Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_F_I11
(886 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 36 0.006
SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces pom... 36 0.008
SPAC1A6.07 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 33 0.071
SPBC649.04 |uvi15||UV-induced protein Uvi15|Schizosaccharomyces ... 32 0.094
SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster ... 32 0.094
SPBC23E6.09 |ssn6||transcriptional corepressor Ssn6|Schizosaccha... 31 0.17
SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein ... 31 0.22
SPBC3B8.02 |php5||CCAAT-binding factor complex subunit Php5|Schi... 31 0.29
SPAC6F6.02c |pof5||F-box protein Pof5|Schizosaccharomyces pombe|... 31 0.29
SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 30 0.38
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 30 0.50
SPAC24C9.07c |bgs2|meu21, pgs2|1,3-beta-glucan synthase subunit ... 30 0.50
SPAC17A5.10 |||conserved fungal protein|Schizosaccharomyces pomb... 30 0.50
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 29 0.88
SPAC22G7.09c |nup45||nucleoporin Nup45|Schizosaccharomyces pombe... 28 1.5
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 28 2.0
SPBC146.01 |med15|SPBP35G2.15|mediator complex subunit Med15 |Sc... 28 2.0
SPAC4G9.08c |rpc2||DNA-directed RNA polymerase III complex subun... 28 2.0
SPBC317.01 |mbx2|pvg4|MADS-box transcription factor Pvg4|Schizos... 27 2.7
SPBC30B4.04c |sol1||SWI/SNF complex subunit Sol1|Schizosaccharom... 27 2.7
SPCC1902.01 |gaf1|SPCC417.01c|transcription factor Gaf1 |Schizos... 27 2.7
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 27 2.7
SPAC26A3.12c |dhp1||5'-3' exoribonuclease Dhp1 |Schizosaccharomy... 27 4.7
SPBC27B12.08 |||AP-1 accessory protein |Schizosaccharomyces pomb... 26 6.2
SPAC3G9.14 |sak1||transcriptional repressor Sak1|Schizosaccharom... 26 6.2
SPBC1E8.02 |||ubiquitin family protein, unknown|Schizosaccharomy... 26 6.2
SPBC21B10.03c |||ataxin-2 homolog|Schizosaccharomyces pombe|chr ... 26 6.2
SPAC1327.01c ||SPAC1783.09c, SPAC18G6.16c|transcription factor, ... 26 8.2
SPBC23E6.01c ||SPBPJ758.01|RNA-binding protein, rrm type|Schizos... 26 8.2
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with
EF hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 36.3 bits (80), Expect = 0.006
Identities = 40/134 (29%), Positives = 53/134 (39%), Gaps = 11/134 (8%)
Frame = +1
Query: 136 GKIMFPNQQFPPNVGFNNLTPQSFSNTMNMQGSPAMRNPQVPGQGYPLPAQSAYPQP-GY 312
G + QQ G+N + PQ+ +NT MQ + +PG P P PQP G+
Sbjct: 83 GSVADYGQQQQQMYGYNGMMPQTMNNTGFMQ---PQQTGAIPGFA-PQPTGFVQPQPTGF 138
Query: 313 PIQQNQGY--PQSTAQ----YPTQGVPYPTHQ----NQGYPQSTAQYPTQGVPYPNHQSQ 462
