Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_I05
         (544 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92833-5|CAK12560.1|  411|Caenorhabditis elegans Hypothetical pr...    29   1.6  
Z92833-4|CAK12559.1|  442|Caenorhabditis elegans Hypothetical pr...    29   1.6  
Z92833-3|CAB07378.1|  506|Caenorhabditis elegans Hypothetical pr...    29   1.6  
U51163-1|AAA96319.1|  506|Caenorhabditis elegans fork head/HNF-3...    29   1.6  
AF016428-6|AAK71396.2| 1733|Caenorhabditis elegans Hypothetical ...    27   8.7  
AC006671-6|AAF39916.1|  411|Caenorhabditis elegans Hypothetical ...    27   8.7  

>Z92833-5|CAK12560.1|  411|Caenorhabditis elegans Hypothetical
           protein F38A6.1c protein.
          Length = 411

 Score = 29.5 bits (63), Expect = 1.6
 Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 5/53 (9%)
 Frame = +2

Query: 149 ARHVKHPGHGFKGWFWA*HERCSHF--DGCR*RREKN---DETANQRKREDIN 292
           AR    PG   KG FW  HE C +   +GC  RR+K     E    RK+ + N
Sbjct: 203 ARSPDKPG---KGSFWTLHEHCGNMFENGCYLRRQKRFKVKEREPSRKKRNAN 252


>Z92833-4|CAK12559.1|  442|Caenorhabditis elegans Hypothetical
           protein F38A6.1b protein.
          Length = 442

 Score = 29.5 bits (63), Expect = 1.6
 Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 5/53 (9%)
 Frame = +2

Query: 149 ARHVKHPGHGFKGWFWA*HERCSHF--DGCR*RREKN---DETANQRKREDIN 292
           AR    PG   KG FW  HE C +   +GC  RR+K     E    RK+ + N
Sbjct: 234 ARSPDKPG---KGSFWTLHEHCGNMFENGCYLRRQKRFKVKEREPSRKKRNAN 283


>Z92833-3|CAB07378.1|  506|Caenorhabditis elegans Hypothetical
           protein F38A6.1a protein.
          Length = 506

 Score = 29.5 bits (63), Expect = 1.6
 Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 5/53 (9%)
 Frame = +2

Query: 149 ARHVKHPGHGFKGWFWA*HERCSHF--DGCR*RREKN---DETANQRKREDIN 292
           AR    PG   KG FW  HE C +   +GC  RR+K     E    RK+ + N
Sbjct: 298 ARSPDKPG---KGSFWTLHEHCGNMFENGCYLRRQKRFKVKEREPSRKKRNAN 347


>U51163-1|AAA96319.1|  506|Caenorhabditis elegans fork
           head/HNF-3-like protein protein.
          Length = 506

 Score = 29.5 bits (63), Expect = 1.6
 Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 5/53 (9%)
 Frame = +2

Query: 149 ARHVKHPGHGFKGWFWA*HERCSHF--DGCR*RREKN---DETANQRKREDIN 292
           AR    PG   KG FW  HE C +   +GC  RR+K     E    RK+ + N
Sbjct: 298 ARSPDKPG---KGSFWTLHEHCGNMFENGCYLRRQKRFKVKEREPSRKKRNAN 347


>AF016428-6|AAK71396.2| 1733|Caenorhabditis elegans Hypothetical
            protein T05C3.2 protein.
          Length = 1733

 Score = 27.1 bits (57), Expect = 8.7
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +1

Query: 256  RNC*SAKTGRYQPWISTSENSRLILFKKNSEF 351
            RNC S+++    PWI        +L+++N EF
Sbjct: 1243 RNCGSSQSQSQNPWIVGVMIDSFLLYRENCEF 1274


>AC006671-6|AAF39916.1|  411|Caenorhabditis elegans Hypothetical
           protein K08A2.1 protein.
          Length = 411

 Score = 27.1 bits (57), Expect = 8.7
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +2

Query: 116 KR*QFFAGKLNARHVKHPGHGFK 184
           KR   FAG +  RHV+ PGH  +
Sbjct: 371 KRDGMFAGDVLRRHVRSPGHALR 393


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,615,642
Number of Sequences: 27780
Number of extensions: 207714
Number of successful extensions: 546
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 517
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 546
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1091917214
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)