Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_F_I18
(637 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF393492-1|AAL60417.1| 136|Apis mellifera odorant binding prote... 25 0.81
AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor ... 23 1.9
AB095514-1|BAC76336.1| 72|Apis mellifera ecdyson receptor prot... 23 1.9
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.5
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.5
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.5
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.5
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.5
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.5
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 23 2.5
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 23 2.5
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 23 3.3
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 22 5.7
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 21 7.6
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 21 7.6
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 21 7.6
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 21 7.6
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 21 7.6
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 21 7.6
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 21 7.6
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 21 7.6
AF393495-1|AAL60420.1| 136|Apis mellifera odorant binding prote... 21 7.6
>AF393492-1|AAL60417.1| 136|Apis mellifera odorant binding protein
ASP4 protein.
Length = 136
Score = 24.6 bits (51), Expect = 0.81
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +2
Query: 467 ASSDLSDIKSQYYADEQYPFLXKFDC 544
A DLSD+KS Y A+ + + KF C
Sbjct: 30 AGFDLSDLKSMYEANSEEQ-MKKFGC 54
>AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor A
isoform protein.
Length = 567
Score = 23.4 bits (48), Expect = 1.9
Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 3/29 (10%)
Frame = +3
Query: 261 FISRYILKNANI---YGDNCDFTVMKKRK 338
F R I KNA YG+NC+ + +RK
Sbjct: 210 FFRRSITKNAVYQCKYGNNCEIDMYMRRK 238
>AB095514-1|BAC76336.1| 72|Apis mellifera ecdyson receptor
protein.
Length = 72
Score = 23.4 bits (48), Expect = 1.9
Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 3/29 (10%)
Frame = +3
Query: 261 FISRYILKNANI---YGDNCDFTVMKKRK 338
F R I KNA YG+NC+ + +RK
Sbjct: 7 FFRRSITKNAVYQCKYGNNCEIDMYMRRK 35
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 23.0 bits (47), Expect = 2.5
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = -3
Query: 437 RLPNRHLVPSWCRNTF 390
R P+R+++PSW + F
Sbjct: 284 RTPDRYVMPSWIKMLF 299
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 23.0 bits (47), Expect = 2.5
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = -3
Query: 437 RLPNRHLVPSWCRNTF 390
R P+R+++PSW + F
Sbjct: 284 RTPDRYVMPSWIKMLF 299
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 23.0 bits (47), Expect = 2.5
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = -3
Query: 437 RLPNRHLVPSWCRNTF 390
R P+R+++PSW + F
Sbjct: 284 RTPDRYVMPSWIKMLF 299
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 23.0 bits (47), Expect = 2.5
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = -3
Query: 437 RLPNRHLVPSWCRNTF 390
R P+R+++PSW + F
Sbjct: 284 RTPDRYVMPSWIKMLF 299
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 23.0 bits (47), Expect = 2.5
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = -3
Query: 437 RLPNRHLVPSWCRNTF 390
R P+R+++PSW + F
Sbjct: 284 RTPDRYVMPSWIKMLF 299
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 23.0 bits (47), Expect = 2.5
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = -3
Query: 437 RLPNRHLVPSWCRNTF 390
R P+R+++PSW + F
Sbjct: 284 RTPDRYVMPSWIKMLF 299
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 23.0 bits (47), Expect = 2.5
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = -3
Query: 437 RLPNRHLVPSWCRNTF 390
R P+R+++PSW + F
Sbjct: 352 RTPDRYVMPSWIKMLF 367
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 23.0 bits (47), Expect = 2.5
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = -3
Query: 437 RLPNRHLVPSWCRNTF 390
R P+R+++PSW + F
Sbjct: 352 RTPDRYVMPSWIKMLF 367
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 22.6 bits (46), Expect = 3.3
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -1
Query: 394 LLGFIGTILFVTLMRLE 344
L+GFIG + F+ L LE
Sbjct: 877 LIGFIGNLTFLPLRSLE 893
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 21.8 bits (44), Expect = 5.7
Identities = 8/17 (47%), Positives = 8/17 (47%)
Frame = -1
Query: 211 NNQYPQKTQN*NYNPRC 161
NN Y N NYN C
Sbjct: 335 NNNYNNNNYNNNYNNNC 351
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 21.4 bits (43), Expect = 7.6
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = +2
Query: 65 ISDMFNFFTTDSPXKSKIYKILN 133
++ M NFFTT + +S + + N
Sbjct: 337 VTTMLNFFTTSNGFRSTLPVVSN 359
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 21.4 bits (43), Expect = 7.6
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = +2
Query: 65 ISDMFNFFTTDSPXKSKIYKILN 133
++ M NFFTT + +S + + N
Sbjct: 306 VTTMLNFFTTSNGFRSTLPVVSN 328
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 21.4 bits (43), Expect = 7.6
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = +2
Query: 65 ISDMFNFFTTDSPXKSKIYKILN 133
++ M NFFTT + +S + + N
Sbjct: 357 VTTMLNFFTTSNGFRSTLPVVSN 379
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 21.4 bits (43), Expect = 7.6
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = +2
Query: 65 ISDMFNFFTTDSPXKSKIYKILN 133
++ M NFFTT + +S + + N
Sbjct: 306 VTTMLNFFTTSNGFRSTLPVVSN 328
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 21.4 bits (43), Expect = 7.6
Identities = 8/17 (47%), Positives = 8/17 (47%)
Frame = -1
Query: 211 NNQYPQKTQN*NYNPRC 161
NN Y N NYN C
Sbjct: 93 NNNYKYNYNNNNYNNNC 109
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 21.4 bits (43), Expect = 7.6
Identities = 8/17 (47%), Positives = 8/17 (47%)
Frame = -1
Query: 211 NNQYPQKTQN*NYNPRC 161
NN Y N NYN C
Sbjct: 93 NNNYKYNYNNNNYNNNC 109
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 21.4 bits (43), Expect = 7.6
Identities = 8/17 (47%), Positives = 8/17 (47%)
Frame = -1
Query: 211 NNQYPQKTQN*NYNPRC 161
NN Y N NYN C
Sbjct: 93 NNNYKYNYNNNNYNNNC 109
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 21.4 bits (43), Expect = 7.6
Identities = 8/17 (47%), Positives = 8/17 (47%)
Frame = -1
Query: 211 NNQYPQKTQN*NYNPRC 161
NN Y N NYN C
Sbjct: 93 NNNYKYNYNNNNYNNNC 109
>AF393495-1|AAL60420.1| 136|Apis mellifera odorant binding protein
ASP4 protein.
Length = 136
Score = 21.4 bits (43), Expect = 7.6
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 5/56 (8%)
Frame = +2
Query: 467 ASSDLSDIKSQY--YADEQYPFLXKFDCTCREQYAGVGASTAQYHR---STRESLP 619
A DLSD+KS Y ++EQ L F+ ++ + +T + TRE P
Sbjct: 30 AGFDLSDLKSMYESNSEEQMKKLGCFEACVFQKLHFMDGNTLNVEKLESGTRELTP 85
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,284
Number of Sequences: 438
Number of extensions: 3301
Number of successful extensions: 26
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19071468
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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