QQ + PQ T P + P +Q N PQ T + Q + Q
Sbjct: 139 MSQQPASFMQPQRTGGAGFIQPQRTGAMPAYQPQMNNFMQPQKTGGFAPQATGFMQTQPF 198
Query: 463 GYPQSTAQYPTQGF 504
G S A PT GF
Sbjct: 199 GAAPSFAPQPT-GF 211
Score = 32.7 bits (71), Expect = 0.071
Identities = 34/116 (29%), Positives = 39/116 (33%), Gaps = 3/116 (2%)
Frame = +1
Query: 166 PPNVGFNNLTPQSFSNTMNMQGSPAMRNPQVPGQGYPLPAQSAYPQPGYPIQQNQGYPQS 345
P G + PQ M M+ PQ+PG P+ Q QP P Q+ PQ
Sbjct: 665 PQRTGMQPMAPQRTGMQPMMPQRTGMQ-PQMPGMQQPMAPQRTGMQPMMP-QRTGMQPQM 722
Query: 346 TA-QYPTQGVPYPTHQNQGYPQSTAQYP--TQGVPYPNHQSQGYPQSTAQYPTQGF 504
Q P P T PQ T P T G P PQ T GF
Sbjct: 723 PGMQQPM--APQRTGMQPMAPQRTGMQPQMTGGPMLPQRTGGMAPQPTGMPGQWGF 776
Score = 30.3 bits (65), Expect = 0.38
Identities = 25/82 (30%), Positives = 32/82 (39%), Gaps = 12/82 (14%)
Frame = +1
Query: 250 PQVPGQGYPLPAQSAYPQPGYPIQQ------NQGYPQ---STAQYPTQGVPYPTHQNQGY 402
P+ PG PA S+ P P P+ Q N P S AQ P V T +
Sbjct: 1460 PKAPGMVTNAPAPSSAPAPPAPVSQLPPAVPNVPVPSMIPSVAQQPPSSVAPATAPSSTL 1519
Query: 403 PQSTAQY---PTQGVPYPNHQS 459
P S + + P+ P P H S
Sbjct: 1520 PPSQSSFAHVPSPAPPAPQHPS 1541
Score = 27.9 bits (59), Expect = 2.0
Identities = 32/110 (29%), Positives = 36/110 (32%), Gaps = 1/110 (0%)
Frame = +1
Query: 166 PPNVGFNN-LTPQSFSNTMNMQGSPAMRNPQVPGQGYPLPAQSAYPQPGYPIQQNQGYPQ 342
P GF + PQ M M+ PQ+PG P+ Q QP P Q G Q
Sbjct: 549 PQMTGFQQPMAPQRTGMQPMMPQRTGMQ-PQMPGMQQPMAPQRTGMQPMMP--QRTGMQQ 605
Query: 343 STAQYPTQGVPYPTHQNQGYPQSTAQYPTQGVPYPNHQSQGYPQSTAQYP 492
A P T PQ T P P Q PQ T P
Sbjct: 606 PMA-------PQRTGMQPMMPQRTGMQPQM----PGMQQPMAPQRTGMQP 644
>SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 204
Score = 35.9 bits (79), Expect = 0.008
Identities = 26/92 (28%), Positives = 32/92 (34%)
Frame = +1
Query: 196 PQSFSNTMNMQGSPAMRNPQVPGQGYPLPAQSAYPQPGYPIQQNQGYPQSTAQYPTQGVP 375
P S ++ G P + A SA P P QN+ Y + YP QG
Sbjct: 50 PPSVDHSAPPSGPPPSYSNSAAPATPAASASSAAPAPAPAASQNRAYGAAPQPYPPQG-- 107
Query: 376 YPTHQNQGYPQSTAQYPTQGVPYPNHQSQGYP 471
GYPQ YP Q YP + P
Sbjct: 108 -------GYPQQPYYYPNQPNYYPAQPAYAQP 132
Score = 31.5 bits (68), Expect = 0.17
Identities = 24/78 (30%), Positives = 28/78 (35%), Gaps = 3/78 (3%)
Frame = +1
Query: 274 PLPAQSAYPQPGYPIQQNQGYPQSTAQYPTQGVPYPT---HQNQGYPQSTAQYPTQGVPY 444
P SA P P N P + A + P P QN+ Y + YP QG
Sbjct: 51 PSVDHSAPPSGPPPSYSNSAAPATPAASASSAAPAPAPAASQNRAYGAAPQPYPPQG--- 107
Query: 445 PNHQSQGYPQSTAQYPTQ 498
GYPQ YP Q
Sbjct: 108 ------GYPQQPYYYPNQ 119
>SPAC1A6.07 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 636
Score = 32.7 bits (71), Expect = 0.071
Identities = 31/86 (36%), Positives = 37/86 (43%), Gaps = 7/86 (8%)
Frame = +1
Query: 262 GQGYPLPAQSA-YPQPGYPIQQNQGYPQSTAQY-PTQGVPYPTHQNQGYPQSTAQYPTQ- 432
