Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_H24
         (648 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    25   1.6  
EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calc...    25   2.7  
CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ...    25   2.7  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    24   4.8  
AB090819-1|BAC57913.1|  400|Anopheles gambiae gag-like protein p...    24   4.8  
CR954257-6|CAJ14157.1|  375|Anopheles gambiae RrnaAD, ribosomal ...    23   6.3  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    23   8.3  

>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 24/95 (25%), Positives = 41/95 (43%)
 Frame = +2

Query: 224  EKNPPEWEYVKRLLPFTTIPKIIPKDSYPSGWVPPKEEALNHPYFLSRTKNAELPIYLKI 403
            E +P     +K L   T + KI P   +  G + P   A      ++   N++  +    
Sbjct: 1452 EYDPDAKGRIKHLDVVTLLRKISPPLGF--GKLCPHRVACKRLVSMNMPLNSDGTVLFNA 1509

Query: 404  TYRGMRKISIIRKIEGDIWLLNDEIKQYLKQKNKR 508
            T   + + S+  K EG+I   N E++  +KQ  KR
Sbjct: 1510 TLFAVVRTSLKIKTEGNIDDANAELRNTIKQIWKR 1544


>EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calcium
           channel beta subunitprotein.
          Length = 466

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +2

Query: 335 EALNHPYFLSRTKNAELPIYLKI 403
           + +NHP  L++T  A   +YLKI
Sbjct: 336 DTINHPSQLAKTSLAPTIVYLKI 358


>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
           protein.
          Length = 1087

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 13/46 (28%), Positives = 23/46 (50%)
 Frame = +2

Query: 278 IPKIIPKDSYPSGWVPPKEEALNHPYFLSRTKNAELPIYLKITYRG 415
           +  ++PK+S P+G+        NHP+ L    N  L +++ I   G
Sbjct: 675 LESLLPKESEPAGFSLSATLFTNHPHRLEIIPNL-LRVFVSIEMTG 719


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 21/83 (25%), Positives = 36/83 (43%), Gaps = 6/83 (7%)
 Frame = +2

Query: 326 PKEEA---LNHPYFLSRTKNAELPIYLKITYRGMRKISIIRKIEGDIWLLNDEIKQYLKQ 496
           PK EA   L     L+RT+N ++  YL    R + +  + R     I   +DE    LK 
Sbjct: 289 PKTEAVEYLKQENTLTRTRNQQIQKYLCEQKRKIGEFEVERDQAAGILAKHDETYDALKA 348

Query: 497 ---KNKRYVETRVHEVARLIETK 556
              + ++ V+  + +   L+  K
Sbjct: 349 ERVEKEKLVKEEIKQYDELVSAK 371


>AB090819-1|BAC57913.1|  400|Anopheles gambiae gag-like protein
           protein.
          Length = 400

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 30/112 (26%), Positives = 54/112 (48%), Gaps = 3/112 (2%)
 Frame = +2

Query: 224 EKNPPEWEYVKRLLPFTTIPKIIPKDSYPSGWVPPKEEA---LNHPYFLSRTKNAELPIY 394
           +KN  + E+ + +  F  I K+  K SY       + EA   ++H   L R KN    + 
Sbjct: 9   KKNVEDEEHERLIEEF--ISKL--KKSYKKASKAEENEAPRKVSHKAQLERFKNYANNLE 64

Query: 395 LKITYRGMRKISIIRKIEGDIWLLNDEIKQYLKQKNKRYVETRVHEVARLIE 550
           ++    GM    +I  +E  I  ++ E+K+ LKQK+ + +E +  + + L E
Sbjct: 65  IEDLRDGMIA-QMIEFMESMIKEMS-ELKKQLKQKSTQEIEVQTAQPSELAE 114


>CR954257-6|CAJ14157.1|  375|Anopheles gambiae RrnaAD, ribosomal RNA
           adenine dimethylaseprotein.
          Length = 375

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 11/39 (28%), Positives = 21/39 (53%)
 Frame = +2

Query: 152 SKHYSSYGKSPFVRKIKEQYNYEIEKNPPEWEYVKRLLP 268
           SKH+  +  +   +K++  +   IE    EW Y+ R++P
Sbjct: 178 SKHFLPWCTTGGTKKLRTLHKKLIEDGAEEW-YLVRIVP 215


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -1

Query: 117 APKSSELFKIRPFFPTKSRANAECVR 40
           A K  EL ++RP +    R   EC R
Sbjct: 338 AEKEKELEQVRPRYEAMRRKEEECSR 363


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 666,471
Number of Sequences: 2352
Number of extensions: 13559
Number of successful extensions: 114
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 110
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 114
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63977715
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)