Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_I07
         (524 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69976-1|CAA93816.1|  204|Anopheles gambiae ribosomal protein RL...   151   2e-38
AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein pr...    23   6.3  
CR954257-15|CAJ14166.1|  271|Anopheles gambiae predicted protein...    23   8.3  

>Z69976-1|CAA93816.1|  204|Anopheles gambiae ribosomal protein RL10
           protein.
          Length = 204

 Score =  151 bits (365), Expect = 2e-38
 Identities = 71/107 (66%), Positives = 83/107 (77%)
 Frame = +3

Query: 15  LQSIAEXXXXXXXXXXXXXSSYWVAQASSYKYFEVILVDPSHKAIRRDPKINWIVNAVHK 194
           LQS+AE             +SYWVAQ +++KYFEVI+VDP + AIRRDP +NWI NAVHK
Sbjct: 98  LQSVAEERVGGRLGGLRVLNSYWVAQDAAHKYFEVIMVDPPNNAIRRDPNVNWICNAVHK 157

Query: 195 HREMRGLTSAGRSSRGLGKGHRYSQTKGGSRRAAWLRRNTLQLRRKR 335
           HRE+RGLTSAG+SSRGLGK +RYSQT GGSRRAA +RRN L LRR R
Sbjct: 158 HRELRGLTSAGKSSRGLGKAYRYSQTIGGSRRAAGVRRNRLHLRRYR 204


>AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein
           protein.
          Length = 476

 Score = 23.0 bits (47), Expect = 6.3
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +3

Query: 237 RGLGKGHRYSQTKGGSRR 290
           +G+G GH Y   + G RR
Sbjct: 320 KGVGSGHLYYYEENGDRR 337


>CR954257-15|CAJ14166.1|  271|Anopheles gambiae predicted protein
           protein.
          Length = 271

 Score = 22.6 bits (46), Expect = 8.3
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +1

Query: 100 HTSISRLSSWTRHTRPFVA 156
           HT  + L  W R  +PFVA
Sbjct: 201 HTKTALLYLWGRFVQPFVA 219


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 448,267
Number of Sequences: 2352
Number of extensions: 7153
Number of successful extensions: 17
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 48205926
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)