GQ PAQ Y Q P+Q Q QST + P Q + P Q Y S+ P Q
Sbjct: 356 GQNNNQPAQPGQYNQQSQPVQSYQS-GQSTQHFQPVQPI-QPVQSTQYYQPSSPVQPVQN 413
Query: 433 GVPYPNHQ----SQGYPQSTAQYPTQ 498
GVP P Q +Q Y S+ P Q
Sbjct: 414 GVPAPPMQPVQSTQYYQPSSPVQPVQ 439
>SPBC649.04 |uvi15||UV-induced protein Uvi15|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 87
Score = 32.3 bits (70), Expect = 0.094
Identities = 25/68 (36%), Positives = 28/68 (41%)
Frame = +1
Query: 157 QQFPPNVGFNNLTPQSFSNTMNMQGSPAMRNPQVPGQGYPLPAQSAYPQPGYPIQQNQGY 336
QQF + G+ PQ N P +N P QGY P YPQ GYP QQ
Sbjct: 4 QQFYGDKGYAPAPPQQAYGGPNYY--PPQQN--YPQQGYAPP--QGYPQGGYPAQQPMYV 57
Query: 337 PQSTAQYP 360
Q A P
Sbjct: 58 QQPQASDP 65
>SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster type
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 827
Score = 32.3 bits (70), Expect = 0.094
Identities = 32/123 (26%), Positives = 42/123 (34%), Gaps = 7/123 (5%)
Frame = +1
Query: 148 FPNQQFPPNVGFNNLTPQSFSNTMNMQGSPAMRNPQVPG--QGYPLPAQSAYPQPGYPIQ 321
+P Q P+ N+ P P VP P P ++YP P
Sbjct: 685 YPRQNGYPSYSDGNVYPHDRVMINYGSSMPTANGFYVPNTYSPVPFPYNTSYPPYMSPTS 744
Query: 322 QNQGYPQSTAQYPTQGVPYP-THQNQGYPQSTAQY----PTQGVPYPNHQSQGYPQSTAQ 486
Q+ +QYP Q P+P + Q P S G+PYP Q A
Sbjct: 745 NMPQAFQAYSQYPYQHPPFPLSEQMLPLPTSGVMMAPGAAKSGMPYPFIQPPSMTNQVA- 803
Query: 487 YPT 495
YPT
Sbjct: 804 YPT 806
>SPBC23E6.09 |ssn6||transcriptional corepressor
Ssn6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1102
Score = 31.5 bits (68), Expect = 0.17
Identities = 32/100 (32%), Positives = 40/100 (40%), Gaps = 2/100 (2%)
Frame = +1
Query: 139 KIMFPNQ--QFPPNVGFNNLTPQSFSNTMNMQGSPAMRNPQVPGQGYPLPAQSAYPQPGY 312
+++ P Q Q PPN+ PQ M P + + Q P Q PLP Q A P
Sbjct: 109 QVLQPQQYRQLPPNMVAATNAPQQHPQLQRMM--PILSSNQ-PIQQLPLPNQ-ASPYIPV 164
Query: 313 PIQQNQGYPQSTAQYPTQGVPYPTHQNQGYPQSTAQYPTQ 432
P+QQ Q QS Q Q + Q PQ Q Q
Sbjct: 165 PLQQQQ---QSQPQQQPQQQQHQQPQQPQPPQQPLQQQQQ 201
>SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein
Lsb1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 296
Score = 31.1 bits (67), Expect = 0.22
Identities = 21/72 (29%), Positives = 26/72 (36%), Gaps = 1/72 (1%)
Frame = +1
Query: 178 GFNNLTPQSFSNTMNMQGSPAMRNPQVPGQGYPLPAQSAYPQPGYPIQQNQGYPQSTAQY 357
G + P ++ + A P P Q YP A S+ P Y Q YP A Y
Sbjct: 184 GKEGIFPSNYVRLLEDSAVKAQPPPPPPQQNYPPAASSSAPPMQY---QQTAYPPQQAPY 240
Query: 358 P-TQGVPYPTHQ 390
P Q P Q
Sbjct: 241 PPVQAYPQAPQQ 252
>SPBC3B8.02 |php5||CCAAT-binding factor complex subunit
Php5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 415
Score = 30.7 bits (66), Expect = 0.29
Identities = 19/66 (28%), Positives = 25/66 (37%), Gaps = 5/66 (7%)
Frame = +1
Query: 274 PLPAQSAYPQPGYPIQQNQGYPQSTAQYPTQGVPYPTH-----QNQGYPQSTAQYPTQGV 438
