPR 440
           R +++N++I   + +F + +  +   + +  T+   P    S P PAGN+   MP   PR
Sbjct: 22  RQMIENSHIIPSS-EFNIFRSARMAGDDVPSTSGAPP-GSSSAPTPAGNQVAPMPATRPR 79

Query: 441 QPNAEKTHMQAQTSAI---------SN--PNIMQMNNIPFSXSLT-APAENNMPVWELQQ 584
           +  ++       ++ I         SN   N  +  N+P + ++T    + + PV +LQ 
Sbjct: 80  EAESQNAAQPGLSTQIWRAICPLCGSNRVSNTEENTNVPVTGNVTPRDVQTDQPVADLQS 139

Query: 585 PNIT 596
           P ++
Sbjct: 140 PPLS 143


>Z70306-1|CAA94322.1|  355|Caenorhabditis elegans Hypothetical
           protein C06G8.1 protein.
          Length = 355

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = -1

Query: 421 ILFPAGAGTLLGFIGTILFVTLMR 350
           ++FP G G+LL FI  +LF+ L R
Sbjct: 188 LIFPNGVGSLLAFIQLLLFIVLPR 211


>U97196-12|AAB52456.2|  564|Caenorhabditis elegans Hypothetical
           protein B0207.1 protein.
          Length = 564

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = +3

Query: 378 PIKPKSVPAPAGNKMPIWEPRQPNAEKTHMQAQTSAISN-PNIMQM 512
           P+K   +P P GN  P+ +P+ P  ++T  Q     + + P I QM
Sbjct: 93  PVKTPPLPRPPGNLNPVQQPQIP-VQRTPPQCPPPPVPHPPQITQM 137


>U40059-1|AAA81138.3|  867|Caenorhabditis elegans Hypothetical
           protein K03C7.1 protein.
          Length = 867

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
 Frame = +3

Query: 378 PIKPKSVPAPAGNKMPIWE--PRQPNAEKT 461
           P KP   P PA  K P WE  P +P A+ T
Sbjct: 130 PPKPADPPKPAALKKPPWEDDPDEPEADFT 159


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,998,025
Number of Sequences: 27780
Number of extensions: 284683
Number of successful extensions: 913
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 869
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 913
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)