Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_I08
         (843 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              25   1.2  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               24   2.0  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    22   6.2  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    22   6.2  
U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodops...    22   8.1  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +3

Query: 534 EKNPMNLWVPPDSDFYHDTNW 596
           +KNP+ LW  P  D     NW
Sbjct: 589 DKNPVQLWYVPSLDQVWILNW 609


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 23.8 bits (49), Expect = 2.0
 Identities = 12/23 (52%), Positives = 13/23 (56%)
 Frame = -3

Query: 391 PSHICCGVLTFFFFDILEQFTAL 323
           PSHI  G+L  FFF    Q  AL
Sbjct: 638 PSHIMAGLLDKFFFPKWLQVLAL 660


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +2

Query: 359 KCQDSTTDMGRGVICFGAFC*KH 427
           K  D  T +  G++ FGA+C  H
Sbjct: 405 KKYDCVTLLFSGIVGFGAYCAAH 427


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +2

Query: 359 KCQDSTTDMGRGVICFGAFC*KH 427
           K  D  T +  G++ FGA+C  H
Sbjct: 405 KKYDCVTLLFSGIVGFGAYCAAH 427


>U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodopsin
           protein.
          Length = 377

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +3

Query: 558 VPPDSDFYHDTNWY 599
           VPPD     D NWY
Sbjct: 29  VPPDMLHLIDANWY 42


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 227,810
Number of Sequences: 438
Number of extensions: 5307
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27067071
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)