P P Q+ P G+P+ P S Q + Y +H Q Q QS + G
Sbjct: 218 PFPTQAGLPNQGFPMPTGSQLPFSNQQSSQPSMQYSSHPSRMQQMQDIDQSMYKQQRLGS 277
Query: 439 PYPNHQ 456
YP Q
Sbjct: 278 EYPQLQ 283
>SPAC6F6.02c |pof5||F-box protein Pof5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 348
Score = 30.7 bits (66), Expect = 0.29
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +3
Query: 240 YEKPSSTRTGLSTTCSICLSSARLSYSAESRLSTKYCSIPDTGCSI 377
Y P +R+GL +C ++ +S A ST + SIP++G ++
Sbjct: 231 YPMPELSRSGLDCIFQLCPNATTISIPANYITSTAFESIPESGHNV 276
>SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 536
Score = 30.3 bits (65), Expect = 0.38
Identities = 19/54 (35%), Positives = 29/54 (53%)
Frame = +3
Query: 192 NSSIIQQYNEHARLSSYEKPSSTRTGLSTTCSICLSSARLSYSAESRLSTKYCS 353
+SS+ + + SSY S T +GLS++ SI S+ R S + +ST Y S
Sbjct: 141 SSSLSHSSSVPSSSSSYHSSSMTTSGLSSSASIVSSTYRDGPSIITLVSTSYVS 194
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 29.9 bits (64), Expect = 0.50
Identities = 25/101 (24%), Positives = 36/101 (35%), Gaps = 3/101 (2%)
Frame = +1
Query: 184 NNLTPQSFSNTMNMQGSPAMRNPQVPGQGYPLPAQSAYPQPGYPIQQNQGYPQSTAQYPT 363
+ T F+ T + S A P + S + G+ G P S+A P
Sbjct: 649 STFTSSGFNTTSGLPTSSA----STPSSNSSIVPTSTFTSSGF--NTTSGLPTSSASTPL 702
Query: 364 QG---VPYPTHQNQGYPQSTAQYPTQGVPYPNHQSQGYPQS 477
P T + G+ +T+ PT V P S YP S
Sbjct: 703 SNSTVAPTSTFTSSGF-NTTSGLPTSSVSTPLSNSSAYPSS 742
>SPAC24C9.07c |bgs2|meu21, pgs2|1,3-beta-glucan synthase subunit
Bgs2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1894
Score = 29.9 bits (64), Expect = 0.50
Identities = 20/77 (25%), Positives = 29/77 (37%), Gaps = 3/77 (3%)
Frame = +1
Query: 247 NPQVPGQGYPLPAQSAYPQPGYPIQQNQGYPQSTAQYPTQGVPYPTHQN---QGYPQSTA 417
N Q+P P+P Q YP + YP Y G + QG + +
Sbjct: 72 NQQIP---QPVPVQPRYPDEQNFSMNGETYPSEAYDYDYSGQEEAINAMNILQGNLERSN 128
Query: 418 QYPTQGVPYPNHQSQGY 468
+Y ++GVPY Y
Sbjct: 129 EYYSEGVPYSEEDLGAY 145
>SPAC17A5.10 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 224
Score = 29.9 bits (64), Expect = 0.50
Identities = 26/102 (25%), Positives = 39/102 (38%)
Frame = +1
Query: 196 PQSFSNTMNMQGSPAMRNPQVPGQGYPLPAQSAYPQPGYPIQQNQGYPQSTAQYPTQGVP 375
P S S+T+ + ++ + V G + +AY Q YP + T+Q P P
Sbjct: 38 PSSSSSTLPNYAASSLNSRPVSSSG----SGNAYSQAPYPPAR------PTSQRPNSWQP 87
Query: 376 YPTHQNQGYPQSTAQYPTQGVPYPNHQSQGYPQSTAQYPTQG 501
P ++ Y T PY Q PQS+ P G
Sbjct: 88 GNASTMYASPPPSSNYNTAKPPYQTSQFYARPQSSYAPPPSG 129
Score = 26.6 bits (56), Expect = 4.7
Identities = 25/91 (27%), Positives = 37/91 (40%)
Frame = +1
Query: 169 PNVGFNNLTPQSFSNTMNMQGSPAMRNPQVPGQGYPLPAQSAYPQPGYPIQQNQGYPQST 348
PN ++L + S++ + G+ + P P + P + QPG P S+
Sbjct: 46 PNYAASSLNSRPVSSSGS--GNAYSQAPYPPAR--PTSQRPNSWQPGNASTMYASPPPSS 101
Query: 349 AQYPTQGVPYPTHQNQGYPQSTAQYPTQGVP 441
Y T PY T Q PQS+ P G P
Sbjct: 102 -NYNTAKPPYQTSQFYARPQSSYAPPPSGRP 131
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 29.1 bits (62), Expect = 0.88
Identities = 25/110 (22%), Positives = 36/110 (32%), Gaps = 1/110 (0%)
Frame = +1
Query: 166 PPNVGFNNLTPQSFSNTMNMQGSPAMRNPQVPGQGYPLPAQSAYPQPGYP-IQQNQGYPQ 342
PPN + P S + +N P + P L A P P P ++N+G P
Sbjct: 267 PPNSPPRPIAPVSMNPAINSTSKPPLPPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPP 326
Query: 343 STAQYPTQGVPYPTHQNQGYPQSTAQYPTQGVPYPNHQSQGYPQSTAQYP 492
+P P + + P QG P ST + P
Sbjct: 327 IGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQP 376
>SPAC22G7.09c |nup45||nucleoporin Nup45|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 425
Score = 28.3 bits (60), Expect = 1.5
Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Frame = +1
Query: 244 RNPQVPGQGYPLPAQSAYPQ-PGYPIQQNQGYPQSTAQYPTQGVPYPTHQNQGYPQS 411
+NPQ G A + PQ PG QNQ Q PT G+ + QNQ Q+
Sbjct: 86 QNPQAAPGGSLFGASTTKPQAPGGLFNQNQTQAQPAQAAPTGGLFGLSGQNQTQSQT 142
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 27.9 bits (59), Expect = 2.0
Identities = 28/119 (23%), Positives = 41/119 (34%), Gaps = 3/119 (2%)
Frame = +1
Query: 151 PNQQFPPNVGFNNLTPQSFSNTMN-MQGSPAMRNPQVPGQGYPLPAQSAYPQPGYPIQQN 327
P + P + P + +MN M S + P+ P + P Q P+++
Sbjct: 942 PVTEPPVRASSVTVEPARVTESMNKMNISEEAKKPEAPSRPRTAPIPEPEEQKKAPVEKK 1001
Query: 328 QGYPQSTAQYPTQGVPYPTHQNQGY--PQSTAQYPTQGVPYPNHQSQGYPQSTAQYPTQ 498
A P Q T QN + PQ A P Q Y Q G+ + P Q
Sbjct: 1002 DAEKSVQAPIPAQPTGNITIQNAYFTAPQPMAADPFQSPLYV--QPTGFQPPPSALPIQ 1058
>SPBC146.01 |med15|SPBP35G2.15|mediator complex subunit Med15
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1063
Score = 27.9 bits (59), Expect = 2.0
Identities = 13/55 (23%), Positives = 19/55 (34%)
Frame = +1
Query: 196 PQSFSNTMNMQGSPAMRNPQVPGQGYPLPAQSAYPQPGYPIQQNQGYPQSTAQYP 360
P SN + GS P VPGQ P ++ +P+ + P
Sbjct: 754 PSVSSNVRPINGSIPNAQPSVPGQAQPAAKANSVGNTSFPVDSKLAFQSLDVSQP 808
>SPAC4G9.08c |rpc2||DNA-directed RNA polymerase III complex subunit
Rpc2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1165
Score = 27.9 bits (59), Expect = 2.0
Identities = 20/80 (25%), Positives = 35/80 (43%)
Frame = +1
Query: 559 GFRSQPGSIYGNQSHPPNQFGINQSRXXXXXXKSRPTVFPVNPFNPREDAGVLRKAMKGF 738
G R QPG IY N+ P N + + +S P+ P + G + K M
Sbjct: 847 GCRVQPGQIYVNKQTPTNALDNSITLGHTQTVESGYKATPMTYKAP--EPGYIDKVMLTT 904
Query: 739 GTDEKSIIQVLTKRSNEQRL 798
++++I+VL +++ L
Sbjct: 905 TDSDQTLIKVLMRQTRRPEL 924
>SPBC317.01 |mbx2|pvg4|MADS-box transcription factor
Pvg4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 372
Score = 27.5 bits (58), Expect = 2.7
Identities = 30/113 (26%), Positives = 40/113 (35%), Gaps = 13/113 (11%)
Frame = +1
Query: 151 PNQQFPPNVGFNNLTPQSFSNTMNMQGSPAMRNPQVPGQGYPLPAQSAYPQP-GYPIQQN 327
P Q P+ + P + N ++P PG PL S YP G+P +
Sbjct: 165 PTQHHHPHTRPPHHPPHPHFHNNNYPPPYCFQSPVSPGATVPLQHHSPYPSDNGFPGHRR 224
Query: 328 QG------YPQ-----STAQYPTQGVPYPTHQNQG-YPQSTAQYPTQGVPYPN 450
Q YPQ S Q PT + Q+Q Y Q P + PN
Sbjct: 225 QTHFAPYYYPQRATSPSLKQVPTYLGTHVLQQDQSTYDQKVLMPPASYLSSPN 277
>SPBC30B4.04c |sol1||SWI/SNF complex subunit
Sol1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 865
Score = 27.5 bits (58), Expect = 2.7
Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 3/32 (9%)
Frame = +1
Query: 334 YPQSTAQYPTQGVPYPTHQNQ-GYPQ--STAQ 420
YP + + YPTQG Y T + Q YPQ ST+Q
Sbjct: 12 YPTAVS-YPTQGQSYNTQEEQPAYPQRFSTSQ 42
>SPCC1902.01 |gaf1|SPCC417.01c|transcription factor Gaf1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 855
Score = 27.5 bits (58), Expect = 2.7
Identities = 28/101 (27%), Positives = 46/101 (45%)
Frame = +1
Query: 115 ISKDIGEGKIMFPNQQFPPNVGFNNLTPQSFSNTMNMQGSPAMRNPQVPGQGYPLPAQSA 294
IS + G + PNQ F P+V NN+ S +N + SP + Q PG +P S
Sbjct: 349 ISSPLSSG--VTPNQSFFPDVSGNNIFDVSRNN--HEVSSPLI---QSPGSYVSMP--SI 399
Query: 295 YPQPGYPIQQNQGYPQSTAQYPTQGVPYPTHQNQGYPQSTA 417
PI + P S +Q+P + + T+ ++ Q ++
Sbjct: 400 NMVSSLPI--SAPVPNSNSQFPRRPNTFRTNSSKSVGQGSS 438
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 27.5 bits (58), Expect = 2.7
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +1
Query: 235 PAMRNPQVPGQGYPLPAQSAYPQPGYPIQQNQGYP 339
P+ P +PG PLP + P PG P+ G P
Sbjct: 479 PSQNAPFIPGTSAPLPPTTFAP-PGVPLPPIPGAP 512
>SPAC26A3.12c |dhp1||5'-3' exoribonuclease Dhp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 991
Score = 26.6 bits (56), Expect = 4.7
Identities = 23/85 (27%), Positives = 33/85 (38%), Gaps = 3/85 (3%)
Frame = +1
Query: 190 LTPQSFSNTMNMQGSPAMRNPQVPGQGYPLPAQSAYPQPGYPIQQ---NQGYPQSTAQYP 360
LTP+ + + + RN G Y QS + Y Q Q Y T +
Sbjct: 862 LTPEDINQVRAERSFSSRRNN---GNSYRGGHQSYGVRRSYQSQSYSSRQSYTGVTNGFA 918
Query: 361 TQGVPYPTHQNQGYPQSTAQYPTQG 435
GV P N +P+S A Y ++G
Sbjct: 919 NGGVQPPWSGNGNFPRSNASYNSRG 943
>SPBC27B12.08 |||AP-1 accessory protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 1919
Score = 26.2 bits (55), Expect = 6.2
Identities = 15/66 (22%), Positives = 34/66 (51%)
Frame = +2
Query: 293 PILSPVILFSRIKAIHKVLLNTRHRVFHTLLTRIKAIHKVLLNTRHRVFHTLITRVKVIH 472
P + V LF+ +++V+++ + + ++ + A+ K+L + HT T + +
Sbjct: 1665 PAIVRVDLFATAMHVYEVIMDDQQLLKNSKQELLAALRKLLSTMVEQNDHTCTTLIYTLF 1724
Query: 473 KVLLNI 490
+ LLNI
Sbjct: 1725 EHLLNI 1730
>SPAC3G9.14 |sak1||transcriptional repressor
Sak1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 766
Score = 26.2 bits (55), Expect = 6.2
Identities = 21/68 (30%), Positives = 32/68 (47%)
Frame = +1
Query: 220 NMQGSPAMRNPQVPGQGYPLPAQSAYPQPGYPIQQNQGYPQSTAQYPTQGVPYPTHQNQG 399
N+Q +P+ P Q +PLP S Q P Q + S A P + V PT+ +Q
Sbjct: 261 NLQLAPSFAAP----QAHPLP--SHLSQSNVPPQLSHSSVPSPA--PPRSVSQPTYFSQP 312
Query: 400 YPQSTAQY 423
PQ ++ +
Sbjct: 313 MPQFSSSF 320
>SPBC1E8.02 |||ubiquitin family protein, unknown|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 603
Score = 26.2 bits (55), Expect = 6.2
Identities = 28/108 (25%), Positives = 43/108 (39%)
Frame = +1
Query: 172 NVGFNNLTPQSFSNTMNMQGSPAMRNPQVPGQGYPLPAQSAYPQPGYPIQQNQGYPQSTA 351
N G N +P SFS+ ++ + + V G PL S+ Q + QN+ +
Sbjct: 249 NSGLNPRSPNSFSSPLDNPALHTVDSTNVNGSLSPLSNSSSINQ----VHQNETHGS--- 301
Query: 352 QYPTQGVPYPTHQNQGYPQSTAQYPTQGVPYPNHQSQGYPQSTAQYPT 495
T VP P G P ++ P+ P P +Q ST P+
Sbjct: 302 ---TISVPNPNLSQMG-PSHSSSVPSNLSPNP---AQNENPSTTSIPS 342
>SPBC21B10.03c |||ataxin-2 homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 791
Score = 26.2 bits (55), Expect = 6.2
Identities = 25/100 (25%), Positives = 38/100 (38%), Gaps = 5/100 (5%)
Frame = +1
Query: 220 NMQGSPAMRNPQVPGQGYPLPAQSAYPQPGYPIQQNQGYPQSTAQYPTQGVP-----YPT 384
++Q + A P+ G A +A P + N P + YPT +P YP
Sbjct: 546 SLQQTIANSRPE-GNSGSAKKAAAANPMIPSIVLPNSAMPSAMPMYPTPTMPYIPVGYPV 604
Query: 385 HQNQGYPQSTAQYPTQGVPYPNHQSQGYPQSTAQYPTQGF 504
Y ++ +Q+ T P PN ST P G+
Sbjct: 605 PGYTPYMRNPSQH-TSVAPSPNGTPTSGNSSTVGSPMIGY 643
>SPAC1327.01c ||SPAC1783.09c, SPAC18G6.16c|transcription factor,
zf-fungal binuclear cluster type |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 977
Score = 25.8 bits (54), Expect = 8.2
Identities = 14/47 (29%), Positives = 20/47 (42%)
Frame = +3
Query: 207 QQYNEHARLSSYEKPSSTRTGLSTTCSICLSSARLSYSAESRLSTKY 347
Q YN R + +E ++ L ++C SAR S R S Y
Sbjct: 422 QSYNLFHRPTFFESLNNNTVPLVVVYAVCAVSARFSSRMHDRFSPPY 468
>SPBC23E6.01c ||SPBPJ758.01|RNA-binding protein, rrm
type|Schizosaccharomyces pombe|chr 2|||Manual
Length = 473
Score = 25.8 bits (54), Expect = 8.2
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = -2
Query: 405 WIALILVSRVWNTLCRVLSSTLWIALILLNRITGLRIG 292
W+ + +VWNTL + + L + NR TG+ G
Sbjct: 103 WVTEAFIQQVWNTLGKAVKVKL-----IRNRYTGMNAG 135
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,686,148
Number of Sequences: 5004
Number of extensions: 79953
Number of successful extensions: 340
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 284
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 328
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 444486180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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